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Job: Bioinformatician @IGC - Portugal
bioinformatician facility
4.5 years ago by antonioggsousa 3.4k
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Comment: Comment: Which formula of Bray-Curtis beta diversity index should be used for microbiome
4.6 years ago by antonioggsousa 3.4k
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Answer: Answer: Which formula of Bray-Curtis beta diversity index should be used for microbiome
4.6 years ago by antonioggsousa 3.4k
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Answer: Answer: How can I get the Shannon and observed alpha diversity Index value?
4.6 years ago by antonioggsousa 3.4k
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Comment: C: metagenomics- read based diversity analysis
4.7 years ago by antonioggsousa 3.4k
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Comment: C: metagenomics- read based diversity analysis
4.7 years ago by antonioggsousa 3.4k
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Comment: C: metagenomics- read based diversity analysis
4.7 years ago by antonioggsousa 3.4k
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Comment: C: METAPHLAN: Relative abundance to read count
4.7 years ago by antonioggsousa 3.4k
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Comment: C: MEGA X ERROR MUSCLE Log file did not end properly
4.7 years ago by antonioggsousa 3.4k
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3.6k
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Comment: C: Extracting group-specific combinations from distance matrix
4.7 years ago by antonioggsousa 3.4k
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5.3k
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Comment: C: MEGA X ERROR MUSCLE Log file did not end properly
4.7 years ago by antonioggsousa 3.4k
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3.6k
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Comment: C: Extracting group-specific combinations from distance matrix
4.7 years ago by antonioggsousa 3.4k
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3.1k
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Comment: C: featureCounts - Low Assigned rate - Locations of reads
4.7 years ago by antonioggsousa 3.4k
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5.3k
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Comment: C: MEGA X ERROR MUSCLE Log file did not end properly
4.7 years ago by antonioggsousa 3.4k
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3.6k
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Answer: A: Extracting group-specific combinations from distance matrix
4.7 years ago by antonioggsousa 3.4k
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Comment: C: RSeQC confusing output - Half fails to determine, half is reverse strand
4.8 years ago by antonioggsousa 3.4k
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Comment: C: export edgeR normalised OTU table
4.8 years ago by antonioggsousa 3.4k
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Comment: C: export edgeR normalised OTU table
4.8 years ago by antonioggsousa 3.4k
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Comment: C: alpha diversity metrics for relative frequency data
4.8 years ago by antonioggsousa 3.4k
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Comment: C: 16S Rrna Sequencing In Industry Applications
4.8 years ago by antonioggsousa 3.4k
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Comment: C: problem with setting up uniprot database for Diamond BLAST
4.8 years ago by antonioggsousa 3.4k
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Comment: C: problem with setting up uniprot database for Diamond BLAST
4.8 years ago by antonioggsousa 3.4k
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Comment: C: problem with setting up uniprot database for Diamond BLAST
4.8 years ago by antonioggsousa 3.4k
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Comment: C: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
4.8 years ago by antonioggsousa 3.4k
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Answer: C: Qualimap: java.lang.RuntimeException: The raw data doesn't exist for sample ?
4.8 years ago by antonioggsousa 3.4k
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1.2k
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Comment: C: fastqc output analysis
4.8 years ago by antonioggsousa 3.4k
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Comment: C: Using STAR to map fastq files: EXITING: because of fatal INPUT ERROR: number of
4.8 years ago by antonioggsousa 3.4k
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Comment: C: Using STAR to map fastq files: EXITING: because of fatal INPUT ERROR: number of
4.8 years ago by antonioggsousa 3.4k
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Comment: C: Using STAR to map fastq files: EXITING: because of fatal INPUT ERROR: number of
4.8 years ago by antonioggsousa 3.4k
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Comment: C: picard sortsam error
4.8 years ago by antonioggsousa 3.4k
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Comment: C: mRNA Translation: TGG/UGG as a start codon?
4.8 years ago by antonioggsousa 3.4k
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Answer: C: Expected a file with 2 fields per line. GenomicsDBImport from GATK ?
4.8 years ago by antonioggsousa 3.4k
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Comment: C: mRNA Translation: TGG/UGG as a start codon?
4.8 years ago by antonioggsousa 3.4k
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3.8k
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Comment: C: mRNA Translation: TGG/UGG as a start codon?
4.8 years ago by antonioggsousa 3.4k
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3.9k
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Comment: C: Hisat2 / (ERR): hisat2-align exited with value 1
4.8 years ago by antonioggsousa 3.4k
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Comment: C: mRNA Translation: TGG/UGG as a start codon?
4.8 years ago by antonioggsousa 3.4k
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Comment: C: separate_rows, but keep related ones together
4.8 years ago by antonioggsousa 3.4k
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Answer: C: separate_rows, but keep related ones together
4.8 years ago by antonioggsousa 3.4k
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2.9k
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Comment: C: picard sortsam error
4.8 years ago by antonioggsousa 3.4k
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Comment: C: picard sortsam error
4.8 years ago by antonioggsousa 3.4k
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2.9k
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Comment: C: picard sortsam error
4.8 years ago by antonioggsousa 3.4k
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2.9k
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Comment: C: picard sortsam error
4.8 years ago by antonioggsousa 3.4k
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2.9k
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picard sortsam error
alignment Assembly next-gen software error
updated 4.8 years ago by 166k • written 4.8 years ago by 3.4k
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2.6k
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Comment: C: paired end metagenomics analysis
4.8 years ago by antonioggsousa 3.4k
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Comment: C: How to check if a Fastq file is contaminated with other strains?
4.8 years ago by antonioggsousa 3.4k
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Comment: C: Labeling Clusters in ggplot
4.8 years ago by antonioggsousa 3.4k
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Answer: A: Trimmomatic MINLEN option doesn't work
4.8 years ago by antonioggsousa 3.4k
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Comment: C: FASTQC after trimming: how do I know if it is good enough to proceed to alignmen
4.9 years ago by antonioggsousa 3.4k
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Comment: C: How to zoom in the pic of tree plotted by function dotTree in R?
4.9 years ago by antonioggsousa 3.4k
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4.0k
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Answer: A: Greengenes OTU ID
4.9 years ago by antonioggsousa 3.4k
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