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3
votes
1
reply
1.1k
views
Answer:
Answer: What does PCA results signify?
23 months ago by
Martombo
★ 3.1k
1
vote
0
replies
2.0k
views
Comment:
Comment: "Simplifing" a very fragmented genome for visualisation?
3.2 years ago by
Martombo
★ 3.1k
1
vote
1
reply
961
views
Answer:
Answer: featureCounts for WGS instead of RNA-seq
3.2 years ago by
Martombo
★ 3.1k
1
vote
2
replies
4.6k
views
Answer:
Answer: weird MAplot or volcano plot of DESeq2 diff result
3.2 years ago by
Martombo
★ 3.1k
3
votes
1
reply
1.1k
views
Answer:
Answer: My bioinformatics story
3.2 years ago by
Martombo
★ 3.1k
0
votes
0
replies
5.2k
views
Comment:
Comment: Manual annotation of cell types in single cell RNA-seq
3.2 years ago by
Martombo
★ 3.1k
1
vote
1
reply
5.2k
views
Comment:
Comment: Manual annotation of cell types in single cell RNA-seq
3.2 years ago by
Martombo
★ 3.1k
1
vote
1
reply
2.5k
views
Answer:
Answer: How do we process Kallisto output (continuous real values) for DESEQ2 analysis (
3.2 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.2k
views
Comment:
Comment: MapSplice2 gives error if the thread count (-p value) is greater than one
3.3 years ago by
Martombo
★ 3.1k
1
vote
0
replies
975
views
Comment:
Comment: are there GO families?
3.3 years ago by
Martombo
★ 3.1k
3
votes
1
reply
975
views
Answer:
Answer: are there GO families?
3.3 years ago by
Martombo
★ 3.1k
1
vote
0
replies
4.2k
views
Answer:
Answer: Searching a venn diagram online tool
3.3 years ago by
Martombo
★ 3.1k
1
vote
1
reply
2.0k
views
Answer:
Answer: Tools for screening the influence/importance of covariates in multidimensional d
3.3 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.9k
views
Comment:
Comment: Samtools view does not output all reads
3.5 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.9k
views
Comment:
Comment: Samtools view does not output all reads
3.5 years ago by
Martombo
★ 3.1k
0
votes
2
replies
1.9k
views
Answer:
Answer: Samtools view does not output all reads
3.5 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.5k
views
Comment:
Comment: samtools idxstats unplaced contigs
3.6 years ago by
Martombo
★ 3.1k
1
vote
1
reply
1.8k
views
Answer:
A: Covariate correction which data take for downstream analysis?
3.7 years ago by
Martombo
★ 3.1k
1
vote
1
reply
1.9k
views
Comment:
C: How do I install Boost and the bjam build engine for Cufflinks
3.7 years ago by
Martombo
★ 3.1k
0
votes
0
replies
4.2k
views
Comment:
C: PCA plotting using DESEq2 pipeline
3.7 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.9k
views
Answer:
Answer: minor introns database
updated 2.6 years ago by
Ram
44k • written 3.9 years ago by
Martombo
★ 3.1k
1
vote
2
replies
1.9k
views
minor introns database
database
minor introns
updated 2.6 years ago by
Ram
44k • written 9.8 years ago by
Martombo
★ 3.1k
0
votes
0
replies
2.1k
views
Answer:
C: Bowtie1 Options For Mirna
updated 3.9 years ago by
Ram
44k • written 10.7 years ago by
Martombo
★ 3.1k
0
votes
0
replies
3.6k
views
Comment:
C: GSEA pvalue output of 0.0. Can I make it more specific?
