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0
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Comment: C: Replace the bases with N for the sites with evidence of a SNP
6.2 years ago by Prakki Rama ★ 2.7k
1
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3
replies
1.8k
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Filtering VCF file
SNP vcf filtering
updated 6.3 years ago by 20 • written 6.4 years ago by ★ 2.7k
1
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0
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8.1k
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Comment: C: Annotating/Finding "NNNNNN" scaffold gaps in genome assembly
6.4 years ago by Prakki Rama ★ 2.7k
1
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1
reply
6.8k
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Comment: C: How to extract all non-seqenced positions from a genome (Fasta file)?
6.4 years ago by Prakki Rama ★ 2.7k
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0
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14k
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Comment: C: How do I access genome coverage using SPADES?
6.6 years ago by Prakki Rama ★ 2.7k
2
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0
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11k
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Answer: A: Remove Header from SAM - File
updated 6.7 years ago by 45k • written 11.1 years ago by ★ 2.7k
0
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0
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1.9k
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Comment: C: Error using in Smalt aligner program
6.8 years ago by Prakki Rama ★ 2.7k
2
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1
reply
26k
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Comment: C: Tool for calculating sequence statistic values (e.g. N50) for multiple bins
6.8 years ago by Prakki Rama ★ 2.7k
0
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1
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4.7k
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Comment: C: Missing sequences in local NT database
6.9 years ago by Prakki Rama ★ 2.7k
2
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1
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4.7k
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Comment: C: Missing sequences in local NT database
6.9 years ago by Prakki Rama ★ 2.7k
0
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0
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4.7k
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Comment: C: Missing sequences in local NT database
6.9 years ago by Prakki Rama ★ 2.7k
0
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1
reply
4.7k
views
Comment: C: Missing sequences in local NT database
6.9 years ago by Prakki Rama ★ 2.7k
1
vote
1
reply
4.7k
views
Comment: C: Missing sequences in local NT database
6.9 years ago by Prakki Rama ★ 2.7k
1
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0
replies
4.7k
views
Comment: C: Missing sequences in local NT database
6.9 years ago by Prakki Rama ★ 2.7k
12
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33
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4.7k
views
Missing sequences in local NT database
nt blast ncbi blastdbcmd
updated 6.9 years ago by 15k • written 6.9 years ago by ★ 2.7k
1
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0
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44k
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Comment: C: How To Retrieve Genbank Records With Range Of Accession Numbers
7.0 years ago by Prakki Rama ★ 2.7k
0
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1
reply
3.6k
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Comment: C: Standalone BLAST error: UnexpectedTagClassByte
7.0 years ago by Prakki Rama ★ 2.7k
0
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0
replies
7.5k
views
Answer: A: Post Your Prefered Bioinformatics Short Code
updated 7.0 years ago by 45k • written 10.4 years ago by ★ 2.7k
78
votes
22
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25k
views
14 follow
Assessing The Quality Of De Novo Assembled Data
assembly next-gen
updated 3.0 years ago by 45k • written 13.2 years ago by ★ 2.7k
0
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0
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42k
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Comment: C: Fetching Genbank Entries For List Of Accession Numbers.
7.2 years ago by Prakki Rama ★ 2.7k
1
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1
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5.7k
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Comment: C: Assigning subject to query based on coverage from blast output file
7.2 years ago by Prakki Rama ★ 2.7k
0
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0
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7.9k
views
Comment: C: How To Replace Sequence Id'S In A Text (Tree) File With Taxonomy Strings From A
7.2 years ago by Prakki Rama ★ 2.7k
0
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0
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2.4k
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Comment: C: Search only plasmids from NT database using local BLAST
7.3 years ago by Prakki Rama ★ 2.7k
0
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1
reply
2.4k
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Comment: C: Search only plasmids from NT database using local BLAST
7.3 years ago by Prakki Rama ★ 2.7k
1
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4
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2.4k
views
Search only plasmids from NT database using local BLAST
Assembly ncbi nt plasmid
7.3 years ago by Prakki Rama ★ 2.7k
0
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0
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6.1k
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Comment: C: Finding Plasmids
7.3 years ago by Prakki Rama ★ 2.7k
0
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0
replies
41k
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Comment: C: how to convert a long fasta-file into many separate single fasta sequences
7.6 years ago by Prakki Rama ★ 2.7k
0
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0
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6.9k
views
Comment: C: Allele Depth (~ Dp4) Values For All (Including Multi-Allelic Alt) Possible Allel
7.6 years ago by Prakki Rama ★ 2.7k
0
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0
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6.0k
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Comment: C: Tune criteria for extraction of consensus sequence from bam/sam alignment
7.6 years ago by Prakki Rama ★ 2.7k
1
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0
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8.7k
views
Answer: A: Removing Gapped Columns From A Multiple Sequence Alignment.
