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Comment: C: blasting a nucleotide query file (about 2000 seq) over a group of transcriptomes
9.9 years ago by Prakki Rama ★ 2.7k
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Answer: Answer: Compare different RNASeq assemblers
updated 3.0 years ago by 45k • written 9.9 years ago by ★ 2.7k
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Answer: A: How to figure out coding sequence based on the results of blastx
9.9 years ago by Prakki Rama ★ 2.7k
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25k
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Answer: Answer: Assessing The Quality Of De Novo Assembled Data
updated 3.0 years ago by 45k • written 9.9 years ago by ★ 2.7k
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Comment: Comment: Local blastx against KEGG database
updated 3.0 years ago by 45k • written 9.9 years ago by ★ 2.7k
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Comment: C: Homolgous protein sequences from three proteomes
9.9 years ago by Prakki Rama ★ 2.7k
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25k
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Answer: Answer: Assessing The Quality Of De Novo Assembled Data
updated 3.0 years ago by 45k • written 10.1 years ago by ★ 2.7k
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Comment: Comment: Extract list of genes from a KEGG sub pathways
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
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Comment: C: explaining N50 to grand mother
10.0 years ago by Prakki Rama ★ 2.7k
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3.9k
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Comment: C: explaining N50 to grand mother
10.0 years ago by Prakki Rama ★ 2.7k
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3.9k
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Comment: Comment: explaining N50 to grand mother
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
6
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9
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3.9k
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explaining N50 to grand mother
Assembly genome
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
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2.2k
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Comment: C: The best tips for performing local blastx with XML format output
10.0 years ago by Prakki Rama ★ 2.7k
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5.4k
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Comment: C: Extract list of genes from a KEGG sub pathways
10.0 years ago by Prakki Rama ★ 2.7k
0
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1
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7.8k
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Answer: Answer: compare and search a list of ids in two text file
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
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Comment: C: Running MAKER2 pipeline with Augustus for the first time -- need some guidance
10.0 years ago by Prakki Rama ★ 2.7k
3
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1
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8.6k
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Comment: C: how to remove asterisk characters from a translated sequences (fasta format)?
10.0 years ago by Prakki Rama ★ 2.7k
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2.4k
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Comment: Comment: Re-naming some sequences header within the fasta file
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
1
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0
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2.3k
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Answer: A: comparing mapping results in two tools
10.0 years ago by Prakki Rama ★ 2.7k
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2.2k
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Comment: Comment: KEGG annotation results and transcriptome assembly quality
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
1
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0
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9.2k
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Answer: Answer: Large-scale open-source bioinformatics datasets
updated 3.0 years ago by 45k • written 10.0 years ago by ★ 2.7k
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4.1k
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Answer: Answer: Converting a list of different gene names to a common name in order to retrieve
updated 3.0 years ago by 45k • written 10.1 years ago by ★ 2.7k
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1
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25k
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Comment: C: Assessing The Quality Of De Novo Assembled Data
10.1 years ago by Prakki Rama ★ 2.7k
0
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1
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3.3k
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Comment: Comment: Filtering de novo transcriptomes - finding transcripts present in N samples
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.7k
1
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0
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2.2k
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Comment: C: calculating the coverage percentage from blast8
10.1 years ago by Prakki Rama ★ 2.7k
0
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0
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1.8k
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Comment: Comment: How Can I Count Dipeptide In Multiple Protein Sequences ?
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.7k
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0
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5.0k
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Comment: Comment: retrieving upstream and downstream region from a given sequence position
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.7k
2
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0
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11k
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Comment: Comment: Parsing a SAM file efficiently
updated 2.8 years ago by 45k • written 10.2 years ago by ★ 2.7k
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0
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2.7k
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Comment: Comment: how to group/cluster gene by pathways
updated 2.7 years ago by 45k • written 10.3 years ago by ★ 2.7k
0
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1
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3.0k
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Comment: Comment: Transcriptome reconstruction from both short reads and long sequences
updated 2.6 years ago by 45k • written 10.4 years ago by ★ 2.7k
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0
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3.0k
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Comment: C: Transcriptome reconstruction from both short reads and long sequences
10.4 years ago by Prakki Rama ★ 2.7k
0
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0
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3.0k
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Comment: Comment: Transcriptome reconstruction from both short reads and long sequences
updated 2.6 years ago by 45k • written 10.4 years ago by ★ 2.7k
5
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7
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3.0k
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Transcriptome reconstruction from both short reads and long sequences
Mapping BAM SAM
updated 2.6 years ago by 45k • written 10.4 years ago by ★ 2.7k
0
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0
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5.4k
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Answer: Answer: Make multi-fasta using perl
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 2.7k
0
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0
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2.2k
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Comment: C: Updated list of bioinformatics jobs sites
10.4 years ago by Prakki Rama ★ 2.7k
0
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0
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3.6k
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Comment: C: How to replace a set of sequence ID's with another set of sequence ID's ??
10.4 years ago by Prakki Rama ★ 2.7k
4
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2
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4.8k
views
Convert Abi-Solid Reads To Colored Space Fastq
solid fastq
updated 10.4 years ago by 20 • written 13.2 years ago by ★ 2.7k
0
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0
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28k
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Comment: C: searching reads with a certain sequence in fastq file
10.4 years ago by Prakki Rama ★ 2.7k
1
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2
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3.6k
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Answer: A: How to replace a set of sequence ID's with another set of sequence ID's ??
10.4 years ago by Prakki Rama ★ 2.7k
0
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0
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112k
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Comment: C: Number of mapped reads from BAM file
10.4 years ago by Prakki Rama ★ 2.7k
0
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1
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112k
views
Comment: Comment: Number of mapped reads from BAM file
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 2.7k
0
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0
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9.3k
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Comment: C: Simple Way To Graph A Gene Showing Putative Promotor Region, Utr, Introns And Ex
10.4 years ago by Prakki Rama ★ 2.7k
0
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1
reply
112k
views
Comment: Comment: Number of mapped reads from BAM file
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 2.7k
0
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0
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112k
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Comment: C: Number of mapped reads from BAM file
10.4 years ago by Prakki Rama ★ 2.7k
0
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1
reply
112k
views
Comment: Comment: Number of mapped reads from BAM file
updated 3.2 years ago by 45k • written 10.4 years ago by ★ 2.7k
1
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0
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6.0k
views
Answer: Answer: How to extract Gene symbol from protein fasta file header?
updated 3.8 years ago by 45k • written 10.5 years ago by ★ 2.7k
3
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0
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2.2k
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Answer: Answer: How to set K-mer length in velvet
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 2.7k
0
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1
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2.8k
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Comment: C: How to align long primary transcript sequences?
10.5 years ago by Prakki Rama ★ 2.7k
0
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1
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2.8k
views
Answer: Answer: How to align long primary transcript sequences?
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 2.7k
0
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0
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2.4k
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Comment: Comment: Counting number of TE in a file
updated 3.3 years ago by 45k • written 10.5 years ago by ★ 2.7k
436 results • Page 5 of 9
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