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Answer: Answer: Problem with Newick format - ggtree in R
12 weeks ago by cfos4698 ★ 1.1k
1
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0
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579
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Answer: Answer: snippy error
3 months ago by cfos4698 ★ 1.1k
0
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0
replies
594
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Comment: Comment: RNA seq for non-model species
3 months ago by cfos4698 ★ 1.1k
2
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0
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641
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Comment: Comment: Why is local BLAST so slow? (yet another one of these questions)
3 months ago by cfos4698 ★ 1.1k
0
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1
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594
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Comment: Comment: RNA seq for non-model species
3 months ago by cfos4698 ★ 1.1k
2
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2
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594
views
Answer: Answer: RNA seq for non-model species
3 months ago by cfos4698 ★ 1.1k
1
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1
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758
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Answer: Answer: Trimming nanopore reads
3 months ago by cfos4698 ★ 1.1k
0
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0
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2.6k
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Comment: Comment: Should I use the basecaller Dorado to analyze my Nanopore Data?
4 months ago by cfos4698 ★ 1.1k
2
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0
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612
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Answer: Answer: Importing modules based on python in bash script wont work
5 months ago by cfos4698 ★ 1.1k
0
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0
replies
466
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Comment: Comment: Alternative to Gentrome?
5 months ago by cfos4698 ★ 1.1k
0
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1
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387
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Answer: Answer: What is the best way to identify which group of genes is more highly expressed?
5 months ago by cfos4698 ★ 1.1k
3
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1
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1.2k
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Comment: Comment: UMAP or TSNE for single cells?
6 months ago by cfos4698 ★ 1.1k
1
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0
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510
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Answer: Answer: Kaiju database download
6 months ago by cfos4698 ★ 1.1k
0
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0
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450
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Answer: Answer: Comparative transcriptomics between species
6 months ago by cfos4698 ★ 1.1k
2
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0
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6.1k
views
Answer: Answer: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
7 months ago by cfos4698 ★ 1.1k
1
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1
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1.5k
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Comment: Comment: Automate the Splitting of a VCF File by Sample (bcftools)
7 months ago by cfos4698 ★ 1.1k
1
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0
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983
views
Answer: Answer: What is the fastest nucleotide sequence alignment search tool for 100mer queries
8 months ago by cfos4698 ★ 1.1k
0
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0
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543
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Answer: Answer: Can vg stats -a be used on a bam file?
8 months ago by cfos4698 ★ 1.1k
1
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1
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965
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Answer: Answer: Found some plasmids in my sequence. IS there any tool or process by which i can
8 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
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Comment: Comment: Converting string to numerical in bcftools
8 months ago by cfos4698 ★ 1.1k
0
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0
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1.3k
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Comment: Comment: WGCNA Analysis - blockwiseModules data processing
8 months ago by cfos4698 ★ 1.1k
0
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1
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2.6k
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Comment: Comment: Cannot process all the reads in a fast5 file?
9 months ago by cfos4698 ★ 1.1k
0
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1
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969
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Answer: Answer: Align raw Nanopore reads (amplicon, long PCR)
9 months ago by cfos4698 ★ 1.1k
1
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0
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611
views
Answer: Answer: Can you convert ASCII text to fastq?
9 months ago by cfos4698 ★ 1.1k
0
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0
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399
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Answer: Answer: Measuring Evolutionary Distance Between Species from Chronogram
9 months ago by cfos4698 ★ 1.1k
0
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1
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850
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Answer: Answer: Extract Divergence Times and Corresponding Node Numbers from a Time Tree
9 months ago by cfos4698 ★ 1.1k
1
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1
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1.4k
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Clarification for bcftools consensus
bcftools vcf
9 months ago by cfos4698 ★ 1.1k
1
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0
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1.4k
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Answer: Answer: Clarification for bcftools consensus
9 months ago by cfos4698 ★ 1.1k
2
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1
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551
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Answer: Answer: Phylogenetic tree visualization
9 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
views
Comment: Comment: Converting string to numerical in bcftools
9 months ago by cfos4698 ★ 1.1k
0
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1
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1.5k
views
Answer: Answer: Converting string to numerical in bcftools
10 months ago by cfos4698 ★ 1.1k
0
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1
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34k
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Comment: Comment: Generating consensus sequence from bam file
10 months ago by cfos4698 ★ 1.1k
1
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1
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3.6k
views
Answer: Answer: Best tool for trimming and filtering nanopore direct RNA sequencing.
12 months ago by cfos4698 ★ 1.1k
1
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1
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1.6k
views
Comment: Comment: Help with error in snpEff command
12 months ago by cfos4698 ★ 1.1k
1
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1
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1.6k
views
Answer: Answer: Help with error in snpEff command
12 months ago by cfos4698 ★ 1.1k
0
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0
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2.3k
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Answer: Answer: Apple Silicon M1 for sequencing and base calling in MinION Mk1B Oxford Nanopore
12 months ago by cfos4698 ★ 1.1k
0
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1
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942
views
Answer: Answer: Help with my fasta filter python scrips
13 months ago by cfos4698 ★ 1.1k
1
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0
replies
2.6k
views
Comment: Comment: bcftools isec output for multiple vcf files interpretations
13 months ago by cfos4698 ★ 1.1k
1
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1
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1.1k
views
Answer: Answer: How can I use bcftools mpileup or an alternative to find ALL variants without an
13 months ago by cfos4698 ★ 1.1k
2
votes
0
replies
2.6k
views
Answer: Answer: Snakemake vs Nextflow Upcoming bioinformatics Project
13 months ago by cfos4698 ★ 1.1k
1
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0
replies
2.2k
views
Comment: Comment: Most efficient way to run Diamond against a very very large database (i.e., NCBI
13 months ago by cfos4698 ★ 1.1k
1
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0
replies
834
views
Answer: Answer: Filtering VCF by specific tag in INFO field
14 months ago by cfos4698 ★ 1.1k
0
votes
1
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1.2k
views
Comment: Comment: Can not get bcftools norm to join biallelics into a multiallelic.
14 months ago by cfos4698 ★ 1.1k
3
votes
3
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802
views
Filtering of tricky overlapping sites in VCF
vcf bcftools
14 months ago by cfos4698 ★ 1.1k
0
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0
replies
802
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Answer: Answer: Filtering of tricky overlapping sites in VCF
14 months ago by cfos4698 ★ 1.1k
0
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0
replies
802
views
Comment: Comment: Filtering of tricky overlapping sites in VCF
14 months ago by cfos4698 ★ 1.1k
6
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0
replies
918
views
Answer: Answer: How to extract FASTA headers in R
14 months ago by cfos4698 ★ 1.1k
2
votes
1
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3.8k
views
Comment: Comment: Conda is installing older version of Spades even though latest version is there
14 months ago by cfos4698 ★ 1.1k
0
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1
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5.1k
views
Comment: Comment: conda create env using .yml file leads to dependency conflicts
15 months ago by cfos4698 ★ 1.1k
0
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0
replies
5.1k
views
Comment: Comment: conda create env using .yml file leads to dependency conflicts
15 months ago by cfos4698 ★ 1.1k
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