Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
5
votes
1
reply
9.3k
views
Answer: Answer: Different UMAP for batch correction in R and Pytho
5 weeks ago by antonioggsousa 3.4k
0
votes
0
replies
6.5k
views
Comment: Comment: How to get a legend from genoplotR?
5 weeks ago by antonioggsousa 3.4k
0
votes
0
replies
658
views
Comment: Comment: Help using ShinyCell2 and Seurat v5 object.
3 months ago by antonioggsousa 3.4k
0
votes
0
replies
546
views
Comment: Comment: Interactive UMAP scanpy
4 months ago by antonioggsousa 3.4k
0
votes
0
replies
918
views
Comment: Comment: Trouble Using GEO Files with Seurat
4 months ago by antonioggsousa 3.4k
2
votes
1
reply
918
views
Comment: Comment: Trouble Using GEO Files with Seurat
4 months ago by antonioggsousa 3.4k
0
votes
0
replies
891
views
Comment: Comment: Should I perform integration to correct batch effects?
4 months ago by antonioggsousa 3.4k
0
votes
1
reply
725
views
Comment: Comment: Scvi - Integration
4 months ago by antonioggsousa 3.4k
2
votes
2
replies
918
views
Answer: Answer: Trouble Using GEO Files with Seurat
4 months ago by antonioggsousa 3.4k
0
votes
0
replies
581
views
Comment: Comment: Y-axis break in Volcano Plot
4 months ago by antonioggsousa 3.4k
7
votes
1
reply
891
views
Answer: Answer: Should I perform integration to correct batch effects?
4 months ago by antonioggsousa 3.4k
0
votes
0
replies
940
views
Comment: Comment: Transferring Seurat Cluster Colours for scVelo analysis
15 months ago by antonioggsousa 3.4k
1
vote
1
reply
2.0k
views
Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
21 months ago by antonioggsousa 3.4k
0
votes
0
replies
2.0k
views
Comment: Comment: how to use multiple command in one line with using the output of last command to
22 months ago by antonioggsousa 3.4k
2
votes
0
replies
1.2k
views
Answer: Answer: Single cell visulaisation webtool
22 months ago by antonioggsousa 3.4k
3
votes
1
reply
3.4k
views
Answer: Answer: Can't do runPCA after merging a splited Seurat object before UMAP
23 months ago by antonioggsousa 3.4k
4
votes
1
reply
3.7k
views
Answer: Answer: Should I scale all genes in single cell Seurat?
23 months ago by antonioggsousa 3.4k
1
vote
0
replies
4.0k
views
Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
2.0 years ago by antonioggsousa 3.4k
0
votes
0
replies
2.5k
views
Answer: Answer: Monocle3 transition to seurat
2.0 years ago by antonioggsousa 3.4k
0
votes
1
reply
4.0k
views
Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
2.0 years ago by antonioggsousa 3.4k
1
vote
0
replies
1.2k
views
Answer: Answer: Using DADA2 for finding viral sequence variants
2.0 years ago by antonioggsousa 3.4k
1
vote
1
reply
2.8k
views
Comment: Comment: Cacoa with Seurat analysis
2.1 years ago by antonioggsousa 3.4k
0
votes
1
reply
2.0k
views
Comment: Comment: Phyloseq and ASV names between datasets
2.1 years ago by antonioggsousa 3.4k
0
votes
1
reply
2.8k
views
Answer: Answer: Cacoa with Seurat analysis
2.1 years ago by antonioggsousa 3.4k
0
votes
1
reply
2.8k
views
Comment: Comment: Cacoa with Seurat analysis
2.1 years ago by antonioggsousa 3.4k
2
votes
1
reply
6.8k
views
Comment: Comment: When should I NOT apply batch correction for my single-cell RNAseq data?
2.1 years ago by antonioggsousa 3.4k
10
votes
3
replies
6.8k
views
Answer: Answer: When should I NOT apply batch correction for my single-cell RNAseq data?
updated 2.1 years ago by 45k • written 2.1 years ago by 3.4k
0
votes
1
reply
2.8k
views
Comment: Comment: 18S taxonomy assignment SILVA database formatting
2.1 years ago by antonioggsousa 3.4k
1
vote
1
reply
2.8k
views
Answer: Answer: 18S taxonomy assignment SILVA database formatting
2.1 years ago by antonioggsousa 3.4k
0
votes
1
reply
2.8k
views
Comment: Comment: 18S taxonomy assignment SILVA database formatting
2.1 years ago by antonioggsousa 3.4k
0
votes
1
reply
2.8k
views
Comment: Comment: 18S taxonomy assignment SILVA database formatting
2.1 years ago by antonioggsousa 3.4k
1
vote
1
reply
1.3k
views
Comment: Comment: functional analysis applied on 16S rRNA Gene Metabarcoding data
2.1 years ago by antonioggsousa 3.4k
4
votes
0
replies
3.2k
views
Comment: Comment: Batch effect correction methods (Seurat v3, Harmony, fastMNN, Liger)
2.7 years ago by antonioggsousa 3.4k
1
vote
0
replies
3.4k
views
Comment: Comment: RDS file in Rstudio
2.7 years ago by antonioggsousa 3.4k
3
votes
1
reply
3.4k
views
Comment: Comment: RDS file in Rstudio
2.7 years ago by antonioggsousa 3.4k
0
votes
1
reply
3.4k
views
Comment: Comment: RDS file in Rstudio
2.7 years ago by antonioggsousa 3.4k
2
votes
1
reply
5.1k
views
Answer: Answer: DoHeatmap Seurat Edit Legend
2.8 years ago by antonioggsousa 3.4k
0
votes
0
replies
4.0k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
3.1 years ago by antonioggsousa 3.4k
1
vote
1
reply
4.0k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
3.1 years ago by antonioggsousa 3.4k
1
vote
1
reply
4.0k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
3.1 years ago by antonioggsousa 3.4k
0
votes
0
replies
6.1k
views
Comment: Comment: Multiple conditions DESeq2
3.1 years ago by antonioggsousa 3.4k
1
vote
1
reply
4.0k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
3.1 years ago by antonioggsousa 3.4k
2
votes
1
reply
4.0k
views
Answer: Answer: How to get parameter for cluster in scCATCH tool
3.1 years ago by antonioggsousa 3.4k
0
votes
0
replies
1.4k
views
Comment: Comment: CD4+ and CD8+ T cell classification
3.2 years ago by antonioggsousa 3.4k
0
votes
1
reply
1.4k
views
Comment: Comment: CD4+ and CD8+ T cell classification
3.2 years ago by antonioggsousa 3.4k
0
votes
1
reply
3.1k
views
Answer: Answer: Are there any tools that automatically detect where to truncate forward and reve
3.2 years ago by antonioggsousa 3.4k
0
votes
0
replies
2.0k
views
Comment: Comment: Is it required for all sequences to be same length when clustering OTUs in metag
3.2 years ago by antonioggsousa 3.4k
1
vote
1
reply
2.0k
views
Answer: Answer: Is it required for all sequences to be same length when clustering OTUs in metag
3.2 years ago by antonioggsousa 3.4k
0
votes
1
reply
1.7k
views
Comment: Comment: Does Seurat have Poisson normalization method?
3.2 years ago by antonioggsousa 3.4k
3
votes
1
reply
1.7k
views
Answer: Answer: Does Seurat have Pearson Residual (Poisson) normalization method?
3.2 years ago by antonioggsousa 3.4k
424 results • Page 1 of 9
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6