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Answer: Answer: Discussions about QC of sc-multiomic-ATAC_RNA-seq from 10xgenomics platform in t
7 days ago by jared.andrews07 ★ 19k
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Answer: Answer: Is this Rosalind inspired project actually useful?
9 days ago by jared.andrews07 ★ 19k
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554
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Answer: Answer: Biological meaning of metrics commonly used for QC in scRNA-seq?
16 days ago by jared.andrews07 ★ 19k
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589
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Answer: Answer: Best way to combine biological replicate peaks?
6 weeks ago by jared.andrews07 ★ 19k
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Answer: Answer: Introducing Grantease: Go From RFA to First Draft Grant Proposal in 15 Minutes
10 weeks ago by jared.andrews07 ★ 19k
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1.1k
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Answer: Answer: Batch correction RNA-seq analysis
10 weeks ago by jared.andrews07 ★ 19k
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741
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Answer: Answer: Using bulk RNA-seq DE results to perform PCA in single cell RNA-seq
11 weeks ago by jared.andrews07 ★ 19k
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525
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Answer: Answer: Seeking Advice on Handling Multiple Datasets for Differential Analysis in Transc
12 weeks ago by jared.andrews07 ★ 19k
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769
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Answer: Answer: Question: Making primers for cloning and transfection
3 months ago by jared.andrews07 ★ 19k
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907
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Answer: Answer: Help with CIBERSORTx Error in Single-Cell RNA-seq Analysis: Invalid 'times' Argu
3 months ago by jared.andrews07 ★ 19k
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625
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Answer: Answer: dentifying tumor vs normal cells in spatial transcriptomics
4 months ago by jared.andrews07 ★ 19k
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595
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Answer: Answer: Scdblfinder issue
4 months ago by jared.andrews07 ★ 19k
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453
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Answer: Answer: Figures and plots for integration of ATAC and RNA seq data
4 months ago by jared.andrews07 ★ 19k
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Answer: Answer: High Variability when Peak Calling with SEACR
4 months ago by jared.andrews07 ★ 19k
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1.1k
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Answer: Answer: Speed up umap parameter optimisation?
4 months ago by jared.andrews07 ★ 19k
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451
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Answer: Answer: Eigencor plot after limma::removeBatchEffect
4 months ago by jared.andrews07 ★ 19k
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785
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Answer: Answer: How do I annotate cell types in CIBERSORTx when using the scRNA-seq option?
4 months ago by jared.andrews07 ★ 19k
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Answer: Answer: "precedence" in genomation R package
4 months ago by jared.andrews07 ★ 19k
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1.3k
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Answer: Answer: Preparation needed to get into Bioinformatic field
4 months ago by jared.andrews07 ★ 19k
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757
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Answer: Answer: Finding high number of significant genes by FindMarkers by Seurat
4 months ago by jared.andrews07 ★ 19k
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Answer: Answer: How do you estimate time to complete a project or task?
4 months ago by jared.andrews07 ★ 19k
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685
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Answer: Answer: submitting to SRA database
4 months ago by jared.andrews07 ★ 19k
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1.1k
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Answer: Answer: single-cell zeros handling, inputation and filtration
4 months ago by jared.andrews07 ★ 19k
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932
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Answer: Answer: Why only C > A,T,G and T > A,G,C mutations typically considered in 96 SBS contex
5 months ago by jared.andrews07 ★ 19k
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492
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Answer: Answer: What's the point of integrating single cell data of different conditions?
4 months ago by jared.andrews07 ★ 19k
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577
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Answer: Answer: MT and rRNA gene expression in bulk RNA-seq sample QC filtering
5 months ago by jared.andrews07 ★ 19k
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623
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Answer: Answer: How to Test Statistical Association Between Clusters and Conditions in scRNA-seq
5 months ago by jared.andrews07 ★ 19k
2
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922
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Answer: Answer: Computational way to distinguish between polyA and total RNA bulk RNA-seq
5 months ago by jared.andrews07 ★ 19k
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2
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1.0k
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Answer: Answer: Database like Cellxgene for well-annotated atlas
6 months ago by jared.andrews07 ★ 19k
3
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884
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Answer: Answer: How do I start my journey as bioinformatics?
6 months ago by jared.andrews07 ★ 19k
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1.0k
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Answer: Answer: How to include the lane index in STARsolo count matrix barcodes.tsv?
6 months ago by jared.andrews07 ★ 19k
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0
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924
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Answer: Answer: Error 137 in Epi2me TB-AMR Workflow
7 months ago by jared.andrews07 ★ 19k
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816
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Answer: Answer: Method to detect CNV in a large set of coverage profile ?
7 months ago by jared.andrews07 ★ 19k
3
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610
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Answer: Answer: What is the reason that all high throughput sequencing data for the human brain
7 months ago by jared.andrews07 ★ 19k
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757
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Answer: Answer: No Cluster ID's present when making UMAP for Joint RNA and ATAC analysis: Signac
7 months ago by jared.andrews07 ★ 19k
4
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521
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Answer: Answer: How can I check if a variant affects a TFBS?
7 months ago by jared.andrews07 ★ 19k
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1.6k
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Answer: Answer: Does mageck-vispr calculate differently than mageck?
8 months ago by jared.andrews07 ★ 19k
2
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1
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862
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Answer: Answer: How to make DiffBind Run Faster?
8 months ago by jared.andrews07 ★ 19k
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2.0k
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Answer: Answer: How to do datamining in bioinformatics
8 months ago by jared.andrews07 ★ 19k
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763
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Answer: Answer: Single-cell RNA differential expression with an unbalanced number of cells betwe
8 months ago by jared.andrews07 ★ 19k
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843
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Answer: Answer: Error function vst in DESeq2
8 months ago by jared.andrews07 ★ 19k
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1.0k
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Answer: Answer: How can I call somatic CNV in tumor and matched normal sample
8 months ago by jared.andrews07 ★ 19k
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446
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Answer: Answer: Tools for assigning putative enhacers to respective genes
8 months ago by jared.andrews07 ★ 19k
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1.2k
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Answer: Answer: Super ehancers calling
8 months ago by jared.andrews07 ★ 19k
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1.9k
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Answer: Answer: Transcriptome Improvement Using Cell Ranger Count vs. ARC for RNA-Seq Data from
8 months ago by jared.andrews07 ★ 19k
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561
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Answer: Answer: Harmony integration of integarted samples
8 months ago by jared.andrews07 ★ 19k
2
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715
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Answer: Answer: Looking for some guidance regarding motif ontology
8 months ago by jared.andrews07 ★ 19k
2
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0
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1.8k
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Answer: Answer: Seeking Advice: Best Network-based Backup Solutions (NAS or Alternatives) for a
9 months ago by jared.andrews07 ★ 19k
2
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1
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1.6k
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Answer: Answer: Trying to understand basic DiffBind usage
9 months ago by jared.andrews07 ★ 19k
1
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0
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722
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Answer: Answer: Creating a signature matrix using CibersortX
10 months ago by jared.andrews07 ★ 19k
677 results • Page 1 of 14
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