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1.4k
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Comment:
C: How many samples needed for run GISTIC2 to get meaningful results
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
24k
views
Comment:
C: Best tool for variant calling
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
24k
views
Comment:
C: Best tool for variant calling
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
25k
views
Comment:
C: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
25k
views
Comment:
C: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
0
replies
2.9k
views
Comment:
C: Python Data Visualization Course. Last 3 spots left
7.0 years ago by
Kevin Blighe
★ 90k
3
votes
0
replies
2.9k
views
Comment:
C: Python Data Visualization Course. Last 3 spots left
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
2.1k
views
Comment:
C: Ask help for TCGAnalyze_SurvivalCoxNET function.
7.0 years ago by
Kevin Blighe
★ 90k
12
votes
1
reply
15k
views
Answer:
A: Reporting p.value for my PCA results
7.0 years ago by
Kevin Blighe
★ 90k
6
votes
3
replies
8.1k
views
Answer:
A: How to find p-value of the modules in WGCNA?
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
0
replies
5.3k
views
Answer:
A: Removing ancestral outliers in GWAS
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
1
reply
14k
views
Comment:
C: Help explaining MDS plot of RNAseq?
7.0 years ago by
Kevin Blighe
★ 90k
4
votes
0
replies
2.2k
views
Answer:
A: What can you learn about your samples just by looking at normalized read counts?
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
3.2k
views
Answer:
A: Signaling in PC3 and PC4
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
8.9k
views
Comment:
C: Stuck on calculating principal components
7.0 years ago by
Kevin Blighe
★ 90k
3
votes
1
reply
3.2k
views
Answer:
A: Weighted Gene Expression Network
7.0 years ago by
Kevin Blighe
★ 90k
4
votes
1
reply
6.2k
views
Comment:
C: PCA plot for TOP 500 genes + prcomp
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
7.9k
views
Comment:
C: Adding Percentage in PCA
7.0 years ago by
Kevin Blighe
★ 90k
2
votes
1
reply
2.7k
views
Answer:
A: Plink Logistic regression controlling for pop. structure in tri-hybrid admixed p
7.0 years ago by
Kevin Blighe
★ 90k
4
votes
1
reply
7.7k
views
Answer:
A: How to get genes that make up principal components
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
1
reply
15k
views
Comment:
C: Principal Component Analysis: How many most variable genes should I take?
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
3.0k
views
Comment:
C: RNA co-expression: shall I use differential co-expression or not?
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
5.8k
views
Comment:
C: Integrating RNA-Seq datasets from different experiment
7.0 years ago by
Kevin Blighe
★ 90k
3
votes
2
replies
16k
views
Comment:
C: Extracting features or gene from PCA after calculating PCA for downstream analys
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
16k
views
Comment:
C: Extracting features or gene from PCA after calculating PCA for downstream analys
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
16k
views
Comment:
C: Extracting features or gene from PCA after calculating PCA for downstream analys
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
1
reply
16k
views
Comment:
C: Extracting features or gene from PCA after calculating PCA for downstream analys
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
7.8k
views
Answer:
A: Eigen genes using WGCNA
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
2
replies
25k
views
Comment:
C: WGCNA modules and categorical traits relationship
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
2
replies
25k
views
Comment:
C: WGCNA modules and categorical traits relationship
7.0 years ago by
Kevin Blighe
★ 90k
10
votes
4
replies
25k
views
Answer:
A: WGCNA modules and categorical traits relationship
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
7.6k
views
Comment:
C: TOPGO- how to do GO enrichment using a custom go database?
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
2.1k
views
Comment:
C: heat map clustering
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
3.9k
views
Comment:
C: Convert Phase Output To Plink
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
4.0k
views
Comment:
C: fastPHASE output format to PLINK input format
7.0 years ago by
Kevin Blighe
★ 90k
3
votes
3
replies
7.4k
views
Answer:
A: EnhancedVolcano questions on parameters, arguments can set
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
7.5k
views
Comment:
C: Showing up and down regulated GO and pathway using enrichR and ggplot2
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
1.3k
views
Comment:
C: The difference betewwn mutations and CNAs in cBioPortal Select Genomic Profiles
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
7.5k
views
Comment:
C: Showing up and down regulated GO and pathway using enrichR and ggplot2
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
0
replies
3.8k
views
Comment:
C: DESeq2 and P values
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
1.8k
views
Comment:
C: Help for TCGA CNV data error.
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
1
reply
11k
views
Comment:
C: Deseq2 : Filtering low counts before per sample
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
0
replies
1.5k
views
Answer:
A: RTqPCR Differential Expression with multivariate linnear models
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
7.5k
views
Comment:
C: Showing up and down regulated GO and pathway using enrichR and ggplot2
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
1.8k
views
Comment:
C: Help for TCGA CNV data error.
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
1
reply
1.8k
views
Answer:
A: Help for TCGA CNV data error.
7.0 years ago by
Kevin Blighe
★ 90k
3
votes
1
reply
4.8k
views
Answer:
A: Different samples order in .ped and phynotype data files
7.0 years ago by
Kevin Blighe
★ 90k
0
votes
0
replies
60k
views
Comment:
C: Network plot from expression data in R using igraph
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
1
reply
3.4k
views
Comment:
C: In GSEA, how can one "correlate" gene expression with categorical phenotype data
7.0 years ago by
Kevin Blighe
★ 90k
1
vote
1
reply
2.9k
views
Answer:
C: How to remove duplicate sites and inconsistent sites from a VCF?
7.0 years ago by
Kevin Blighe
★ 90k
10,067 results • Page
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