7.6 years ago by Prakki Rama ★ 2.7k
0
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0
replies
2.5k
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Comment: C: remove gapped bases in MSA
7.6 years ago by Prakki Rama ★ 2.7k
0
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0
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6.0k
views
Comment: C: Tune criteria for extraction of consensus sequence from bam/sam alignment
7.6 years ago by Prakki Rama ★ 2.7k
0
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1
reply
6.0k
views
Comment: C: Tune criteria for extraction of consensus sequence from bam/sam alignment
7.6 years ago by Prakki Rama ★ 2.7k
0
votes
1
reply
6.0k
views
Comment: C: Tune criteria for extraction of consensus sequence from bam/sam alignment
7.6 years ago by Prakki Rama ★ 2.7k
0
votes
1
reply
1.5k
views
Comment: C: Parameter to check atleast 75% consensus of each nucleotide
7.7 years ago by Prakki Rama ★ 2.7k
1
vote
3
replies
1.5k
views
Parameter to check atleast 75% consensus of each nucleotide
snp alignment genome
updated 7.7 years ago by ★ 3.0k • written 7.7 years ago by ★ 2.7k
1
vote
0
replies
146k
views
Comment: C: Fastq Convert To Fasta
7.7 years ago by Prakki Rama ★ 2.7k
1
vote
0
replies
5.9k
views
Answer: A: how to find TMRCA, bayes factor using BEAST
7.7 years ago by Prakki Rama ★ 2.7k
1
vote
0
replies
7.8k
views
Answer: A: Split a concatenated alignment in multiple files
7.8 years ago by Prakki Rama ★ 2.7k
1
vote
2
replies
2.0k
views
Assembly and annotation statistics collection of various eukaryote genomes
n50 Assembly annotation assembly-size
updated 3.9 years ago by 45k • written 11.3 years ago by ★ 2.7k
0
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0
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2.0k
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Answer: A: Assembly and annotation statistics collection of various eukaryote genomes
8.0 years ago by Prakki Rama ★ 2.7k
0
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0
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4.8k
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Comment: C: Status of maker annotation
8.3 years ago by Prakki Rama ★ 2.7k
0
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0
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2.4k
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Comment: C: Two Bioinformaticians @ MPI-IE Freiburg, Germany
8.6 years ago by Prakki Rama ★ 2.7k
0
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1
reply
146k
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Comment: C: Fastq Convert To Fasta
8.9 years ago by Prakki Rama ★ 2.7k
0
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0
replies
5.3k
views
Comment: C: LoRDEC : Compilation error
8.9 years ago by Prakki Rama ★ 2.7k
0
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0
replies
2.5k
views
Comment: C: Looking for a bioinformatician to work on NGS analysis in epigenomics (New York
9.0 years ago by Prakki Rama ★ 2.7k
2
votes
0
replies
15k
views
Answer: A: Error In Bedtools Getfasta: Chromosome Not Found
9.0 years ago by Prakki Rama ★ 2.7k
0
votes
1
reply
98k
views
Comment: C: What Is The Best Method To Find Orthologous Genes Of A Species?
9.0 years ago by Prakki Rama ★ 2.7k
0
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0
replies
11k
views
Comment: C: Bioinformatics: Research In Academe Or Bioindustry?
9.1 years ago by Prakki Rama ★ 2.7k
0
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0
replies
6.5k
views
Comment: C: Inward oriented pairs and outward oriented pairs from a BAM file - Bamcheck vs S
9.1 years ago by Prakki Rama ★ 2.7k
436 results • Page 3 of 9
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