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comments
2
votes
1
reply
3.8k
views
Comment:
C: BWA and SOAP2 cannot map a particular sequence which exists in the genome
updated 5.2 years ago by
Ram
44k • written 10.6 years ago by
Dan D
7.4k
2
votes
0
replies
4.4k
views
Answer:
A: How can I get the informaiton about base quality(BQ) in VCF file?
updated 5.2 years ago by
Ram
44k • written 10.6 years ago by
Dan D
7.4k
0
votes
0
replies
7.8k
views
Comment:
C: Bwa or bowtie for mapping mulitple genomes
updated 5.2 years ago by
Ram
44k • written 10.6 years ago by
Dan D
7.4k
3
votes
1
reply
7.8k
views
Answer:
A: Bwa or bowtie for mapping mulitple genomes
updated 5.2 years ago by
Ram
44k • written 10.6 years ago by
Dan D
7.4k
0
votes
1
reply
12k
views
Comment:
C: Fastx_Collapser Has No Fastq Output
updated 5.2 years ago by
Ram
44k • written 11.2 years ago by
Dan D
7.4k
0
votes
1
reply
12k
views
Comment:
C: Fastx_Collapser Has No Fastq Output
updated 5.2 years ago by
Ram
44k • written 11.2 years ago by
Dan D
7.4k
15
votes
1
reply
29k
views
Answer:
A: Human dna reference file with no prefix 'chr'
updated 5.2 years ago by
Ram
44k • written 10.1 years ago by
Dan D
7.4k
0
votes
1
reply
29k
views
Comment:
C: Human dna reference file with no prefix 'chr'
updated 5.2 years ago by
Ram
44k • written 10.1 years ago by
Dan D
7.4k
1
vote
2
replies
4.1k
views
Answer:
A: interval_list for hg38
5.3 years ago by
Dan D
7.4k
0
votes
0
replies
2.7k
views
Answer:
C: Does anyone know how the Y axis (% of reference) for the "coverage distribution"
updated 5.5 years ago by
Ram
44k • written 10.4 years ago by
Dan D
7.4k
0
votes
0
replies
4.3k
views
Comment:
C: How to interpret reference homozygous genotype in the VCF file generated by GATK
updated 5.5 years ago by
Ram
44k • written 10.2 years ago by
Dan D
7.4k
0
votes
2
replies
4.3k
views
Answer:
A: How to interpret reference homozygous genotype in the VCF file generated by GATK
updated 5.5 years ago by
Ram
44k • written 10.2 years ago by
Dan D
7.4k
1
vote
0
replies
5.9k
views
Answer:
A: Demultiplexing bcl files into fastq files
updated 5.6 years ago by
Ram
44k • written 7.3 years ago by
Dan D
7.4k
4
votes
1
reply
4.6k
views
Answer:
A: Get Random Alignments From Sam File
updated 5.9 years ago by
Ram
44k • written 11.2 years ago by
Dan D
7.4k
0
votes
1
reply
16k
views
Answer:
A: Demultiplexing fastq files with dual barcodes
updated 6.0 years ago by
Ram
44k • written 9.6 years ago by
Dan D
7.4k
0
votes
1
reply
16k
views
Comment:
C: Demultiplexing fastq files with dual barcodes
updated 6.0 years ago by
Ram
44k • written 9.6 years ago by
Dan D
7.4k
8
votes
12
replies
4.1k
views
Is there any precedent for considering marked duplicates when calculating coverage in high-depth whole-exome sequencing?
exome
exome-seq
coverage
duplicates
updated 6.1 years ago by
marco_ul
• 0 • written 6.6 years ago by
Dan D
7.4k
0
votes
0
replies
2.1k
views
Comment:
C: Bioinformatics / Computational Biology PhD
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
2
votes
0
replies
2.8k
views
Answer:
A: Notable open source bioinformatics projects written in Java?
