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Showing :
answers
2
votes
2
replies
3.5k
views
Answer:
A: calling a function using glob.glob
6.8 years ago by
Dan D
7.4k
3
votes
2
replies
2.2k
views
Answer:
A: How to extract whole gene sequence with 5' and 3' UTR from genome
7.3 years ago by
Dan D
7.4k
3
votes
0
replies
1.3k
views
Answer:
A: How can I retrieve the info to recreate this figure for my own data?
7.3 years ago by
Dan D
7.4k
4
votes
0
replies
4.0k
views
Answer:
A: Piping a bam file to samtools calmd
7.3 years ago by
Dan D
7.4k
0
votes
1
reply
1.6k
views
Answer:
A: Meaning of -r in Tophat 2
7.5 years ago by
Dan D
7.4k
1
vote
2
replies
3.4k
views
Answer:
A: Picard MarkDuplicates.jar error
7.5 years ago by
Dan D
7.4k
1
vote
1
reply
3.4k
views
Answer:
A: Converting Bedgraph to coverage
7.5 years ago by
Dan D
7.4k
0
votes
1
reply
4.2k
views
Answer:
A: fastqc and coverage
7.5 years ago by
Dan D
7.4k
0
votes
1
reply
2.9k
views
Answer:
A: IGV Visualisation Problem
7.7 years ago by
Dan D
7.4k
3
votes
0
replies
4.1k
views
Answer:
A: Illumina's HiSeq strange Phred quality score
7.9 years ago by
Dan D
7.4k
5
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1
reply
3.8k
views
Answer:
A: samtools flagstat result is different from samtools view result
8.1 years ago by
Dan D
7.4k
3
votes
0
replies
3.4k
views
Answer:
A: Bioinformatics for a medical student with interest in genetics
8.1 years ago by
Dan D
7.4k
4
votes
2
replies
8.3k
views
Answer:
A: Bioinformatics Mobile App
8.2 years ago by
Dan D
7.4k
2
votes
2
replies
8.3k
views
Answer:
A: Bioinformatics Mobile App
8.2 years ago by
Dan D
7.4k
4
votes
2
replies
5.4k
views
Answer:
A: Illumina X ten samples have phred scores out of range [0,41]
8.2 years ago by
Dan D
7.4k
0
votes
0
replies
1.7k
views
Answer:
Answer: Java api or library to calculate hydrogen bonds of a protein
updated 21 months ago by
Ram
43k • written 8.2 years ago by
Dan D
7.4k
0
votes
0
replies
3.1k
views
Answer:
A: FASTA and FASTQ examples
8.4 years ago by
Dan D
7.4k
1
vote
0
replies
7.5k
views
Answer:
Answer: Translation of Codons into amino acid sequence
updated 20 months ago by
Ram
43k • written 8.5 years ago by
Dan D
7.4k
1
vote
1
reply
2.2k
views
Answer:
Answer: Can something like this be done in IGV or other better browsers
updated 19 months ago by
Ram
43k • written 8.6 years ago by
Dan D
7.4k
0
votes
0
replies
3.2k
views
Answer:
Answer: run picard on all bam files in directory
updated 19 months ago by
Ram
43k • written 8.6 years ago by
Dan D
7.4k
1
vote
1
reply
21k
views
Answer:
Answer: Where to download refseq gene data
updated 19 months ago by
Ram
43k • written 8.7 years ago by
Dan D
7.4k
4
votes
1
reply
6.3k
views
Answer:
Answer: Perl6 and the Future of Bioinformatics - Compatibility and Integration
updated 19 months ago by
Ram
43k • written 8.7 years ago by
Dan D
7.4k
3
votes
2
replies
2.1k
views
Answer:
Answer: unzipping my file in fedora
updated 19 months ago by
Ram
43k • written 8.7 years ago by
Dan D
7.4k
1
vote
0
replies
4.5k
views
Answer:
A: paired end quality filtering
8.7 years ago by
Dan D
7.4k
1
vote
1
reply
1.8k
views
Answer:
A: adapter letters for cutadapt
8.7 years ago by
Dan D
7.4k
6
votes
1
reply
7.4k
views
Answer:
Answer: Help a beginner NGS data analyst to face the programming interview
updated 19 months ago by
Ram
43k • written 8.7 years ago by
Dan D
7.4k
3
votes
0
replies
7.9k
views
Answer:
Answer: large insertion/deletion detection from NGS data
updated 18 months ago by
Ram
43k • written 8.7 years ago by
Dan D
7.4k
1
vote
0
replies
2.5k
views
Answer:
A: Check is RNA-seq mapping (tophat) is performed ok (hg38)?
