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2
votes
2
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3.0k
views
Answer: A: calling a function using glob.glob
6.0 years ago by Dan D 7.4k
3
votes
2
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1.9k
views
Answer: A: How to extract whole gene sequence with 5' and 3' UTR from genome
6.4 years ago by Dan D 7.4k
3
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0
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1.1k
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Answer: A: How can I retrieve the info to recreate this figure for my own data?
6.4 years ago by Dan D 7.4k
3
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0
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3.6k
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Answer: A: Piping a bam file to samtools calmd
6.4 years ago by Dan D 7.4k
0
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1
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1.4k
views
Answer: A: Meaning of -r in Tophat 2
6.6 years ago by Dan D 7.4k
1
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2
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3.1k
views
Answer: A: Picard MarkDuplicates.jar error
6.6 years ago by Dan D 7.4k
1
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1
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3.1k
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Answer: A: Converting Bedgraph to coverage
6.6 years ago by Dan D 7.4k
0
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1
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3.6k
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Answer: A: fastqc and coverage
6.6 years ago by Dan D 7.4k
0
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1
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2.6k
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Answer: A: IGV Visualisation Problem
6.8 years ago by Dan D 7.4k
3
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0
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3.8k
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Answer: A: Illumina's HiSeq strange Phred quality score
7.1 years ago by Dan D 7.4k
5
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1
reply
3.5k
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Answer: A: samtools flagstat result is different from samtools view result
7.2 years ago by Dan D 7.4k
3
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0
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3.0k
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Answer: A: Bioinformatics for a medical student with interest in genetics
7.2 years ago by Dan D 7.4k
4
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2
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6.3k
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Answer: A: Bioinformatics Mobile App
7.3 years ago by Dan D 7.4k
2
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2
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6.3k
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Answer: A: Bioinformatics Mobile App
7.3 years ago by Dan D 7.4k
4
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2
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4.9k
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Answer: A: Illumina X ten samples have phred scores out of range [0,41]
7.3 years ago by Dan D 7.4k
0
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0
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1.6k
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Answer: Answer: Java api or library to calculate hydrogen bonds of a protein
updated 10 months ago by 39k • written 7.3 years ago by 7.4k
0
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0
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2.8k
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Answer: A: FASTA and FASTQ examples
7.5 years ago by Dan D 7.4k
1
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0
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6.5k
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Answer: Answer: Translation of Codons into amino acid sequence
updated 9 months ago by 39k • written 7.6 years ago by 7.4k
1
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1
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2.0k
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Answer: Answer: Can something like this be done in IGV or other better browsers
updated 8 months ago by 39k • written 7.7 years ago by 7.4k
0
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0
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2.9k
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Answer: Answer: run picard on all bam files in directory
updated 8 months ago by 39k • written 7.7 years ago by 7.4k
1
vote
1
reply
19k
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Answer: Answer: Where to download refseq gene data
updated 8 months ago by 39k • written 7.8 years ago by 7.4k
4
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1
reply
5.6k
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Answer: Answer: Perl6 and the Future of Bioinformatics - Compatibility and Integration
updated 8 months ago by 39k • written 7.8 years ago by 7.4k
3
votes
2
replies
1.8k
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Answer: Answer: unzipping my file in fedora
updated 8 months ago by 39k • written 7.8 years ago by 7.4k
1
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0
replies
4.3k
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Answer: A: paired end quality filtering
7.8 years ago by Dan D 7.4k
1
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1
reply
1.7k
views
Answer: A: adapter letters for cutadapt
7.8 years ago by Dan D 7.4k
6
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1
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6.6k
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Answer: Answer: Help a beginner NGS data analyst to face the programming interview
updated 8 months ago by 39k • written 7.8 years ago by 7.4k
3
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0
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7.5k
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Answer: Answer: large insertion/deletion detection from NGS data
updated 7 months ago by 39k • written 7.8 years ago by 7.4k
1
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0
replies
2.2k
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Answer: A: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
7.9 years ago by Dan D 7.4k
3
votes
0
replies
1.5k
views
Answer: Answer: Fastq reads mapped to the desired position on reference genome
updated 6 months ago by 39k • written 7.9 years ago by 7.4k
0
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0
replies
5.4k
views
Answer: Answer: gVCF from VCF and BAM
updated 5 months ago by 39k • written 8.0 years ago by 7.4k
4
votes
3
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6.2k
views
Answer: A: How to ignore bases with bcl2fastq2 --use-bases-mask
8.0 years ago by Dan D 7.4k
3
votes
1
reply
2.0k
views
Answer: Answer: Can I always use Galaxy?