4.2 years ago by
Martombo
★ 3.1k
0
votes
0
replies
1.3k
views
Comment:
C: What to use for estimation of transcription factors' activity based on RNAseq da
4.6 years ago by
Martombo
★ 3.1k
1
vote
0
replies
1.4k
views
Comment:
C: RNAfold discriminant error
4.7 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.4k
views
Comment:
C: RNAfold discriminant error
4.7 years ago by
Martombo
★ 3.1k
0
votes
0
replies
20k
views
Comment:
C: Calculate Percent Spliced In (PSI)
updated 4.8 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
0
votes
1
reply
20k
views
Comment:
C: Calculate Percent Spliced In (PSI)
updated 4.8 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
0
votes
1
reply
6.4k
views
Comment:
C: finding differentially expressed genes in three arm treatment RNA seq data
updated 4.8 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
0
votes
1
reply
6.4k
views
Comment:
C: finding differentially expressed genes in three arm treatment RNA seq data
updated 4.8 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
1
vote
1
reply
4.3k
views
Comment:
C: Extract expression data of candidate genes from normalized microarray list
updated 4.8 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
0
votes
1
reply
3.6k
views
Comment:
C: mirDup. MicroRNA prediction. java Error software
updated 4.8 years ago by
Ram
44k • written 10.5 years ago by
Martombo
★ 3.1k
4
votes
1
reply
4.2k
views
Answer:
C: what is tAKR in the last of htseq results.
updated 4.9 years ago by
Ram
44k • written 10.5 years ago by
Martombo
★ 3.1k
1
vote
0
replies
6.5k
views
Answer:
A: After run Cufflinks - cuffdiff there is no information about isoforms, TSS, CDS.
updated 4.9 years ago by
Ram
44k • written 10.5 years ago by
Martombo
★ 3.1k
0
votes
0
replies
6.0k
views
Comment:
C: microRNA transcription start site prediction
updated 4.9 years ago by
Ram
44k • written 10.5 years ago by
Martombo
★ 3.1k
4
votes
1
reply
6.0k
views
Answer:
A: microRNA transcription start site prediction
updated 4.9 years ago by
Ram
44k • written 10.5 years ago by
Martombo
★ 3.1k
2
votes
0
replies
2.8k
views
Comment:
C: why tophat finds overlong introns?
updated 4.9 years ago by
Ram
44k • written 10.6 years ago by
Martombo
★ 3.1k
4
votes
3
replies
3.0k
views
Comment:
C: RNA-Seq counts for all genes?
updated 4.9 years ago by
Ram
44k • written 8.8 years ago by
Martombo
★ 3.1k
3
votes
0
replies
25k
views
Answer:
A: Retrieving Fasta Sequences From Ncbi Using Biopython
updated 4.9 years ago by
Ram
44k • written 11.7 years ago by
Martombo
★ 3.1k
1
vote
0
replies
13k
views
Comment:
C: htseq-count for pair-end RNA-seq
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
Martombo
★ 3.1k
2
votes
0
replies
6.3k
views
Comment:
C: HTSeq-count, problem in handling PE data
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
Martombo
★ 3.1k
1
vote
1
reply
6.3k
views
Comment:
C: HTSeq-count, problem in handling PE data
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
Martombo
★ 3.1k
0
votes
0
replies
50k
views
Comment:
C: matching and merging data frames of different lengths
updated 4.9 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
0
votes
1
reply
50k
views
Comment:
C: matching and merging data frames of different lengths
updated 4.9 years ago by
Ram
44k • written 10.4 years ago by
Martombo
★ 3.1k
0
votes
1
reply
1.5k
views
Answer:
C: Interpretation problem at PCA plot for detecting batch effect
4.9 years ago by
Martombo
★ 3.1k
1
vote
0
replies
1.3k
views
Comment:
C: predicting 3D structure of protein from DNA sequence
4.9 years ago by
Martombo
★ 3.1k
0
votes
0
replies
5.4k
views
Comment:
C: DESeq2 to analyse OTU differential abundance
updated 4.9 years ago by
Ram
44k • written 9.0 years ago by
Martombo
★ 3.1k
0
votes
0
replies
4.3k
views
Comment:
C: Annotating RNA-Seq exon junctions
updated 5.0 years ago by
Ram
44k • written 9.0 years ago by
Martombo
★ 3.1k
0
votes
1
reply
4.3k
views
Answer:
A: Annotating RNA-Seq exon junctions
updated 5.0 years ago by
Ram
44k • written 9.0 years ago by
Martombo
★ 3.1k
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