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Comment: Comment: How to retain interactive plots from Glimma in R Markdown HTML Document
10 months ago by yura.grabovska ▴ 870
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913
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Comment: Comment: New scRNA-seq analysis software - Web-base - No coding needed
11 months ago by yura.grabovska ▴ 870
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537
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Seurat/Signac multiome analysis filtering on nCounts instead of nFeatures
10x Signac Seurat multiome
11 months ago by yura.grabovska ▴ 870
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2.6k
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Answer: Answer: What is the difference between the SCT data stored in data and scale.data in Seu
11 months ago by yura.grabovska ▴ 870
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1.2k
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Comment: Comment: best practices for integrating
11 months ago by yura.grabovska ▴ 870
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1.8k
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Comment: Comment: Could Anyone Help Me with Seurat code
11 months ago by yura.grabovska ▴ 870
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1
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869
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Comment: Comment: Unable to link peaks to genes for multiomics data
11 months ago by yura.grabovska ▴ 870
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1.2k
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Comment: Comment: Need help with fgsea
11 months ago by yura.grabovska ▴ 870
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2
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1.2k
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Comment: Comment: Need help with fgsea
11 months ago by yura.grabovska ▴ 870
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1.8k
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Comment: Comment: Could Anyone Help Me with Seurat code
11 months ago by yura.grabovska ▴ 870
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2.0k
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
11 months ago by yura.grabovska ▴ 870
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0
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2.0k
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
11 months ago by yura.grabovska ▴ 870
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1
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2.0k
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Comment: Comment: Seeking a tool for enrichment of a small list of ranked genes
11 months ago by yura.grabovska ▴ 870
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1
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1.1k
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Comment: Comment: I encountered some problem while using bitr() for gene ID transversion.
11 months ago by yura.grabovska ▴ 870
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0
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2.1k
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Comment: Comment: Create Oncoprint with ggplot2
11 months ago by yura.grabovska ▴ 870
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3
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1.3k
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What's going on with Ensembl?
biomaRt ensembl
updated 11 months ago by ▴ 170 • written 12 months ago by ▴ 870
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1.4k
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Comment: Comment: How to install deconstructSigs in R
11 months ago by yura.grabovska ▴ 870
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1
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1.1k
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Comment: Comment: Changing label geom_text in ggplot
11 months ago by yura.grabovska ▴ 870
2
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1
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1.1k
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Answer: Answer: Changing label geom_text in ggplot
11 months ago by yura.grabovska ▴ 870
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0
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1.3k
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Answer: Answer: TCGA Methylation Beta and Gene Expression Help
11 months ago by yura.grabovska ▴ 870
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0
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756
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Comment: Comment: cellranger error - insufficient disc space allocated to cellranger
11 months ago by yura.grabovska ▴ 870
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1
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720
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Comment: Comment: Pigeon make-seurat produces empty output
11 months ago by yura.grabovska ▴ 870
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565
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Answer: Answer: fail to download data from seurat
12 months ago by yura.grabovska ▴ 870
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1
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642
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Comment: Comment: xCell output and immune cell ratio
12 months ago by yura.grabovska ▴ 870
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923
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Answer: Answer: getMappedEntrezIDs from missmethyl package R
12 months ago by yura.grabovska ▴ 870
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1
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711
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Comment: Comment: Feature Selection for DNA methylation data
12 months ago by yura.grabovska ▴ 870
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0
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1.4k
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Comment: Comment: Differential expression analysis between groups with varying cell proportions
12 months ago by yura.grabovska ▴ 870
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1
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1.4k
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Comment: Comment: Differential expression analysis between groups with varying cell proportions
12 months ago by yura.grabovska ▴ 870
1
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1
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1.3k
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
12 months ago by yura.grabovska ▴ 870
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0
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493
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Comment: Comment: Good Dotplots for homogenous data (Seurat)
12 months ago by yura.grabovska ▴ 870
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1
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1.3k
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Comment: Comment: Gene set enrichment analysis gives a lot of "significant pathways"
12 months ago by yura.grabovska ▴ 870
1
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1
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790
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Comment: Comment: Cell cluster that mainly consists of doublet.
12 months ago by yura.grabovska ▴ 870
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0
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627
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Comment: Comment: CCLE Cell lines annotations
12 months ago by yura.grabovska ▴ 870
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1
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987
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Comment: Comment: 0-based or 1-based file format using R pipeline?
12 months ago by yura.grabovska ▴ 870
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1
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987
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Comment: Comment: 0-based or 1-based file format using R pipeline?
12 months ago by yura.grabovska ▴ 870
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1
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1.0k
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Answer: Answer: Appropriate minimum gene set size for gene set enrichment analysis
12 months ago by yura.grabovska ▴ 870
2
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1
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1.2k
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Seurat Xenium QC
R Xenium spatial Seurat
updated 12 months ago by 6.5k • written 12 months ago by ▴ 870
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0
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916
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Comment: Comment: cnvpytor run problem
12 months ago by yura.grabovska ▴ 870
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1
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916
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Answer: Answer: cnvpytor run problem
12 months ago by yura.grabovska ▴ 870
1
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1
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1.7k
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Answer: Answer: PCA for count data
12 months ago by yura.grabovska ▴ 870
1
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0
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1.2k
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Comment: Comment: Removing features from RNA assay in seurat
12 months ago by yura.grabovska ▴ 870
1
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1
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1.2k
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Comment: Comment: Removing features from RNA assay in seurat
12 months ago by yura.grabovska ▴ 870
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0
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2.9k
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Comment: Comment: Center multiple pheatmap
12 months ago by yura.grabovska ▴ 870
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1
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2.9k
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Comment: Comment: Center multiple pheatmap
12 months ago by yura.grabovska ▴ 870
2
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0
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962
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Comment: Comment: creat histogram in R
12 months ago by yura.grabovska ▴ 870
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0
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627
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Comment: Comment: Course: Single-cell RNA-seq analysis with R/Bioconductor
12 months ago by yura.grabovska ▴ 870
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1
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1.4k
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Comment: Comment: GSVA with a genelist on a "per-cluster" basis
12 months ago by yura.grabovska ▴ 870
1
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1
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1.4k
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Answer: Answer: GSVA with a genelist on a "per-cluster" basis
12 months ago by yura.grabovska ▴ 870
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0
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1.2k
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Comment: Comment: Error function vst in DESeq2
12 months ago by yura.grabovska ▴ 870
1
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1
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922
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Answer: Answer: Using scRNA-seq to draw concrete evidence about transitional cluster
13 months ago by yura.grabovska ▴ 870
185 results • Page 2 of 4
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