updated 4 months ago by 39k • written 8.1 years ago by 7.4k
3
votes
0
replies
3.5k
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Answer: Answer: sequence in forward seq files but not in the reverse files
updated 4 months ago by 39k • written 8.1 years ago by 7.4k
4
votes
0
replies
7.1k
views
Answer: Answer: Filtering Stream Bam Output Idealy From Pysam/Python
updated 11 months ago by 39k • written 8.1 years ago by 7.4k
1
vote
2
replies
3.3k
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Answer: Answer: using GenomeCoverageBed tool
updated 4 months ago by 39k • written 8.1 years ago by 7.4k
3
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1
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5.3k
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Answer: A: Is Smith Waterman ever used?
8.1 years ago by Dan D 7.4k
0
votes
0
replies
5.2k
views
Answer: Answer: What are acceptable SNP QUAL and GQ thresholds to filter on?
updated 3 months ago by 39k • written 8.1 years ago by 7.4k
0
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0
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2.5k
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Answer: Answer: Illumina CASAVA runParameters.xml
updated 11 months ago by 39k • written 8.1 years ago by 7.4k
1
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1
reply
4.1k
views
Answer: A: How to use my own genome on UCSC browser?
8.1 years ago by Dan D 7.4k
8
votes
2
replies
10k
views
Answer: C: How to subset a bed or gtf file to some genes of interest?
8.1 years ago by Dan D 7.4k
5
votes
2
replies
5.7k
views
Answer: A: Optimal design for bioinformatics "lab" space?
8.1 years ago by Dan D 7.4k
3
votes
1
reply
2.3k
views
Answer: Answer: Extract 6mer and headers from fasta and compile into list
updated 11 months ago by 39k • written 8.1 years ago by 7.4k
4
votes
2
replies
3.1k
views
Answer: Answer: Which is better for job opportunities: Metagenomics OR Plant biotechnology
updated 11 months ago by 39k • written 8.2 years ago by 7.4k
0
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1
reply
1.3k
views
Answer: Answer: number of refseq genes of dog
updated 11 months ago by 39k • written 8.2 years ago by 7.4k
2
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0
replies
3.4k
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Answer: Answer: picard Hs metrics and MarkDuplicates
updated 11 months ago by 39k • written 8.2 years ago by 7.4k
0
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0
replies
1.7k
views
Answer: Answer: how to calculate elment compostion of fasta protein file using biojava?
updated 12 months ago by 39k • written 8.2 years ago by 7.4k
0
votes
3
replies
2.5k
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Answer: Answer: simulation of DNA-Seq paired-end data
updated 12 months ago by 39k • written 8.2 years ago by 7.4k
1
vote
1
reply
2.5k
views
Answer: A: Is this a .bed file? If so, why is it not importing into IGV properly?
8.2 years ago by Dan D 7.4k
2
votes
0
replies
12k
views
Answer: Answer: Is Software Development a key part of Bioinformatics?
updated 9 months ago by 39k • written 8.4 years ago by 7.4k
2
votes
0
replies
2.1k
views
Answer: Answer: quality filtering of Miseq dataset
updated 15 months ago by 39k • written 8.5 years ago by 7.4k
200 results • Page 2 of 4
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