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188
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Answer: Answer: Should I Use p-value or Adjusted p-value for Differential Methylation Analysis (
1 day ago by yura.grabovska ▴ 690
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1
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342
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Answer: Answer: Annotating Illumna epic probes
4 days ago by yura.grabovska ▴ 690
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227
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Answer: Answer: ScaleData not saving into SCE object
5 days ago by yura.grabovska ▴ 690
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311
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Answer: Answer: High adj. p-value/FDR despite large FC and high expression levels
10 days ago by yura.grabovska ▴ 690
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1
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365
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Comment: Comment: 'Model matrix not full rank'
12 days ago by yura.grabovska ▴ 690
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305
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Comment: Comment: File h5ad for SEVtras
15 days ago by yura.grabovska ▴ 690
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1
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305
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Comment: Comment: File h5ad for SEVtras
16 days ago by yura.grabovska ▴ 690
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586
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Answer: Answer: inserting Normalized count data
6 weeks ago by yura.grabovska ▴ 690
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0
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750
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Comment: Comment: Single-cell dimensionality reduction and clustering
8 weeks ago by yura.grabovska ▴ 690
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886
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Answer: Answer: Error in conversion of ensembl to gene names
8 weeks ago by yura.grabovska ▴ 690
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535
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Comment: Comment: Seurat Mito Prefix Removed from Features
8 weeks ago by yura.grabovska ▴ 690
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1
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535
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Answer: Answer: Seurat Mito Prefix Removed from Features
8 weeks ago by yura.grabovska ▴ 690
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301
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Answer: Answer: Is there a way to write a genbank file in R?
8 weeks ago by yura.grabovska ▴ 690
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0
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252
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Answer: Answer: Help using enricher function from clusterProfiler
8 weeks ago by yura.grabovska ▴ 690
1
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394
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Comment: Comment: How to retain interactive plots from Glimma in R Markdown HTML Document
9 weeks ago by yura.grabovska ▴ 690
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1
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394
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Comment: Comment: How to retain interactive plots from Glimma in R Markdown HTML Document
9 weeks ago by yura.grabovska ▴ 690
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1
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415
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Comment: Comment: New scRNA-seq analysis software - Web-base - No coding needed
9 weeks ago by yura.grabovska ▴ 690
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185
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Seurat/Signac multiome analysis filtering on nCounts instead of nFeatures
10x Signac Seurat multiome
9 weeks ago by yura.grabovska ▴ 690
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1
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396
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Answer: Answer: What is the difference between the SCT data stored in data and scale.data in Seu
9 weeks ago by yura.grabovska ▴ 690
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0
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826
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Comment: Comment: best practices for integrating
9 weeks ago by yura.grabovska ▴ 690
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1
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584
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Comment: Comment: Could Anyone Help Me with Seurat code
10 weeks ago by yura.grabovska ▴ 690
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1
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312
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Comment: Comment: Unable to link peaks to genes for multiomics data
10 weeks ago by yura.grabovska ▴ 690
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375
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Comment: Comment: Need help with fgsea
10 weeks ago by yura.grabovska ▴ 690
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2
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375
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Comment: Comment: Need help with fgsea
10 weeks ago by yura.grabovska ▴ 690
1
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1
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584
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Comment: Comment: Could Anyone Help Me with Seurat code
10 weeks ago by yura.grabovska ▴ 690
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0
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933
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
10 weeks ago by yura.grabovska ▴ 690
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0
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933
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
11 weeks ago by yura.grabovska ▴ 690
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1
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933
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
11 weeks ago by yura.grabovska ▴ 690
1
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1
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476
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Comment: Comment: I encountered some problem while using bitr() for gene ID transversion.
11 weeks ago by yura.grabovska ▴ 690
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0
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631
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Comment: Comment: Create Oncoprint with ggplot2
11 weeks ago by yura.grabovska ▴ 690
8
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3
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628
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What's going on with Ensembl?
biomaRt ensembl
updated 12 weeks ago by ▴ 170 • written 3 months ago by ▴ 690
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580
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Comment: Comment: How to install deconstructSigs in R
12 weeks ago by yura.grabovska ▴ 690
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1
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602
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Comment: Comment: Changing label geom_text in ggplot
12 weeks ago by yura.grabovska ▴ 690
2
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1
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602
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Answer: Answer: Changing label geom_text in ggplot
12 weeks ago by yura.grabovska ▴ 690
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0
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540
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Answer: Answer: TCGA Methylation Beta and Gene Expression Help
12 weeks ago by yura.grabovska ▴ 690
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0
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385
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Comment: Comment: cellranger error - insufficient disc space allocated to cellranger
12 weeks ago by yura.grabovska ▴ 690
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1
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340
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Comment: Comment: Pigeon make-seurat produces empty output
12 weeks ago by yura.grabovska ▴ 690
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0
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337
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Answer: Answer: fail to download data from seurat
3 months ago by yura.grabovska ▴ 690
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1
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312
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Comment: Comment: xCell output and immune cell ratio
3 months ago by yura.grabovska ▴ 690
1
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1
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473
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Answer: Answer: getMappedEntrezIDs from missmethyl package R
3 months ago by yura.grabovska ▴ 690
1
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1
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417
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Comment: Comment: Feature Selection for DNA methylation data
3 months ago by yura.grabovska ▴ 690
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0
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697
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Comment: Comment: Differential expression analysis between groups with varying cell proportions
3 months ago by yura.grabovska ▴ 690
1
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1
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697
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Comment: Comment: Differential expression analysis between groups with varying cell proportions
3 months ago by yura.grabovska ▴ 690
1
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1
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697
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
3 months ago by yura.grabovska ▴ 690
1
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0
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261
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Comment: Comment: Good Dotplots for homogenous data (Seurat)
3 months ago by yura.grabovska ▴ 690
1
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1
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697
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
3 months ago by yura.grabovska ▴ 690
1
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1
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372
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Comment: Comment: Cell cluster that mainly consists of doublet.
3 months ago by yura.grabovska ▴ 690
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303
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Comment: Comment: CCLE Cell lines annotations
3 months ago by yura.grabovska ▴ 690
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1
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530
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Comment: Comment: 0-based or 1-based file format using R pipeline?
3 months ago by yura.grabovska ▴ 690
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1
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530
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Comment: Comment: 0-based or 1-based file format using R pipeline?
3 months ago by yura.grabovska ▴ 690
150 results • Page 1 of 3
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