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3
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421
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Comment: Comment: STARsolo issue
10 days ago by dsull ★ 4.0k
0
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0
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310
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Comment: Comment: how to use tcga website with nmf
11 days ago by dsull ★ 4.0k
0
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0
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1.1k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
13 days ago by dsull ★ 4.0k
0
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1
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1.1k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
13 days ago by dsull ★ 4.0k
1
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1
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401
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Comment: Comment: 10X V3 library with only one fastq file
14 days ago by dsull ★ 4.0k
1
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0
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1.0k
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Comment: Comment: Get TPM from RNA counts and gene length?
18 days ago by dsull ★ 4.0k
3
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2
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1.1k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
22 days ago by dsull ★ 4.0k
1
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0
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1.1k
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Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
22 days ago by dsull ★ 4.0k
0
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0
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1.1k
views
Comment: Comment: How do one analyze data from SMART-Seq stranded kit (v4)?
23 days ago by dsull ★ 4.0k
1
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0
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1.0k
views
Comment: Comment: Get TPM from RNA counts and gene length?
4 weeks ago by dsull ★ 4.0k
1
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0
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251
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Comment: Comment: How to do differential expression without having replicates
4 weeks ago by dsull ★ 4.0k
1
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0
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643
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Comment: Comment: Aberrant splicing in bulk RNAseq
4 weeks ago by dsull ★ 4.0k
1
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1
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643
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Comment: Comment: Aberrant splicing in bulk RNAseq
5 weeks ago by dsull ★ 4.0k
3
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0
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700
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Comment: Comment: What are Differentially Expressed Genes ?!!
5 weeks ago by dsull ★ 4.0k
0
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1
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295
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Comment: Comment: How to summarize the expression of a gene when having expression data from diffe
6 weeks ago by dsull ★ 4.0k
0
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0
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1.4k
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Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
9 weeks ago by dsull ★ 4.0k
0
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0
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1.4k
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Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
9 weeks ago by dsull ★ 4.0k
0
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0
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602
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Comment: Comment: Is it possible to convert transcript-level to gene-level dataset to use it in DE
9 weeks ago by dsull ★ 4.0k
1
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0
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804
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Comment: Comment: How to get transcriptome reference?
12 weeks ago by dsull ★ 4.0k
1
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1
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1.3k
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Comment: Comment: downloading raw scRNA seq data from NCBI
12 weeks ago by dsull ★ 4.0k
0
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0
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1.3k
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Comment: Comment: downloading raw scRNA seq data from NCBI
12 weeks ago by dsull ★ 4.0k
0
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0
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1.0k
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Comment: Comment: A Computer Scientist who wants to start Bioinformatics
3 months ago by dsull ★ 4.0k
0
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0
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678
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Comment: Comment: is there any tool for SRA metadata analysis?
3 months ago by dsull ★ 4.0k
0
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1
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755
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Comment: Comment: Issues with chromosome file in kallisto
3 months ago by dsull ★ 4.0k
1
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1
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678
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Comment: Comment: is there any tool for SRA metadata analysis?
3 months ago by dsull ★ 4.0k
1
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0
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331
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Comment: Comment: Sleuth analysis with only using Kallisto abundance.tsv files no HDF5 files
3 months ago by dsull ★ 4.0k
0
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0
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627
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Comment: Comment: FPKM file differentilly gene anaylsis
3 months ago by dsull ★ 4.0k
2
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1
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728
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Comment: Comment: Building index with kallisto, keeps getting killed.
3 months ago by dsull ★ 4.0k
1
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0
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392
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Comment: Comment: Random forest with DE genes
3 months ago by dsull ★ 4.0k
1
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1
reply
836
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Comment: Comment: Can't convert SRA to FASTQ with fasterq-dump. fasterq-dump was killed (signal 9
3 months ago by dsull ★ 4.0k
0
votes
1
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375
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Comment: Comment: Tools for strand direction detection RNA-Seq
4 months ago by dsull ★ 4.0k
2
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0
replies
375
views
Comment: Comment: Tools for strand direction detection RNA-Seq
4 months ago by dsull ★ 4.0k
0
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1
reply
1.4k
views
Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
4 months ago by dsull ★ 4.0k
0
votes
0
replies
1.4k
views
Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
4 months ago by dsull ★ 4.0k
0
votes
0
replies
1.4k
views
Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
4 months ago by dsull ★ 4.0k
1
vote
1
reply
1.4k
views
Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
4 months ago by dsull ★ 4.0k
1
vote
1
reply
315
views
Comment: Comment: Should I skip trimming, and do deseq2 directly if fastqc only shows adapters.
4 months ago by dsull ★ 4.0k
0
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0
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1.0k
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Comment: Comment: How to choose parameters for kallisto single end mode?
4 months ago by dsull ★ 4.0k
0
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0
replies
1.0k
views
Comment: Comment: How to choose parameters for kallisto single end mode?
4 months ago by dsull ★ 4.0k
1
vote
1
reply
1.0k
views
Comment: Comment: How to choose parameters for kallisto single end mode?
4 months ago by dsull ★ 4.0k
1
vote
0
replies
554
views
Comment: Comment: Kallisto on identical transcript
5 months ago by dsull ★ 4.0k
1
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1
reply
311
views
Comment: Comment: Can you use kallisto to process GRO-seq data?
6 months ago by dsull ★ 4.0k
0
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0
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1.4k
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Comment: Comment: Kallisto bustools index
6 months ago by dsull ★ 4.0k
0
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0
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1.4k
views
Comment: Comment: Kallisto bustools index
6 months ago by dsull ★ 4.0k
0
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1
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297
views
Comment: Comment: Normalize and perform differential expression analysis for two sets of transcrip
6 months ago by dsull ★ 4.0k
1
vote
0
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423
views
Comment: Comment: Statistical exams in case of low replicate number in RNAseq analysis
7 months ago by dsull ★ 4.0k
2
votes
0
replies
972
views
Comment: Comment: How to interpret a tSNE or UMAP plot to get biological conclusions ?
7 months ago by dsull ★ 4.0k
1
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1
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972
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Comment: Comment: How to interpret a tSNE or UMAP plot to get biological conclusions ?
7 months ago by dsull ★ 4.0k
0
votes
0
replies
859
views
Comment: Comment: Understanding TCGA Pancancer data from cBioPortal
7 months ago by dsull ★ 4.0k
0
votes
0
replies
662
views
Comment: Comment: HT-seq CPTAC,RNA-seq
7 months ago by dsull ★ 4.0k
259 results • Page 1 of 6
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