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Answer: Answer: DGE analysis in Seurat using paired samples per donor ?
10 days ago by yura.grabovska ▴ 780
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600
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Answer: Answer: Why is this interaction result not significant in DESeq2
10 weeks ago by yura.grabovska ▴ 780
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588
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Answer: Answer: Choosing the best clustering method for a certain methylation data
3 months ago by yura.grabovska ▴ 780
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820
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Answer: Answer: How to Make Cell Order identical Between Two Seurat Objects in R?
3 months ago by yura.grabovska ▴ 780
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577
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Answer: Answer: Impact of the number of PCs on the clustering in scRNA seq
4 months ago by yura.grabovska ▴ 780
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453
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Answer: Answer: Installing vg on Mac failed due to "Could not find libomp"
4 months ago by yura.grabovska ▴ 780
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759
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Answer: Answer: What is best way to do CNV Analysis on Xenium data (Spatial transcriptomics)?
4 months ago by yura.grabovska ▴ 780
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700
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Answer: Answer: P-value calculation between groups in split violin plot
4 months ago by yura.grabovska ▴ 780
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654
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Answer: Answer: Should I Use p-value or Adjusted p-value for Differential Methylation Analysis (
5 months ago by yura.grabovska ▴ 780
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889
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Answer: Answer: Annotating Illumna epic probes
5 months ago by yura.grabovska ▴ 780
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450
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Answer: Answer: ScaleData not saving into SCE object
5 months ago by yura.grabovska ▴ 780
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636
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Answer: Answer: High adj. p-value/FDR despite large FC and high expression levels
5 months ago by yura.grabovska ▴ 780
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791
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Answer: Answer: inserting Normalized count data
6 months ago by yura.grabovska ▴ 780
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1.5k
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Answer: Answer: Error in conversion of ensembl to gene names
7 months ago by yura.grabovska ▴ 780
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1.2k
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Answer: Answer: Seurat Mito Prefix Removed from Features
7 months ago by yura.grabovska ▴ 780
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592
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Answer: Answer: Is there a way to write a genbank file in R?
7 months ago by yura.grabovska ▴ 780
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467
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Answer: Answer: Help using enricher function from clusterProfiler
7 months ago by yura.grabovska ▴ 780
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1.5k
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Answer: Answer: What is the difference between the SCT data stored in data and scale.data in Seu
7 months ago by yura.grabovska ▴ 780
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936
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Answer: Answer: Changing label geom_text in ggplot
7 months ago by yura.grabovska ▴ 780
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919
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Answer: Answer: TCGA Methylation Beta and Gene Expression Help
7 months ago by yura.grabovska ▴ 780
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475
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Answer: Answer: fail to download data from seurat
8 months ago by yura.grabovska ▴ 780
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704
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Answer: Answer: getMappedEntrezIDs from missmethyl package R
8 months ago by yura.grabovska ▴ 780
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773
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Answer: Answer: Appropriate minimum gene set size for gene set enrichment analysis
8 months ago by yura.grabovska ▴ 780
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721
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Answer: Answer: cnvpytor run problem
8 months ago by yura.grabovska ▴ 780
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1.3k
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Answer: Answer: PCA for count data
8 months ago by yura.grabovska ▴ 780
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1.1k
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Answer: Answer: GSVA with a genelist on a "per-cluster" basis
9 months ago by yura.grabovska ▴ 780
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647
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Answer: Answer: Using scRNA-seq to draw concrete evidence about transitional cluster
9 months ago by yura.grabovska ▴ 780
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1.4k
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Answer: Answer: Error in pheatmap 'Error in hclust(d, method = method) : must have n >= 2 object
9 months ago by yura.grabovska ▴ 780
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412
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Answer: Answer: filter genes for differential gene expression
9 months ago by yura.grabovska ▴ 780
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1.6k
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Answer: Answer: Help Analysing Perturb-Seq Data - How do I extract 10X cell barcodes and relevan
10 months ago by yura.grabovska ▴ 780
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3.0k
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Answer: Answer: Can't reproduce harmony results in Seurat
10 months ago by yura.grabovska ▴ 780
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2
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898
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Answer: Answer: Weird outcomes from employing NMF on scRNA-seq data
10 months ago by yura.grabovska ▴ 780
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967
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Answer: Answer: Statistics of methylation experiments
10 months ago by yura.grabovska ▴ 780
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770
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Answer: Answer: Using findmarker of seurat with different test.use but getting the same resulat.
10 months ago by yura.grabovska ▴ 780
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944
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Answer: Answer: Integration of scRNA-seq datasets from different tissues
11 months ago by yura.grabovska ▴ 780
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2.3k
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Answer: Answer: How to Read .CEL files in R-studio?
11 months ago by yura.grabovska ▴ 780
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883
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Answer: Answer: Help with heatmaps
12 months ago by yura.grabovska ▴ 780
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1.3k
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Answer: Answer: scRNA-seq: Do people eliminate housekeeping genes for the sake of increasing alg
12 months ago by yura.grabovska ▴ 780
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1.3k
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Answer: Answer: Issue with converting Affy IDs to gene IDs/symbols
12 months ago by yura.grabovska ▴ 780
2
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2
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1.0k
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Answer: Answer: adjusting pheatmap based on common genes
12 months ago by yura.grabovska ▴ 780
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1
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1.5k
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Answer: Answer: Differential analysis of enrichment results
12 months ago by yura.grabovska ▴ 780
2
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0
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2.1k
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Answer: Answer: Change the layout of the Venn diagram
12 months ago by yura.grabovska ▴ 780
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1
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760
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Answer: Answer: Help with complex Volcano Plot
12 months ago by yura.grabovska ▴ 780
2
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1
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1.1k
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Answer: Answer: Findind the annotation file of the Illumina Infinium HumanMethylation450k array
12 months ago by yura.grabovska ▴ 780
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1.6k
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Answer: Answer: Before doing pseudobulk, should we get rid of genes that are only expressed in a
12 months ago by yura.grabovska ▴ 780
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680
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Answer: Answer: Statistical test or method to test relationship between nearby genes and CpG sit
12 months ago by yura.grabovska ▴ 780
5
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805
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Answer: Answer: Merged analysis of microarray datasets using R
12 months ago by yura.grabovska ▴ 780
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3.8k
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Answer: Answer: Filtering seurat object
12 months ago by yura.grabovska ▴ 780
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1
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1.7k
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Answer: Answer: Calling variants/SNP for single-cell RNA-seq data
12 months ago by yura.grabovska ▴ 780
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1
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3.7k
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Answer: Answer: Errors with GSEA using clusterProfiler
12 months ago by yura.grabovska ▴ 780
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