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Comment: Comment: DEseq2 on expected counts
13 months ago by jared.andrews07 ★ 19k
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2.7k
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Comment: Comment: How get density plot TSS region for genes of interest
13 months ago by jared.andrews07 ★ 19k
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Comment: Comment: DEseq2 on expected counts
13 months ago by jared.andrews07 ★ 19k
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Comment: Comment: Pcoa plot
13 months ago by jared.andrews07 ★ 19k
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1.1k
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Comment: Comment: Pcoa plot
13 months ago by jared.andrews07 ★ 19k
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Answer: Answer: Creating a signature matrix using CibersortX
13 months ago by jared.andrews07 ★ 19k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
13 months ago by jared.andrews07 ★ 19k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
13 months ago by jared.andrews07 ★ 19k
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2.4k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
13 months ago by jared.andrews07 ★ 19k
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834
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Comment: Comment: Approaches to validate hits from CRISPR-screen in mice
13 months ago by jared.andrews07 ★ 19k
1
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2
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2.4k
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Answer: Answer: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
13 months ago by jared.andrews07 ★ 19k
0
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0
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2.4k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
13 months ago by jared.andrews07 ★ 19k
0
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1
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834
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Answer: Answer: Approaches to validate hits from CRISPR-screen in mice
13 months ago by jared.andrews07 ★ 19k
1
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0
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20k
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Comment: Comment: Combining GSEA (Gene Set Enrichment analysis) and DEG (Differentially Expressed
13 months ago by jared.andrews07 ★ 19k
2
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902
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Answer: Answer: Is ComBat not able to to handle only two batches? What are good alternatives?
13 months ago by jared.andrews07 ★ 19k
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1.7k
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Comment: Comment: DESeq2 results vs. shrinkage results
13 months ago by jared.andrews07 ★ 19k
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1
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1.7k
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Comment: Comment: Grammar of Graphics for Heatmap
14 months ago by jared.andrews07 ★ 19k
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1.0k
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Comment: Comment: Percentage Problem
14 months ago by jared.andrews07 ★ 19k
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1.0k
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Answer: Answer: Percentage Problem
14 months ago by jared.andrews07 ★ 19k
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0
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985
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Answer: Answer: Suggestions for resource for running R training
14 months ago by jared.andrews07 ★ 19k
2
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1
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1.0k
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Answer: Answer: Why Are There Differences in RNA-seq Results?
14 months ago by jared.andrews07 ★ 19k
1
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2.0k
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Comment: Comment: Mageck RRA is listing negative controls as high fold change in the gene summary
14 months ago by jared.andrews07 ★ 19k
1
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1
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2.0k
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Answer: Answer: Mageck RRA is listing negative controls as high fold change in the gene summary
14 months ago by jared.andrews07 ★ 19k
2
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2
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2.0k
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Comment: Comment: How to account for total number of cells when aggregating for pseudobulk?
14 months ago by jared.andrews07 ★ 19k
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1.2k
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Comment: Comment: error in CIBERSORTx
14 months ago by jared.andrews07 ★ 19k
1
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609
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Answer: Answer: Differential expression bias in Seurat
14 months ago by jared.andrews07 ★ 19k
1
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956
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Comment: Comment: single cell RNA sequencing and mitochondrial percent
14 months ago by jared.andrews07 ★ 19k
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1.4k
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Comment: Comment: How to identify cell identities in mixed scRNA-seq using mutational signatures f
14 months ago by jared.andrews07 ★ 19k
2
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1
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1.4k
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Answer: Answer: How to identify cell identities in mixed scRNA-seq using mutational signatures f
14 months ago by jared.andrews07 ★ 19k
2
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1
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893
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Answer: Answer: Understanding dimred in scater for scRNASeq
14 months ago by jared.andrews07 ★ 19k
2
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1
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1.5k
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Answer: Answer: Why does DESeq2 give negative log2 fold change in treatment vs control for some
14 months ago by jared.andrews07 ★ 19k
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0
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1.1k
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Comment: Comment: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
14 months ago by jared.andrews07 ★ 19k
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0
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1.1k
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Comment: Comment: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
14 months ago by jared.andrews07 ★ 19k
2
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1
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1.1k
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Answer: Answer: DESeq2_ How to Account for the Expression Levels of a Specific Gene?
14 months ago by jared.andrews07 ★ 19k
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0
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1.8k
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Answer: Answer: How to find transcription factors list?
15 months ago by jared.andrews07 ★ 19k
1
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0
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2.0k
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Answer: Answer: Seurat object with multiple PCAs/UMAPs from different assays
15 months ago by jared.andrews07 ★ 19k
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0
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1.0k
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Comment: Comment: Is there a common acceptance criteria for sample contamination?
15 months ago by jared.andrews07 ★ 19k
1
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0
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1.9k
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Comment: Comment: Pseudobulking per patient
15 months ago by jared.andrews07 ★ 19k
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0
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911
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Answer: Answer: gProfiler vs Panther_go in overrepresentation pathways R analysis
15 months ago by jared.andrews07 ★ 19k
1
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1
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1.9k
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Answer: Answer: Pseudobulking per patient
15 months ago by jared.andrews07 ★ 19k
0
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1
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1.0k
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Comment: Comment: Is there a common acceptance criteria for sample contamination?
15 months ago by jared.andrews07 ★ 19k
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0
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1.6k
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Answer: Answer: InferCNV results interpretation
15 months ago by jared.andrews07 ★ 19k
0
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1
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1.4k
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Comment: Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
15 months ago by jared.andrews07 ★ 19k
0
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1
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1.4k
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Answer: Answer: How to add Ensembl ids after Pseudobulk analysis by DESeq2
15 months ago by jared.andrews07 ★ 19k
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0
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1.3k
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Answer: Answer: Facing problem with single cell rna seq annotation using singleR
updated 15 months ago by 45k • written 15 months ago by ★ 19k
0
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0
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3.4k
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Comment: Comment: Harmony integration group.by.var parameter
15 months ago by jared.andrews07 ★ 19k
1
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1
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3.4k
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Comment: Comment: Harmony integration group.by.var parameter
15 months ago by jared.andrews07 ★ 19k
1
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2
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3.4k
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Answer: Answer: Harmony integration group.by.var parameter
15 months ago by jared.andrews07 ★ 19k
0
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1
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794
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Answer: Answer: Trying to understand warning from MACS2 about too few paired peaks and differing
15 months ago by jared.andrews07 ★ 19k
1
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0
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2.4k
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Answer: Answer: Mouse or Rat Gene Expression Data Similar to GTEx
15 months ago by jared.andrews07 ★ 19k
1,663 results • Page 4 of 34
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