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797
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Comment: Comment: "Simplifing" a very fragmented genome for visualisation?
11 months ago by Martombo ★ 2.9k
1
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1
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397
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Answer: Answer: featureCounts for WGS instead of RNA-seq
11 months ago by Martombo ★ 2.9k
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2
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1.9k
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Answer: Answer: weird MAplot or volcano plot of DESeq2 diff result
12 months ago by Martombo ★ 2.9k
3
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1
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588
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Answer: Answer: My bioinformatics story
12 months ago by Martombo ★ 2.9k
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1.8k
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Comment: Comment: Manual annotation of cell types in single cell RNA-seq
12 months ago by Martombo ★ 2.9k
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1
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1.8k
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Comment: Comment: Manual annotation of cell types in single cell RNA-seq
12 months ago by Martombo ★ 2.9k
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1
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1.2k
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Answer: Answer: How do we process Kallisto output (continuous real values) for DESEQ2 analysis (
12 months ago by Martombo ★ 2.9k
0
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1
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366
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Comment: Comment: MapSplice2 gives error if the thread count (-p value) is greater than one
12 months ago by Martombo ★ 2.9k
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0
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460
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Comment: Comment: are there GO families?
13 months ago by Martombo ★ 2.9k
3
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1
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460
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Answer: Answer: are there GO families?
13 months ago by Martombo ★ 2.9k
1
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1.7k
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Answer: Answer: Searching a venn diagram online tool
13 months ago by Martombo ★ 2.9k
1
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1
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965
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Answer: Answer: Tools for screening the influence/importance of covariates in multidimensional d
13 months ago by Martombo ★ 2.9k
0
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0
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835
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Comment: Comment: Samtools view does not output all reads
15 months ago by Martombo ★ 2.9k
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0
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835
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Comment: Comment: Samtools view does not output all reads
15 months ago by Martombo ★ 2.9k
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2
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835
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Answer: Answer: Samtools view does not output all reads
15 months ago by Martombo ★ 2.9k
0
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0
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704
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Comment: Comment: samtools idxstats unplaced contigs
16 months ago by Martombo ★ 2.9k
1
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1
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687
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Answer: A: Covariate correction which data take for downstream analysis?
17 months ago by Martombo ★ 2.9k
1
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1
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749
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Comment: C: How do I install Boost and the bjam build engine for Cufflinks
17 months ago by Martombo ★ 2.9k
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0
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1.2k
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Comment: C: PCA plotting using DESEq2 pipeline
17 months ago by Martombo ★ 2.9k
0
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0
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1.4k
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Answer: Answer: minor introns database
updated 4 months ago by 36k • written 20 months ago by ★ 2.9k
1
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2
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1.4k
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minor introns database
database minor introns
updated 4 months ago by 36k • written 7.5 years ago by ★ 2.9k
0
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0
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1.7k
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Answer: C: Bowtie1 Options For Mirna
updated 20 months ago by 36k • written 8.4 years ago by ★ 2.9k
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0
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1.7k
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Comment: C: GSEA pvalue output of 0.0. Can I make it more specific?
2.0 years ago by Martombo ★ 2.9k
0
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0
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725
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Comment: C: What to use for estimation of transcription factors' activity based on RNAseq da
2.3 years ago by Martombo ★ 2.9k
1
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0
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684
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Comment: C: RNAfold discriminant error
2.5 years ago by Martombo ★ 2.9k
0
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1
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684
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Comment: C: RNAfold discriminant error
2.5 years ago by Martombo ★ 2.9k
0
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0
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18k
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Comment: C: Calculate Percent Spliced In (PSI)
updated 2.6 years ago by 36k • written 8.2 years ago by ★ 2.9k
0
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1
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18k
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Comment: C: Calculate Percent Spliced In (PSI)
updated 2.6 years ago by 36k • written 8.2 years ago by ★ 2.9k
0
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1
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5.2k
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Comment: C: finding differentially expressed genes in three arm treatment RNA seq data
updated 2.6 years ago by 36k • written 8.2 years ago by ★ 2.9k
0
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1
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5.2k
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Comment: C: finding differentially expressed genes in three arm treatment RNA seq data
updated 2.6 years ago by 36k • written 8.2 years ago by ★ 2.9k
1
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1
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3.4k
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Comment: C: Extract expression data of candidate genes from normalized microarray list
updated 2.6 years ago by 36k • written 8.2 years ago by ★ 2.9k
0
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1
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2.8k
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Comment: C: mirDup. MicroRNA prediction. java Error software
updated 2.6 years ago by 36k • written 8.3 years ago by ★ 2.9k
4
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1
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3.5k
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Answer: C: what is tAKR in the last of htseq results.
updated 2.6 years ago by 36k • written 8.3 years ago by ★ 2.9k
1
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0
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5.5k
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Answer: A: After run Cufflinks - cuffdiff there is no information about isoforms, TSS, CDS.
updated 2.6 years ago by 36k • written 8.3 years ago by ★ 2.9k
0
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0
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4.8k
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Comment: C: microRNA transcription start site prediction
updated 2.6 years ago by 36k • written 8.3 years ago by ★ 2.9k
4
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1
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4.8k
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Answer: A: microRNA transcription start site prediction
updated 2.6 years ago by 36k • written 8.3 years ago by ★ 2.9k
2
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0
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2.4k
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Comment: C: why tophat finds overlong introns?
updated 2.6 years ago by 36k • written 8.3 years ago by ★ 2.9k
4
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3
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2.4k
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Comment: C: RNA-Seq counts for all genes?
updated 2.7 years ago by 36k • written 6.6 years ago by ★ 2.9k
3
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0
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23k
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Answer: A: Retrieving Fasta Sequences From Ncbi Using Biopython
updated 2.7 years ago by 36k • written 9.5 years ago by ★ 2.9k
1
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0
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12k
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Comment: C: htseq-count for pair-end RNA-seq
updated 2.7 years ago by 36k • written 6.7 years ago by ★ 2.9k
2
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0
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5.5k
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Comment: C: HTSeq-count, problem in handling PE data
updated 2.7 years ago by 36k • written 6.7 years ago by ★ 2.9k
1
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1
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5.5k
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Comment: C: HTSeq-count, problem in handling PE data
updated 2.7 years ago by 36k • written 6.7 years ago by ★ 2.9k
0
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0
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47k
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Comment: C: matching and merging data frames of different lengths
updated 2.7 years ago by 36k • written 8.2 years ago by ★ 2.9k
0
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1
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47k
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Comment: C: matching and merging data frames of different lengths
updated 2.7 years ago by 36k • written 8.2 years ago by ★ 2.9k
0
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1
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877
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Answer: C: Interpretation problem at PCA plot for detecting batch effect
2.7 years ago by Martombo ★ 2.9k
1
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0
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857
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Comment: C: predicting 3D structure of protein from DNA sequence
2.7 years ago by Martombo ★ 2.9k
0
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0
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4.8k
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Comment: C: DESeq2 to analyse OTU differential abundance
updated 2.7 years ago by 36k • written 6.8 years ago by ★ 2.9k
0
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0
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3.2k
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Comment: C: Annotating RNA-Seq exon junctions
updated 2.7 years ago by 36k • written 6.8 years ago by ★ 2.9k
0
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1
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3.2k
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Answer: A: Annotating RNA-Seq exon junctions
updated 2.7 years ago by 36k • written 6.8 years ago by ★ 2.9k
1
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0
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3.6k
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Comment: C: Chip-seq mapping (using bowtie2 & tophat2) What's different ?
updated 2.7 years ago by 36k • written 6.8 years ago by ★ 2.9k
323 results • Page 1 of 7
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