8.8 years ago by
Dan D
7.4k
3
votes
0
replies
1.8k
views
Answer:
Answer: Fastq reads mapped to the desired position on reference genome
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Dan D
7.4k
0
votes
0
replies
5.9k
views
Answer:
Answer: gVCF from VCF and BAM
updated 15 months ago by
Ram
43k • written 8.9 years ago by
Dan D
7.4k
4
votes
3
replies
6.6k
views
Answer:
A: How to ignore bases with bcl2fastq2 --use-bases-mask
8.9 years ago by
Dan D
7.4k
3
votes
1
reply
2.4k
views
Answer:
Answer: Can I always use Galaxy?
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
3
votes
0
replies
4.0k
views
Answer:
Answer: sequence in forward seq files but not in the reverse files
updated 15 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
4
votes
0
replies
7.8k
views
Answer:
Answer: Filtering Stream Bam Output Idealy From Pysam/Python
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
1
vote
2
replies
3.6k
views
Answer:
Answer: using GenomeCoverageBed tool
updated 14 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
3
votes
1
reply
6.0k
views
Answer:
A: Is Smith Waterman ever used?
9.0 years ago by
Dan D
7.4k
0
votes
0
replies
5.6k
views
Answer:
Answer: What are acceptable SNP QUAL and GQ thresholds to filter on?
updated 14 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
0
votes
0
replies
2.7k
views
Answer:
Answer: Illumina CASAVA runParameters.xml
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
1
vote
1
reply
4.7k
views
Answer:
A: How to use my own genome on UCSC browser?
9.0 years ago by
Dan D
7.4k
8
votes
2
replies
11k
views
Answer:
C: How to subset a bed or gtf file to some genes of interest?
9.0 years ago by
Dan D
7.4k
5
votes
2
replies
6.7k
views
Answer:
A: Optimal design for bioinformatics "lab" space?
9.0 years ago by
Dan D
7.4k
3
votes
1
reply
2.7k
views
Answer:
Answer: Extract 6mer and headers from fasta and compile into list
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
4
votes
2
replies
3.5k
views
Answer:
Answer: Which is better for job opportunities: Metagenomics OR Plant biotechnology
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
0
votes
1
reply
1.5k
views
Answer:
Answer: number of refseq genes of dog
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
2
votes
0
replies
3.6k
views
Answer:
Answer: picard Hs metrics and MarkDuplicates
updated 22 months ago by
Ram
43k • written 9.0 years ago by
Dan D
7.4k
0
votes
0
replies
1.8k
views
Answer:
Answer: how to calculate elment compostion of fasta protein file using biojava?
updated 23 months ago by
Ram
43k • written 9.1 years ago by
Dan D
7.4k
0
votes
3
replies
2.8k
views
Answer:
Answer: simulation of DNA-Seq paired-end data
updated 23 months ago by
Ram
43k • written 9.1 years ago by
Dan D
7.4k
1
vote
1
reply
3.4k
views
Answer:
A: Is this a .bed file? If so, why is it not importing into IGV properly?
9.1 years ago by
Dan D
7.4k
2
votes
0
replies
14k
views
Answer:
Answer: Is Software Development a key part of Bioinformatics?
updated 20 months ago by
Ram
43k • written 9.3 years ago by
Dan D
7.4k
2
votes
0
replies
2.3k
views
Answer:
Answer: quality filtering of Miseq dataset
updated 2.1 years ago by
Ram
43k • written 9.4 years ago by
Dan D
7.4k
200 results • Page
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