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390
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Comment: Comment: "Simplifing" a very fragmented genome for visualisation?
6 weeks ago by Martombo ★ 2.9k
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1
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200
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Answer: Answer: featureCounts for WGS instead of RNA-seq
6 weeks ago by Martombo ★ 2.9k
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2
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909
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Answer: Answer: weird MAplot or volcano plot of DESeq2 diff result
9 weeks ago by Martombo ★ 2.9k
3
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1
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329
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Answer: Answer: My bioinformatics story
9 weeks ago by Martombo ★ 2.9k
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0
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456
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Comment: Comment: Manual annotation of cell types in single cell RNA-seq
10 weeks ago by Martombo ★ 2.9k
1
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1
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456
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Comment: Comment: Manual annotation of cell types in single cell RNA-seq
10 weeks ago by Martombo ★ 2.9k
1
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1
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611
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Answer: Answer: How do we process Kallisto output (continuous real values) for DESEQ2 analysis (
10 weeks ago by Martombo ★ 2.9k
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0
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306
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Comment: Comment: Why my knocked-out gene is not differentially expressed in RNA seq result?!
10 weeks ago by Martombo ★ 2.9k
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1
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306
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Answer: Answer: Why my knocked-out gene is not differentially expressed in RNA seq result?!
10 weeks ago by Martombo ★ 2.9k
0
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1
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222
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Comment: Comment: MapSplice2 gives error if the thread count (-p value) is greater than one
3 months ago by Martombo ★ 2.9k
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0
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260
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Comment: Comment: are there GO families?
3 months ago by Martombo ★ 2.9k
3
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1
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260
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Answer: Answer: are there GO families?
3 months ago by Martombo ★ 2.9k
1
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0
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1.0k
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Answer: Answer: Searching a venn diagram online tool
3 months ago by Martombo ★ 2.9k
1
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1
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595
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Answer: Answer: Tools for screening the influence/importance of covariates in multidimensional d
3 months ago by Martombo ★ 2.9k
0
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0
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439
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Comment: Comment: Samtools view does not output all reads
5 months ago by Martombo ★ 2.9k
0
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0
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439
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Comment: Comment: Samtools view does not output all reads
5 months ago by Martombo ★ 2.9k
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2
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439
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Answer: Answer: Samtools view does not output all reads
5 months ago by Martombo ★ 2.9k
0
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0
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397
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Comment: Comment: samtools idxstats unplaced contigs
6 months ago by Martombo ★ 2.9k
1
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1
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255
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Answer: A: Covariate correction which data take for downstream analysis?
7 months ago by Martombo ★ 2.9k
1
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1
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380
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Comment: C: How do I install Boost and the bjam build engine for Cufflinks
7 months ago by Martombo ★ 2.9k
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0
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287
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Comment: C: PCA plotting using DESEq2 pipeline
7 months ago by Martombo ★ 2.9k
0
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0
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1.3k
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Answer: A: minor introns database
10 months ago by Martombo ★ 2.9k
1
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2
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1.3k
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minor introns database
database minor introns
10 months ago by Martombo ★ 2.9k
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0
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1.5k
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Answer: C: Bowtie1 Options For Mirna
updated 10 months ago by 34k • written 7.6 years ago by ★ 2.9k
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0
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813
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Comment: C: GSEA pvalue output of 0.0. Can I make it more specific?
14 months ago by Martombo ★ 2.9k
0
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0
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505
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Comment: C: What to use for estimation of transcription factors' activity based on RNAseq da
18 months ago by Martombo ★ 2.9k
1
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0
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476
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Comment: C: RNAfold discriminant error
20 months ago by Martombo ★ 2.9k
0
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1
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476
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Comment: C: RNAfold discriminant error
20 months ago by Martombo ★ 2.9k
0
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0
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16k
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Comment: C: Calculate Percent Spliced In (PSI)
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.9k
0
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1
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16k
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Comment: C: Calculate Percent Spliced In (PSI)
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.9k
0
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1
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4.6k
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Comment: C: finding differentially expressed genes in three arm treatment RNA seq data
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.9k
0
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1
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4.6k
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Comment: C: finding differentially expressed genes in three arm treatment RNA seq data
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.9k
1
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1
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3.1k
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Comment: C: Extract expression data of candidate genes from normalized microarray list
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.9k
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1
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2.4k
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Comment: C: mirDup. MicroRNA prediction. java Error software
updated 22 months ago by 34k • written 7.4 years ago by ★ 2.9k
4
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1
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3.2k
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Answer: C: what is tAKR in the last of htseq results.
updated 22 months ago by 34k • written 7.5 years ago by ★ 2.9k
1
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0
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5.2k
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Answer: A: After run Cufflinks - cuffdiff there is no information about isoforms, TSS, CDS.
updated 22 months ago by 34k • written 7.5 years ago by ★ 2.9k
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0
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4.4k
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Comment: C: microRNA transcription start site prediction
updated 22 months ago by 34k • written 7.5 years ago by ★ 2.9k
4
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1
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4.4k
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Answer: A: microRNA transcription start site prediction
updated 22 months ago by 34k • written 7.5 years ago by ★ 2.9k
2
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0
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2.2k
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Comment: C: why tophat finds overlong introns?
updated 22 months ago by 34k • written 7.5 years ago by ★ 2.9k
4
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3
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2.2k
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Comment: C: RNA-Seq counts for all genes?
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.9k
3
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0
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21k
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Answer: A: Retrieving Fasta Sequences From Ncbi Using Biopython
updated 22 months ago by 34k • written 8.7 years ago by ★ 2.9k
1
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0
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12k
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Comment: C: htseq-count for pair-end RNA-seq
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.9k
2
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0
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5.0k
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Comment: C: HTSeq-count, problem in handling PE data
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.9k
1
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1
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5.0k
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Comment: C: HTSeq-count, problem in handling PE data
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.9k
0
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0
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45k
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Comment: C: matching and merging data frames of different lengths
updated 22 months ago by 34k • written 7.4 years ago by ★ 2.9k
0
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1
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45k
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Comment: C: matching and merging data frames of different lengths
updated 22 months ago by 34k • written 7.4 years ago by ★ 2.9k
0
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1
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582
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Answer: C: Interpretation problem at PCA plot for detecting batch effect
22 months ago by Martombo ★ 2.9k
1
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0
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671
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Comment: C: predicting 3D structure of protein from DNA sequence
23 months ago by Martombo ★ 2.9k
0
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0
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4.5k
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Comment: C: DESeq2 to analyse OTU differential abundance
updated 23 months ago by 34k • written 5.9 years ago by ★ 2.9k
0
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0
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2.9k
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Comment: C: Annotating RNA-Seq exon junctions
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.9k
326 results • Page 1 of 7
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