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Comment: Comment: GUI commercial software for 10x single cell gene expression analysis
22 days ago by yura.grabovska ▴ 870
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2
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1.6k
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Comment: Comment: GUI commercial software for 10x single cell gene expression analysis
23 days ago by yura.grabovska ▴ 870
1
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1
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457
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infercnv error at STEP 18 - file descriptor is too large for select()
R 10x singlecell infercnv
24 days ago by yura.grabovska ▴ 870
1
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0
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457
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Answer: Answer: infercnv error at STEP 18 - file descriptor is too large for select()
24 days ago by yura.grabovska ▴ 870
1
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1
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1.5k
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Answer: Answer: Differences between published differential gene expression results and own analy
28 days ago by yura.grabovska ▴ 870
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0
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1.3k
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Comment: Comment: After doublet detection in 10x scRNA-Seq data, there is still evidence of double
28 days ago by yura.grabovska ▴ 870
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0
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2.2k
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Comment: Comment: DNA copy number blacklist for excluding common unreliable regions
28 days ago by yura.grabovska ▴ 870
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2
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2.2k
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DNA copy number blacklist for excluding common unreliable regions
blacklist copy number
28 days ago by yura.grabovska ▴ 870
1
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0
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10k
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Answer: Answer: how to start
7 weeks ago by yura.grabovska ▴ 870
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0
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9.1k
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Comment: Comment: UMAP QC
9 weeks ago by yura.grabovska ▴ 870
1
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0
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630
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Comment: Comment: Help regarding quality control of 10X run?
12 weeks ago by yura.grabovska ▴ 870
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0
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2.0k
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Comment: Comment: How do you clean GEO metadata before downstream analysis?
3 months ago by yura.grabovska ▴ 870
1
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1
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2.0k
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Comment: Comment: How do you clean GEO metadata before downstream analysis?
3 months ago by yura.grabovska ▴ 870
1
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0
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1.9k
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Comment: Comment: Tool to clean GEO metadata
3 months ago by yura.grabovska ▴ 870
0
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1
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2.1k
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Comment: Comment: DGE analysis in Seurat using paired samples per donor ?
3 months ago by yura.grabovska ▴ 870
0
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0
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718
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Comment: Comment: How to add gene lable on GSEA plot
4 months ago by yura.grabovska ▴ 870
0
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1
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718
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Comment: Comment: How to add gene lable on GSEA plot
4 months ago by yura.grabovska ▴ 870
0
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1
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2.1k
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Answer: Answer: DGE analysis in Seurat using paired samples per donor ?
4 months ago by yura.grabovska ▴ 870
0
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0
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730
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Comment: Comment: Comparing sets of genes for similarity
5 months ago by yura.grabovska ▴ 870
1
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2
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730
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Comparing sets of genes for similarity
R jaccard genes marker clustering
5 months ago by yura.grabovska ▴ 870
1
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0
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785
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Answer: Answer: Why is this interaction result not significant in DESeq2
6 months ago by yura.grabovska ▴ 870
1
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0
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809
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Answer: Answer: Choosing the best clustering method for a certain methylation data
6 months ago by yura.grabovska ▴ 870
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0
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1.1k
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Comment: Comment: How to Make Cell Order identical Between Two Seurat Objects in R?
7 months ago by yura.grabovska ▴ 870
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1
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1.1k
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Comment: Comment: How to Make Cell Order identical Between Two Seurat Objects in R?
7 months ago by yura.grabovska ▴ 870
1
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1
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1.1k
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Answer: Answer: How to Make Cell Order identical Between Two Seurat Objects in R?
7 months ago by yura.grabovska ▴ 870
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0
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940
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Comment: Comment: Methylation cpg probes annotation
7 months ago by yura.grabovska ▴ 870
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0
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551
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cNMF missing spectra iterations - what am I doing wrong?
cNMF python single-cell
7 months ago by yura.grabovska ▴ 870
1
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0
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764
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Answer: Answer: Impact of the number of PCs on the clustering in scRNA seq
7 months ago by yura.grabovska ▴ 870
0
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0
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639
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Answer: Answer: Installing vg on Mac failed due to "Could not find libomp"
7 months ago by yura.grabovska ▴ 870
3
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1
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662
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Current best practice for alignment and quantification for downstream analysis in DESeq2
R DESeq2 alignment
updated 8 months ago by 105k • written 8 months ago by ▴ 870
0
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0
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1.3k
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Comment: Comment: What is best way to do CNV Analysis on Xenium data (Spatial transcriptomics)?
8 months ago by yura.grabovska ▴ 870
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0
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1.3k
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Answer: Answer: What is best way to do CNV Analysis on Xenium data (Spatial transcriptomics)?
8 months ago by yura.grabovska ▴ 870
0
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1
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1.0k
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Answer: Answer: P-value calculation between groups in split violin plot
8 months ago by yura.grabovska ▴ 870
0
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3
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1.3k
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After doublet detection in 10x scRNA-Seq data, there is still evidence of doublets
R DoubletFinder Seurat scRNA
28 days ago by yura.grabovska ▴ 870
3
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1
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2.8k
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Comment: Comment: R CytoTRACE2 Results: Potency Score of Naive B Cells Lower Than Memory B and Pla
8 months ago by yura.grabovska ▴ 870
0
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0
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905
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Answer: Answer: Should I Use p-value or Adjusted p-value for Differential Methylation Analysis (
8 months ago by yura.grabovska ▴ 870
0
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1
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1.3k
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Answer: Answer: Annotating Illumna epic probes
8 months ago by yura.grabovska ▴ 870
0
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0
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554
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Answer: Answer: ScaleData not saving into SCE object
8 months ago by yura.grabovska ▴ 870
0
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0
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806
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Answer: Answer: High adj. p-value/FDR despite large FC and high expression levels
9 months ago by yura.grabovska ▴ 870
0
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1
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1.4k
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Comment: Comment: 'Model matrix not full rank'
9 months ago by yura.grabovska ▴ 870
0
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0
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829
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Comment: Comment: File h5ad for SEVtras
9 months ago by yura.grabovska ▴ 870
0
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1
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829
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Comment: Comment: File h5ad for SEVtras
9 months ago by yura.grabovska ▴ 870
0
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0
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945
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Answer: Answer: inserting Normalized count data
10 months ago by yura.grabovska ▴ 870
0
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0
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1.8k
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Comment: Comment: Single-cell dimensionality reduction and clustering
10 months ago by yura.grabovska ▴ 870
0
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0
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2.0k
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Answer: Answer: Error in conversion of ensembl to gene names
10 months ago by yura.grabovska ▴ 870
0
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0
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1.8k
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Comment: Comment: Seurat Mito Prefix Removed from Features
10 months ago by yura.grabovska ▴ 870
0
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1
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1.8k
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Answer: Answer: Seurat Mito Prefix Removed from Features
10 months ago by yura.grabovska ▴ 870
0
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0
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757
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Answer: Answer: Is there a way to write a genbank file in R?
10 months ago by yura.grabovska ▴ 870
0
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0
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621
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Answer: Answer: Help using enricher function from clusterProfiler
10 months ago by yura.grabovska ▴ 870
1
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0
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775
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Comment: Comment: How to retain interactive plots from Glimma in R Markdown HTML Document
10 months ago by yura.grabovska ▴ 870
185 results • Page 1 of 4
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