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Comment: C: Should I replace heterozygous variants to make a consensus
7.1 years ago by deepti1rao ▴ 60
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Comment: C: Should I replace heterozygous variants to make a consensus
7.1 years ago by deepti1rao ▴ 60
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Comment: C: IUAPC codes in consensus sequence ? samtools mpileup / bcftools call / bcftools
7.1 years ago by deepti1rao ▴ 60
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Comment: C: Should I replace heterozygous variants to make a consensus
7.1 years ago by deepti1rao ▴ 60
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Comment: C: Need help with R script to edit x-axis of snp density plot
7.3 years ago by deepti1rao ▴ 60
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Comment: C: Known SNPs for rice for Base recalibration using GATK
7.3 years ago by deepti1rao ▴ 60
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Comment: C: What Are You Using For A Reference Assembler?
7.4 years ago by deepti1rao ▴ 60
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Comment: C: Is there a way to reformat vcf 4.2 down to 4.1?
7.4 years ago by deepti1rao ▴ 60
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Comment: C: SSPACE for scaffolding
7.5 years ago by deepti1rao ▴ 60
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Comment: A: SSPACE for scaffolding
7.5 years ago by deepti1rao ▴ 60
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Comment: C: Continuous alignment of contigs with reference using blast /blat
7.5 years ago by deepti1rao ▴ 60
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Comment: C: Continuous alignment of contigs with reference using blast /blat
7.5 years ago by deepti1rao ▴ 60
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3.1k
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Comment: C: How to show whole blast contig
7.5 years ago by deepti1rao ▴ 60
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Comment: C: Single Gene Orthologs
7.5 years ago by deepti1rao ▴ 60
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Comment: C: Is indel realigning necessary for INDEL discovery?
7.6 years ago by deepti1rao ▴ 60
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Comment: C: Judging best assembly
7.6 years ago by deepti1rao ▴ 60
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Comment: C: Judging best assembly
7.6 years ago by deepti1rao ▴ 60
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Comment: C: Total genome size Velvet
7.6 years ago by deepti1rao ▴ 60
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Comment: C: kmer distribution tiny peak at low coverage
7.6 years ago by deepti1rao ▴ 60
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4.0k
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Comment: C: kmer distribution tiny peak at low coverage
7.6 years ago by deepti1rao ▴ 60
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Comment: C: kmer distribution tiny peak at low coverage
7.6 years ago by deepti1rao ▴ 60
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Comment: C: How To Choose The K Value Of Kmer In Soapdenovo?
7.7 years ago by deepti1rao ▴ 60
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23k
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Comment: C: Trimming fastq with quality
7.9 years ago by deepti1rao ▴ 60
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Comment: C: bbduk for pre-processing
8.0 years ago by deepti1rao ▴ 60
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Comment: C: Insert size provided by bbmerge
8.0 years ago by deepti1rao ▴ 60
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3.0k
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Comment: C: Insert size provided by bbmerge
8.0 years ago by deepti1rao ▴ 60
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Comment: A: bbduk for pre-processing
8.0 years ago by deepti1rao ▴ 60
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Comment: A: Trimming reads with prinseq
8.0 years ago by deepti1rao ▴ 60
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4.0k
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Comment: A: Trimming reads with prinseq
updated 8.0 years ago by 154k • written 8.0 years ago by ▴ 60
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Comment: A: Trimming reads with prinseq
updated 8.0 years ago by 154k • written 8.0 years ago by ▴ 60
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Comment: A: Trimming reads with prinseq
8.0 years ago by deepti1rao ▴ 60
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3.4k
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Comment: C: Preprocessing the genomic data
8.2 years ago by deepti1rao ▴ 60
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
0
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1
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
0
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1
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5.0k
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Comment: C: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
0
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2
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5.0k
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Comment: A: Removal of PCR dupliactes from trimmed reads
8.2 years ago by deepti1rao ▴ 60
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4.8k
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Comment: C: Does Bowtie2 Map Multiple Reads To The Same Gene?
8.2 years ago by deepti1rao ▴ 60
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1.8k
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Comment: C: increase in SNP frequency towards the 3 end of reads
8.2 years ago by deepti1rao ▴ 60
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1
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2.7k
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Comment: C: Low quality of reads in reverse files toward the last bases
8.2 years ago by deepti1rao ▴ 60
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1
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7.6k
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Comment: C: Minimum length of reads
8.3 years ago by deepti1rao ▴ 60
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2.3k
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Comment: C: To screen for a good aligner
8.3 years ago by deepti1rao ▴ 60
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2.3k
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Comment: C: To screen for a good aligner
8.3 years ago by deepti1rao ▴ 60
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1
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7.6k
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Comment: C: Minimum length of reads
8.3 years ago by deepti1rao ▴ 60
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1
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7.6k
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Comment: C: Minimum length of reads
8.3 years ago by deepti1rao ▴ 60
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0
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7.6k
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Comment: C: Minimum length of reads
8.3 years ago by deepti1rao ▴ 60
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