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3
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1
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13k
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Answer: A: cannot replicate the pheatmap scale function
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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3.7k
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Comment: C: How to find CNV or CN state information from rawcopy output ?
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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6.0k
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Comment: C: How to add a regression line and change colors in ggplot smoothscatter?
7.1 years ago by Kevin Blighe ★ 90k
1
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0
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5.0k
views
Answer: A: Scatterplot with hexbin
7.1 years ago by Kevin Blighe ★ 90k
1
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1
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6.4k
views
Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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21k
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Comment: C: how to choose optimal K in Consensus clustering
7.1 years ago by Kevin Blighe ★ 90k
2
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1
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1.9k
views
Answer: A: differential gene expression analysis
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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1.3k
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Comment: C: Where can I download full transcriptome profiles for specific regions in the hum
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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1.7k
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Answer: C: Should I remove samples after normalization of miRNA seq read counts ?
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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3.7k
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Comment: C: How can I convert heterozygous genotype data to missing data?
7.1 years ago by Kevin Blighe ★ 90k
1
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1
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10k
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Comment: C: log transformation of rpkm
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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1.3k
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Answer: A: Where can I download full transcriptome profiles for specific regions in the hum
7.1 years ago by Kevin Blighe ★ 90k
3
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0
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1.6k
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Answer: A: Differential expression analysis using GFOLD and DESeq2
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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6.4k
views
Comment: C: Affymetrix Human Genome U133 Plus 2.0 Array
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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2.1k
views
Comment: C: How can i increase variants accuracy?
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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984
views
Comment: C: How to filter constitutive expression genes and tissue-specific expression genes
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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3.3k
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Comment: C: Prune SNPs in LD with a list of SNPs
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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2.7k
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Comment: C: monocle how to identify branches
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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1.5k
views
Comment: C: Is there any website that shows the cell type for a given marker list?
7.1 years ago by Kevin Blighe ★ 90k
1
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1
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6.4k
views
Comment: C: TPKM vs FPKM
7.1 years ago by Kevin Blighe ★ 90k
1
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0
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1.9k
views
Comment: C: Using GenomicDataCommons R package to identify cases with both DNA methylation a
7.1 years ago by Kevin Blighe ★ 90k
1
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1
reply
2.0k
views
Comment: C: Draw gene-transcroption factor network starting from a list of gene
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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984
views
Comment: C: How to filter constitutive expression genes and tissue-specific expression genes
7.1 years ago by Kevin Blighe ★ 90k
0
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0
replies
1.8k
views
Comment: C: Convert ID gene from A. thaliana to Affymetrix code
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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1.9k
views
Comment: C: Extract 1KB upstream of specific gene in X chromosome
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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1.2k
views
Comment: C: seeing a larger file size (with more lines per file) when using 5' merging (vs.
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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2.8k
views
Answer: A: log transformation in the analysis of gene expression by chip-array
7.1 years ago by Kevin Blighe ★ 90k
1
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0
replies
5.9k
views
Comment: C: R code for Differential Gene Expression
7.1 years ago by Kevin Blighe ★ 90k
1
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1
reply
6.4k
views
Comment: C: TPKM vs FPKM
7.1 years ago by Kevin Blighe ★ 90k
5
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2
replies
10k
views
Answer: A: log transformation of rpkm
7.1 years ago by Kevin Blighe ★ 90k
1
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0
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2.6k
views
Answer: A: Fasta file from a gff file
7.1 years ago by Kevin Blighe ★ 90k
1
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0
replies
2.0k
views
Answer: A: No replicates in 1 group, which idea is the best to apply?
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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5.9k
views
Comment: C: R code for Differential Gene Expression
7.1 years ago by Kevin Blighe ★ 90k
0
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1
reply
3.7k
views
Comment: C: How to find CNV or CN state information from rawcopy output ?
7.1 years ago by Kevin Blighe ★ 90k
0
votes
0
replies
3.2k
views
Comment: C: Issue with bcftools csq phasing
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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3.2k
views
Comment: C: Issue with bcftools csq phasing
7.1 years ago by Kevin Blighe ★ 90k
1
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0
replies
15k
views
Comment: C: Using vcftools to filter SNPs by a linkage disequilibrium (r2) threshold
7.1 years ago by Kevin Blighe ★ 90k
0
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1
reply
4.4k
views
Comment: C: RNASeq - low correlation between samples
7.1 years ago by Kevin Blighe ★ 90k
0
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0
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1.5k
views
Comment: C: How to predict CNV based on Gene Expression dataset
7.1 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
15k
views
Comment: C: Using vcftools to filter SNPs by a linkage disequilibrium (r2) threshold
7.1 years ago by Kevin Blighe ★ 90k
1
vote
1
reply
30k
views
Comment: C: How to extract the list of genes from TCGA CNV data
7.1 years ago by Kevin Blighe ★ 90k
0
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1
reply
4.4k
views
Comment: C: RNASeq - low correlation between samples
7.1 years ago by Kevin Blighe ★ 90k
0
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1
reply
1.9k
views
Answer: A: Help in Python and AWK: Printing absolute difference value between consecutive r
7.1 years ago by Kevin Blighe ★ 90k
0
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0
replies
1.8k
views
Comment: C: WGCNA Data Cleaning
7.1 years ago by Kevin Blighe ★ 90k
0
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1
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4.4k
views
Comment: C: RNASeq - low correlation between samples
7.1 years ago by Kevin Blighe ★ 90k
3
votes
0
replies
27k
views
Answer: A: How to include complete labels names in R boxplot
7.1 years ago by Kevin Blighe ★ 90k
3
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0
replies
2.5k
views
Answer: A: how to de-aggregate a table in R
7.1 years ago by Kevin Blighe ★ 90k
0
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0
replies
3.4k
views
Comment: C: Can I put FF and FFPE samples together for RNA-seq data analysis
7.1 years ago by Kevin Blighe ★ 90k
0
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0
replies
6.0k
views
Comment: C: How to add a regression line and change colors in ggplot smoothscatter?
7.1 years ago by Kevin Blighe ★ 90k
1
vote
0
replies
10k
views
Comment: C: Time-course RNA-seq analysis in Deseq2
7.1 years ago by Kevin Blighe ★ 90k
10,067 results • Page 123 of 202
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