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2
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0
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2.4k
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Answer: A: Cancer data download with normal sample
6.8 years ago by Kevin Blighe ★ 90k
3
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1
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4.0k
views
Answer: A: Pick soft threshold for co-expression analysis and filtering step
6.8 years ago by Kevin Blighe ★ 90k
0
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0
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3.7k
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Comment: C: LIMMA analysis with 2 samples in comparison group
6.8 years ago by Kevin Blighe ★ 90k
0
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0
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1.4k
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Comment: C: Same Values In Limma/Microarray Differential Expression
6.8 years ago by Kevin Blighe ★ 90k
6
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1
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3.3k
views
Answer: A: Normalizing transcriptome data by tissue type
6.8 years ago by Kevin Blighe ★ 90k
0
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1
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4.8k
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Comment: C: how to provide background genes to do GO by david
6.8 years ago by Kevin Blighe ★ 90k
0
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0
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2.2k
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Comment: C: How to merge several FPKM files?
6.8 years ago by Kevin Blighe ★ 90k
0
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0
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2.2k
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Comment: C: How to merge several FPKM files?
6.8 years ago by Kevin Blighe ★ 90k
0
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1
reply
2.6k
views
Comment: C: RNAseq Normalization for eQTL Mapping?
6.8 years ago by Kevin Blighe ★ 90k
2
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0
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2.2k
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Answer: A: Differential Methylation Analysis using continuous outcome
6.8 years ago by Kevin Blighe ★ 90k
1
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1
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2.8k
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Comment: C: mismatch sample number TCGA ovary cancer between recount and GDC portal
6.8 years ago by Kevin Blighe ★ 90k
0
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0
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1.3k
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Comment: C: Protein-Protein interaction modelling without 3D structure
6.8 years ago by Kevin Blighe ★ 90k
0
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0
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2.9k
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Comment: C: How to trim both pair end reads and remove low quality reads
6.8 years ago by Kevin Blighe ★ 90k
1
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1
reply
2.8k
views
Comment: C: mismatch sample number TCGA ovary cancer between recount and GDC portal
6.8 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
2.8k
views
Comment: C: mismatch sample number TCGA ovary cancer between recount and GDC portal
6.8 years ago by Kevin Blighe ★ 90k
2
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0
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1.7k
views
Answer: A: Meta_analysis of different platforms of microarray data
6.9 years ago by Kevin Blighe ★ 90k
0
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1
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2.2k
views
Comment: C: How to merge several FPKM files?
6.9 years ago by Kevin Blighe ★ 90k
0
votes
1
reply
2.6k
views
Comment: C: can i used RNA seq normalized data of PAAD, downloaded from TCGA with the help o
6.9 years ago by Kevin Blighe ★ 90k
0
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0
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3.5k
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Comment: C: What can be done to separate the healthy and patient samples in PCA plot and Dis
6.9 years ago by Kevin Blighe ★ 90k
0
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1
reply
12k
views
Comment: C: Generating FPKM matrix accross all samples after stringtie
6.9 years ago by Kevin Blighe ★ 90k
0
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0
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7.2k
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Comment: C: How to change conditions in DESeq2
6.9 years ago by Kevin Blighe ★ 90k
0
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1
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3.5k
views
Comment: C: What can be done to separate the healthy and patient samples in PCA plot and Dis
6.9 years ago by Kevin Blighe ★ 90k
0
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0
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16k
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Comment: C: What is RPKM/FPKM > 1 or 3 or 5?
6.9 years ago by Kevin Blighe ★ 90k
1
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1
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16k
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Comment: C: What is RPKM/FPKM > 1 or 3 or 5?
6.9 years ago by Kevin Blighe ★ 90k
0
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1
reply
2.6k
views
Comment: C: can i used RNA seq normalized data of PAAD, downloaded from TCGA with the help o
6.9 years ago by Kevin Blighe ★ 90k
0
votes
1
reply
2.2k
views
Comment: C: How to merge several FPKM files?
6.9 years ago by Kevin Blighe ★ 90k
1
vote
0
replies
2.6k
views
Comment: C: can i used RNA seq normalized data of PAAD, downloaded from TCGA with the help o
6.9 years ago by Kevin Blighe ★ 90k
0
votes
0
replies
2.6k
views
Comment: C: can i used RNA seq normalized data of PAAD, downloaded from TCGA with the help o
6.9 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
7.7k
views
Comment: C: GDC server down???
6.9 years ago by Kevin Blighe ★ 90k
1
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0
replies
2.2k
views
Comment: C: Why some tumors are grouped with the controls?
6.9 years ago by Kevin Blighe ★ 90k
0
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1
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2.2k
views
Comment: C: Why some tumors are grouped with the controls?
6.9 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
8.5k
views
Comment: C: Building a predictive model by a list of genes
6.9 years ago by Kevin Blighe ★ 90k
6
votes
2
replies
2.2k
views
Answer: A: Why some tumors are grouped with the controls?
6.9 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
8.5k
views
Comment: C: Building a predictive model by a list of genes
6.9 years ago by Kevin Blighe ★ 90k
1
vote
0
replies
8.5k
views
Comment: C: Building a predictive model by a list of genes
6.9 years ago by Kevin Blighe ★ 90k
1
vote
2
replies
8.5k
views
Comment: C: Building a predictive model by a list of genes
6.9 years ago by Kevin Blighe ★ 90k
3
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1
reply
8.5k
views
Answer: A: Multinomial elastic net implementation on microarray dataset , error at lognet a
6.9 years ago by Kevin Blighe ★ 90k
0
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0
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3.6k
views
Comment: C: DESEQ2 application on control vs treatment
6.9 years ago by Kevin Blighe ★ 90k
0
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0
replies
4.2k
views
Comment: C: RNA-Seq database of cancer patients other than TCGA and ICGC?
6.9 years ago by Kevin Blighe ★ 90k
1
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0
replies
1.5k
views
Comment: C: Subset of samples from a large hap map dataset
6.9 years ago by Kevin Blighe ★ 90k
0
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0
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4.8k
views
Comment: C: how to calculate or extract Circular RNA expression via RNA-seq data
6.9 years ago by Kevin Blighe ★ 90k
0
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0
replies
2.4k
views
Comment: C: how to evaluate the quality of modules analysisd from WGCNA
6.9 years ago by Kevin Blighe ★ 90k
0
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1
reply
3.4k
views
Comment: C: to get each covariate with PC loading in PCA
6.9 years ago by Kevin Blighe ★ 90k
0
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0
replies
1.3k
views
Comment: C: question about validation of differentially expressed genes
6.9 years ago by Kevin Blighe ★ 90k
0
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1
reply
2.4k
views
Answer: A: how to find hubgene in two modules analysisd from WGCNA
6.9 years ago by Kevin Blighe ★ 90k
8
votes
1
reply
16k
views
Answer: A: How to find the hub genes in the gene co-expression network constructed by WGCNA
6.9 years ago by Kevin Blighe ★ 90k
0
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1
reply
3.4k
views
Comment: C: to get each covariate with PC loading in PCA
6.9 years ago by Kevin Blighe ★ 90k
12
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3
replies
7.2k
views
Answer: A: Some clarification on enrichment analyses and pathway analyses?
6.9 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
1.9k
views
Comment: C: Why should the LD plot (LD heatmap) be created in control samples, not cases?
6.9 years ago by Kevin Blighe ★ 90k
1
vote
0
replies
8.5k
views
Comment: C: Building a predictive model by a list of genes
6.9 years ago by Kevin Blighe ★ 90k
10,067 results • Page 111 of 202
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