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Comment: C: How can I get .bed file that have unique Entrez gene id (or symbol) for deeptool
6.0 years ago by 1769mkc ★ 1.3k
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1
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21k
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Comment: C: Is There A Easy Way To Find The Gene Annotations For Features In Bed File?
6.0 years ago by 1769mkc ★ 1.3k
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1
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21k
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Comment: C: Is There A Easy Way To Find The Gene Annotations For Features In Bed File?
6.0 years ago by 1769mkc ★ 1.3k
0
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1
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21k
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Comment: C: Is There A Easy Way To Find The Gene Annotations For Features In Bed File?
6.0 years ago by 1769mkc ★ 1.3k
0
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0
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7.3k
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Comment: C: Can be merged biological replicates?
6.0 years ago by 1769mkc ★ 1.3k
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0
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7.6k
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Comment: C: peaks overlap: ATAC & CHIP seq
6.0 years ago by 1769mkc ★ 1.3k
0
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0
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18k
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Comment: C: ATAC-seq DE analysis
6.0 years ago by 1769mkc ★ 1.3k
0
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1
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18k
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Comment: C: ATAC-seq DE analysis
6.0 years ago by 1769mkc ★ 1.3k
0
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0
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18k
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Comment: C: ATAC-seq DE analysis
6.0 years ago by 1769mkc ★ 1.3k
0
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1
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18k
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Comment: C: ATAC-seq DE analysis
6.0 years ago by 1769mkc ★ 1.3k
0
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0
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5.9k
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Comment: C: deepTools cluster information?
6.0 years ago by 1769mkc ★ 1.3k
1
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0
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5.8k
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Comment: C: Pheatmap: Cluster columns on hclust object
6.0 years ago by 1769mkc ★ 1.3k
0
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0
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1.7k
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Comment: C: WGCNA: the export files of exportNetworkToCytoscape with hubgene lost
6.0 years ago by 1769mkc ★ 1.3k
0
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2
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5.9k
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Comment: C: deepTools cluster information?
6.0 years ago by 1769mkc ★ 1.3k
0
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0
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17k
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Comment: C: Parallel processing in R
6.1 years ago by 1769mkc ★ 1.3k
0
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1
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17k
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Comment: C: Parallel processing in R
6.1 years ago by 1769mkc ★ 1.3k
0
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1
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17k
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Comment: C: Parallel processing in R
6.1 years ago by 1769mkc ★ 1.3k
0
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0
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8.0k
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Comment: C: How to find p-value of the modules in WGCNA?
6.1 years ago by 1769mkc ★ 1.3k
0
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0
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4.4k
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Comment: C: WGCNA analysis in normal and tumor case
6.1 years ago by 1769mkc ★ 1.3k
0
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0
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2.0k
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Comment: C: Modular differential connectivity
6.1 years ago by 1769mkc ★ 1.3k
0
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1
reply
26k
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Comment: C: Clustering of DAVID gene enrichment results from gene expression studies
6.2 years ago by 1769mkc ★ 1.3k
0
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0
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2.5k
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Comment: C: Gene co-expression network construction
6.2 years ago by 1769mkc ★ 1.3k
1
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0
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2.6k
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Comment: C: Variability explained by a core of genes
6.2 years ago by 1769mkc ★ 1.3k
0
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1
reply
2.6k
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Comment: C: Variability explained by a core of genes
6.2 years ago by 1769mkc ★ 1.3k
0
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1
reply
20k
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Comment: C: Gene set enrichment analysis with logFC and PValue
6.3 years ago by 1769mkc ★ 1.3k
0
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0
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17k
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Comment: C: How to get data from GEO
6.3 years ago by 1769mkc ★ 1.3k
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0
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17k
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Comment: C: How to get data from GEO
6.3 years ago by 1769mkc ★ 1.3k
3
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0
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1.8k
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Answer: C: How to do the WGCNA in R
6.3 years ago by 1769mkc ★ 1.3k
0
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0
replies
49k
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Comment: C: Survival analysis with gene expression
6.3 years ago by 1769mkc ★ 1.3k
0
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1
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49k
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Comment: C: Survival analysis with gene expression
6.3 years ago by 1769mkc ★ 1.3k
0
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1
reply
17k
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Comment: C: Parallel processing in R
6.3 years ago by 1769mkc ★ 1.3k
1
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0
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9.1k
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Comment: C: Table browser +/- 2Kb of TSS export
6.4 years ago by 1769mkc ★ 1.3k
0
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0
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7.8k
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Comment: Comment: Making TSS plots for some genes for a particular histone mark
updated 3.1 years ago by 45k • written 6.4 years ago by ★ 1.3k
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0
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1.3k
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Comment: C: Relapse vs gene expression figure
6.4 years ago by 1769mkc ★ 1.3k
0
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1
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7.8k
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Comment: Comment: Making TSS plots for some genes for a particular histone mark
updated 3.1 years ago by 45k • written 6.4 years ago by ★ 1.3k
0
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2
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1.8k
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Answer: A: Average daraframe columns according to a corresponding vector.
6.4 years ago by 1769mkc ★ 1.3k
0
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0
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162k
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Comment: C: from .BAM to .BAI using samtools
6.4 years ago by 1769mkc ★ 1.3k
0
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1
reply
6.1k
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Comment: C: Visualisation of GO Terms
6.5 years ago by 1769mkc ★ 1.3k
0
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0
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13k
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Comment: C: HOMER annotatePeaks.pl problem
6.6 years ago by 1769mkc ★ 1.3k
0
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1
reply
13k
views
Comment: C: HOMER annotatePeaks.pl problem
6.6 years ago by 1769mkc ★ 1.3k
0
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0
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2.3k
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Comment: C: Gene and pseudogenes
6.6 years ago by 1769mkc ★ 1.3k
0
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1
reply
2.7k
views
Comment: C: WGNCA (correlation network): how can I incorporate mutant and wildtype into the
6.6 years ago by 1769mkc ★ 1.3k
0
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0
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41k
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Comment: C: Remove mitochondrial reads from BAM files
6.6 years ago by 1769mkc ★ 1.3k
0
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1
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6.9k
views
Comment: C: Running GSEA for DEGs
6.6 years ago by 1769mkc ★ 1.3k
2
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1
reply
11k
views
Answer: A: How to highlight certain genes in a Volcano Plot in R
6.6 years ago by 1769mkc ★ 1.3k
0
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0
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5.5k
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Comment: C: NGS plot error
6.6 years ago by 1769mkc ★ 1.3k
0
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2
replies
270k
views
Comment: C: Tools To Calculate Average Coverage For A Bam File?
6.6 years ago by 1769mkc ★ 1.3k
0
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1
reply
6.9k
views
Comment: C: PCAtools: everything Principal Components Analysis
6.6 years ago by 1769mkc ★ 1.3k
0
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0
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12k
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Comment: C: Calculate Pairwise Wilcox.Test For Several Categories And Plot Significance Into
6.6 years ago by 1769mkc ★ 1.3k
21
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14
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12k
views
Saving individual clusters from heatmaps
R
updated 6.6 years ago by ★ 1.2k • written 8.3 years ago by ★ 1.3k
828 results • Page 6 of 17
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