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
0
votes
1
reply
35k
views
Comment:
C: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 6.2 years ago by
Ram
44k • written 10.0 years ago by
Dan D
7.4k
0
votes
1
reply
35k
views
Comment:
C: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 6.2 years ago by
Ram
44k • written 10.0 years ago by
Dan D
7.4k
0
votes
1
reply
35k
views
Comment:
C: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 6.2 years ago by
Ram
44k • written 10.0 years ago by
Dan D
7.4k
0
votes
1
reply
35k
views
Comment:
C: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 6.2 years ago by
Ram
44k • written 10.0 years ago by
Dan D
7.4k
1
vote
1
reply
3.3k
views
Comment:
C: Bam file doesn't show on IGV and pileup VCF has only header
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
1
vote
1
reply
3.3k
views
Comment:
C: Bam file doesn't show on IGV and pileup VCF has only header
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
1
vote
1
reply
3.3k
views
Comment:
C: Bam file doesn't show on IGV and pileup VCF has only header
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
21
votes
1
reply
35k
views
Answer:
A: I loaded a BAM (RNA-seq) file into IGV but cant see anything!
updated 6.2 years ago by
Ram
44k • written 10.0 years ago by
Dan D
7.4k
1
vote
1
reply
3.3k
views
Comment:
C: Bam file doesn't show on IGV and pileup VCF has only header
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
0
votes
1
reply
2.0k
views
Answer:
A: Visualization of chromosomal locations
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
2
votes
1
reply
1.5k
views
Answer:
A: Hetero and Euchromatin
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
0
votes
0
replies
2.5k
views
Comment:
C: Internal memory allocator is full!
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
0
votes
0
replies
3.4k
views
Comment:
C: Cutadapt 1.9.1 error
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
0
votes
1
reply
1.6k
views
Comment:
C: How to get access to dreamchallenge.org source codes submitted by different team
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
2
votes
0
replies
2.5k
views
Answer:
A: Rat rn5 GTF format
updated 6.2 years ago by
Ram
44k • written 8.8 years ago by
Dan D
7.4k
0
votes
0
replies
10k
views
Answer:
A: Project Euler Equivalent For Bioinformatics?
updated 6.2 years ago by
Ram
44k • written 10.6 years ago by
Dan D
7.4k
1
vote
0
replies
4.3k
views
Answer:
A: using bash variable in picard MarkDuplicates command
6.4 years ago by
Dan D
7.4k
0
votes
0
replies
1.3k
views
Job:
Work with me at HudsonAlpha Institute for Biotechnology in Huntsville, AL
data-science
big-data
updated 18 months ago by
Ram
44k • written 6.5 years ago by
Dan D
7.4k
0
votes
0
replies
1.1k
views
Comment:
C: Associate Office Manager, Qiagen, Cary, NC, USA
6.6 years ago by
Dan D
7.4k
0
votes
2
replies
4.1k
views
Comment:
C: Is there any precedent for considering marked duplicates when calculating covera
6.6 years ago by
Dan D
7.4k
0
votes
0
replies
4.1k
views
Comment:
C: Is there any precedent for considering marked duplicates when calculating covera
6.6 years ago by
Dan D
7.4k
0
votes
1
reply
4.1k
views
Comment:
C: Is there any precedent for considering marked duplicates when calculating covera
6.6 years ago by
Dan D
7.4k
1
vote
1
reply
3.7k
views
Answer:
A: Removing Indices using Cutadapt
6.6 years ago by
Dan D
7.4k
0
votes
0
replies
1.7k
views
Comment:
C: s. pombe alignment
6.6 years ago by
Dan D
7.4k
0
votes
1
reply
11k
views
Comment:
C: IGV command line control
6.8 years ago by
Dan D
7.4k
2
votes
0
replies
37k
views
Comment:
C: Illumina Instrument Type from fastq?
6.8 years ago by
Dan D
7.4k
0
votes
0
replies
37k
views
Comment:
C: Illumina Instrument Type from fastq?
6.8 years ago by
Dan D
7.4k
1
vote
0
replies
1.9k
views
Answer:
A: How does picard CollectWGSmetrics estimate coverage on Soft-Clipped Reads?
6.8 years ago by
Dan D
7.4k
0
votes
1
reply
14k
views
Comment:
C: Writing vcf file headers
6.9 years ago by
Dan D
7.4k
0
votes
0
replies
1.0k
views
Comment:
C: Starting Bioinformatics course online
6.9 years ago by
Dan D
7.4k
1
vote
0
replies
5.5k
views
Answer:
C: Faster reading sequences from a fastq file
6.9 years ago by
Dan D
7.4k
607 results • Page
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