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2
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0
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224
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Answer: Answer: Pie Charts: to use or not to use
2 days ago by Bastien Hervé 6.3k
1
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1
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425
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Comment: Comment: Single cell expression and accessibility integration using cellxgene data
3 days ago by Bastien Hervé 6.3k
2
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0
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236
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Answer: Answer: Regressing variables for finding Differentially expressed genes
3 days ago by Bastien Hervé 6.3k
0
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1
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425
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Comment: Comment: Single cell expression and accessibility integration using cellxgene data
3 days ago by Bastien Hervé 6.3k
2
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0
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256
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Answer: Answer: GSEA and Cytoscape Enrichment maps
3 days ago by Bastien Hervé 6.3k
2
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1
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561
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Comment: Comment: Circular heatmap using circos.heatmap in R
10 days ago by Bastien Hervé 6.3k
0
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1
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561
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Comment: Comment: Circular heatmap using circos.heatmap in R
10 days ago by Bastien Hervé 6.3k
3
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1
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561
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Answer: Answer: Circular heatmap using circos.heatmap in R
11 days ago by Bastien Hervé 6.3k
0
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0
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593
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Comment: Comment: Ggplot make boxplots more wide
12 days ago by Bastien Hervé 6.3k
1
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1
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593
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Comment: Comment: Ggplot make boxplots more wide
12 days ago by Bastien Hervé 6.3k
0
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0
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309
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Comment: Comment: Accessible color palettes for charts and dataviz
13 days ago by Bastien Hervé 6.3k
0
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0
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448
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Comment: Comment: Differeces between Seurat::RunPCA and scater::runPCA affect downstream analyses
15 days ago by Bastien Hervé 6.3k
0
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1
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448
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Answer: Answer: Differeces between Seurat::RunPCA and scater::runPCA affect downstream analyses
16 days ago by Bastien Hervé 6.3k
1
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2
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518
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Comment: Comment: Different number of fragments after doublets removal in each run
4 weeks ago by Bastien Hervé 6.3k
0
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1
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423
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Comment: Comment: DEG analysys using pseudobulk from single cell RNA-seq
6 weeks ago by Bastien Hervé 6.3k
0
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0
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418
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Comment: Comment: Assign different color in same section of Chord diagram in R
6 weeks ago by Bastien Hervé 6.3k
0
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1
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418
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Comment: Comment: Assign different color in same section of Chord diagram in R
6 weeks ago by Bastien Hervé 6.3k
0
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0
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1.9k
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Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
7 weeks ago by Bastien Hervé 6.3k
1
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1
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1.2k
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Comment: Comment: Reproducibility Crisis
7 weeks ago by Bastien Hervé 6.3k
1
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3
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1.2k
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Comment: Comment: Reproducibility Crisis
7 weeks ago by Bastien Hervé 6.3k
1
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1
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1.2k
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Comment: Comment: Reproducibility Crisis
7 weeks ago by Bastien Hervé 6.3k
0
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0
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665
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Comment: Comment: Tool for automatic immune cell annotation in MOUSE?
8 weeks ago by Bastien Hervé 6.3k
0
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0
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352
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Comment: Comment: Understanding sctransform
9 weeks ago by Bastien Hervé 6.3k
1
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1
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348
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Comment: Comment: single cell compositional analysis - how adjusting for covariates (age)
9 weeks ago by Bastien Hervé 6.3k
1
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1
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354
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Comment: Comment: PLINK 1.07 Segmentation fault (core dumped)
10 weeks ago by Bastien Hervé 6.3k
0
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1
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438
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Comment: Comment: Difference in reads per cell between samples
10 weeks ago by Bastien Hervé 6.3k
0
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1
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438
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Answer: Answer: Difference in reads per cell between samples
10 weeks ago by Bastien Hervé 6.3k
0
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0
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251
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Comment: Comment: Assistance Required: Error with MuSiC2 Package - "pVar" Function Not Found
10 weeks ago by Bastien Hervé 6.3k
0
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0
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481
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Comment: Comment: What is indicated by the red dotted lines in the `tiny_10x_pbmc.pdf` out put fro
3 months ago by Bastien Hervé 6.3k
0
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0
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706
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Answer: Answer: Multiple fail points in fastqc file
3 months ago by Bastien Hervé 6.3k
0
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0
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405
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Comment: Comment: The Biostar Herald for Monday, February 10, 2025
3 months ago by Bastien Hervé 6.3k
0
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0
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311
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Answer: Answer: How to obtain spliced and unspliced counts from parse biosciences generated coun
3 months ago by Bastien Hervé 6.3k
1
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0
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878
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Comment: Comment: Loading VisiumHD dataset
3 months ago by Bastien Hervé 6.3k
0
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1
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878
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Comment: Comment: Loading VisiumHD dataset
3 months ago by Bastien Hervé 6.3k
1
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1
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605
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Comment: Comment: Differential Expression Analysis in single-cell data
3 months ago by Bastien Hervé 6.3k
0
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1
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605
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Comment: Comment: Differential Expression Analysis in single-cell data
3 months ago by Bastien Hervé 6.3k
1
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1
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605
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Comment: Comment: Differential Expression Analysis in single-cell data
3 months ago by Bastien Hervé 6.3k
1
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0
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419
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Comment: Comment: How can I add new column into Metadata of Seurat.obj in Xenium analysis
3 months ago by Bastien Hervé 6.3k
0
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0
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269
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ArchR extending gene activity till nearest promoter
ArchR addGeneScoreMat
3 months ago by Bastien Hervé 6.3k
1
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1
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915
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Answer: Answer: single-cell zeros handling, inputation and filtration
4 months ago by Bastien Hervé 6.3k
0
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0
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561
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Comment: Comment: making a circos for snps indels and SV
4 months ago by Bastien Hervé 6.3k
2
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1
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851
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Comment: Comment: single-cell data: Batch effects still there after integration
4 months ago by Bastien Hervé 6.3k
2
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1
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851
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Comment: Comment: single-cell data: Batch effects still there after integration
4 months ago by Bastien Hervé 6.3k
1
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1
reply
1.1k
views
Comment: Comment: Unable to integrate separately SCTransformed scRNAseq Seurat Objects
5 months ago by Bastien Hervé 6.3k
1
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1
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1.1k
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Comment: Comment: Unable to integrate separately SCTransformed scRNAseq Seurat Objects
5 months ago by Bastien Hervé 6.3k
0
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0
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529
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Comment: Comment: WarningNAs produced by integer overflow error using SCTransform
5 months ago by Bastien Hervé 6.3k
0
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1
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618
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Comment: Comment: Extract aligned positions from reads
5 months ago by Bastien Hervé 6.3k
0
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1
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1.3k
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Comment: Comment: Which method should I use to merge scRNA-seq data, Cellranger aggr or Seurat?
5 months ago by Bastien Hervé 6.3k
0
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0
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1.1k
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Comment: Comment: Single-cell dimensionality reduction and clustering
5 months ago by Bastien Hervé 6.3k
0
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1
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1.1k
views
Comment: Comment: Single-cell dimensionality reduction and clustering
5 months ago by Bastien Hervé 6.3k
961 results • Page 1 of 20
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