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Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
27 days ago by cfos4698 ▴ 770
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680
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Comment: Comment: Help with error in snpEff command
5 weeks ago by cfos4698 ▴ 770
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680
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Answer: Answer: Help with error in snpEff command
5 weeks ago by cfos4698 ▴ 770
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303
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
5 weeks ago by cfos4698 ▴ 770
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470
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Answer: Answer: Help with my fasta filter python scrips
6 weeks ago by cfos4698 ▴ 770
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0
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685
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Comment: Comment: bcftools isec output for multiple vcf files interpretations
6 weeks ago by cfos4698 ▴ 770
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389
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Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
9 weeks ago by cfos4698 ▴ 770
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0
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952
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Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
10 weeks ago by cfos4698 ▴ 770
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604
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Comment: Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
10 weeks ago by cfos4698 ▴ 770
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304
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Answer: Answer: Filtering VCF by specific tag in INFO field
12 weeks ago by cfos4698 ▴ 770
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423
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Comment: Comment: Can not get bcftools norm to join biallelics into a multiallelic.
12 weeks ago by cfos4698 ▴ 770
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3
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409
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Filtering of tricky overlapping sites in VCF
vcf bcftools
3 months ago by cfos4698 ▴ 770
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409
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Answer: Answer: Filtering of tricky overlapping sites in VCF
3 months ago by cfos4698 ▴ 770
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0
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409
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Comment: Comment: Filtering of tricky overlapping sites in VCF
3 months ago by cfos4698 ▴ 770
4
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429
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Answer: Answer: How to extract FASTA headers in R
3 months ago by cfos4698 ▴ 770
2
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1
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1.1k
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Comment: Comment: Conda is installing older version of Spades even though latest version is there
3 months ago by cfos4698 ▴ 770
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1.5k
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Comment: Comment: conda create env using .yml file leads to dependency conflicts
3 months ago by cfos4698 ▴ 770
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1.5k
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Comment: Comment: conda create env using .yml file leads to dependency conflicts
3 months ago by cfos4698 ▴ 770
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1
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1.5k
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Comment: Comment: conda create env using .yml file leads to dependency conflicts
3 months ago by cfos4698 ▴ 770
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2
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1.5k
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Answer: Answer: conda create env using .yml file leads to dependency conflicts
3 months ago by cfos4698 ▴ 770
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0
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754
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Comment: Comment: Split trio vcf file
3 months ago by cfos4698 ▴ 770
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1
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754
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Answer: Answer: Split trio vcf file
3 months ago by cfos4698 ▴ 770
3
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1
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685
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Answer: Answer: bcftools isec output for multiple vcf files interpretations
3 months ago by cfos4698 ▴ 770
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0
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311
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Answer: Answer: Issues with clusterProfiler and WikiPathways
3 months ago by cfos4698 ▴ 770
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1
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930
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Comment: Comment: PROKKA.gff file is not compatible with featureCounts
3 months ago by cfos4698 ▴ 770
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0
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685
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Answer: Answer: command line - how to change name of multiple files at the same time
4 months ago by cfos4698 ▴ 770
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0
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265
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Answer: Answer: Extract species-specific SNPs from VCF files
4 months ago by cfos4698 ▴ 770
1
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0
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613
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Comment: Comment: Issues With Using Singularity In Order To Run Software "quested access to the re
4 months ago by cfos4698 ▴ 770
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0
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843
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Comment: Comment: Error in reference fasta file when indexing with samtools
4 months ago by cfos4698 ▴ 770
2
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1
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843
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Comment: Comment: Error in reference fasta file when indexing with samtools
4 months ago by cfos4698 ▴ 770
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0
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580
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Comment: Comment: Not returning any alleles when using bcftools view -q
12 months ago by cfos4698 ▴ 770
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1
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580
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Answer: Answer: Not returning any alleles when using bcftools view -q
12 months ago by cfos4698 ▴ 770
2
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1
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795
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Answer: Answer: Errors loading in a treefile using ETE3
14 months ago by cfos4698 ▴ 770
0
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0
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928
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Answer: Answer: How can I trim the primer and mask it with the original primer sequences?
16 months ago by cfos4698 ▴ 770
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0
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590
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Comment: Comment: Sickle is giving empty trimmed file
16 months ago by cfos4698 ▴ 770
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0
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492
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Answer: Answer: subset vcf to keep only samples heterozygous or homozygous for the alternate all
16 months ago by cfos4698 ▴ 770
2
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0
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609
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Answer: Answer: Which is the file containing genome assembly?
16 months ago by cfos4698 ▴ 770
0
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1
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524
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Comment: Comment: Running bigWigToWig using Anaconda in a Linux System
16 months ago by cfos4698 ▴ 770
1
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1
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756
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Comment: Comment: Tools for pairwise sequence alignment
16 months ago by cfos4698 ▴ 770
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1.3k
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Answer: Answer: Command-line alternative to Geneious assemble for Sanger sequencing data
17 months ago by cfos4698 ▴ 770
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1
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577
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Answer: Answer: SnpEff does not create htmlStats
18 months ago by cfos4698 ▴ 770
1
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0
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1.1k
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Answer: Answer: a question about using Enrichr
18 months ago by cfos4698 ▴ 770
0
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0
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495
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Answer: Answer: help with filtering sequences to make a phylogenetic tree
18 months ago by cfos4698 ▴ 770
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0
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479
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Comment: Comment: Age nodes in R
18 months ago by cfos4698 ▴ 770
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1
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2.0k
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Comment: Comment: Snakemake Megahit error
19 months ago by cfos4698 ▴ 770
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0
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4.2k
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Comment: Comment: MinKNOW (guppy) not having the permission to basecall or demultiplex from a diff
19 months ago by cfos4698 ▴ 770
1
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1
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1.4k
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Comment: Comment: Functional profiling visualization enrichplot error: NAs introduced by coercion
19 months ago by cfos4698 ▴ 770
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1
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1.4k
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Comment: Comment: Functional profiling visualization enrichplot error: NAs introduced by coercion
19 months ago by cfos4698 ▴ 770
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0
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794
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Comment: Comment: Spike protein sequences for COVID-19 variants
19 months ago by cfos4698 ▴ 770
2
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1
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794
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Answer: Answer: Spike protein sequences for COVID-19 variants
19 months ago by cfos4698 ▴ 770
87 results • Page 1 of 2
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