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3
votes
1
reply
9.6k
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Comment: C: Sample outlier detection in DESeq2
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
1.4k
views
Comment: C: Problem with downloading full microarray datasets with getGEO function
4.9 years ago by Kevin Blighe 89k
0
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0
replies
1.1k
views
Comment: C: whole exome variant filtering
4.9 years ago by Kevin Blighe 89k
1
vote
0
replies
1.6k
views
Comment: C: Pathway analysis of a list of possible cancer driver genes
4.9 years ago by Kevin Blighe 89k
5
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1
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1.6k
views
Answer: A: Pathway analysis of a list of possible cancer driver genes
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
976
views
Comment: C: How to do a statistical analysis with the trimal using a list as input?
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
3.5k
views
Answer: A: DESEq2 error - 'DESeqDataSet' object superclass 'RectangularData' not defined in
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
1.1k
views
Comment: C: whole exome variant filtering
4.9 years ago by Kevin Blighe 89k
1
vote
1
reply
2.4k
views
Comment: C: complexheatMap runtime error
4.9 years ago by Kevin Blighe 89k
5
votes
1
reply
6.1k
views
Answer: A: Filtering low variance genes for WGCNA
4.9 years ago by Kevin Blighe 89k
1
vote
0
replies
1.9k
views
Comment: C: CPM after ComBat-seq
4.9 years ago by Kevin Blighe 89k
1
vote
0
replies
1.4k
views
Comment: C: Quality checking by biological replicates
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
992
views
Comment: C: make file gcta
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
1.4k
views
Comment: C: Quality checking by biological replicates
4.9 years ago by Kevin Blighe 89k
12
votes
3
replies
15k
views
Answer: A: One-way ANOVA in R for many observations
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
15k
views
Comment: C: One-way ANOVA in R for many observations
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
1.0k
views
Comment: A: Categorize genotype data into 0s,1s and 2s to run GWAS
4.9 years ago by Kevin Blighe 89k
2
votes
1
reply
1.4k
views
Answer: A: Quality checking by biological replicates
4.9 years ago by Kevin Blighe 89k
1
vote
0
replies
1.5k
views
Comment: C: Detecting CNVs from BAM file
4.9 years ago by Kevin Blighe 89k
1
vote
2
replies
2.5k
views
Answer: A: Problem with Affymetrix cdf file
4.9 years ago by Kevin Blighe 89k
1
vote
2
replies
1.7k
views
Answer: A: How to map Affymetrix IDs to Gene Symbols using hgu133a.db R package?
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
1.2k
views
Comment: C: Hello! everone. I have a CDS transcript data and a reference genome, which softw
4.9 years ago by Kevin Blighe 89k
2
votes
1
reply
1.9k
views
Comment: C: CPM after ComBat-seq
4.9 years ago by Kevin Blighe 89k
3
votes
1
reply
1.9k
views
Answer: C: CPM after ComBat-seq
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
19k
views
Comment: C: Clusterprofiler error: No gene can be mapped
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
30k
views
Comment: C: How to extract the list of genes from TCGA CNV data
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
3.7k
views
Comment: C: Is anybody experiencing problems downloading from the SRA?
4.9 years ago by Kevin Blighe 89k
1
vote
1
reply
1.1k
views
Comment: C: remove batch effect of SILAC protein data
4.9 years ago by Kevin Blighe 89k
3
votes
2
replies
16k
views
Comment: Comment: Implement p-values and significance levels in boxplots for more of two groups wi
4.3 years ago by Kevin Blighe 89k
2
votes
1
reply
3.5k
views
Comment: C: Help with multi-factor Deseq analysis
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
2.2k
views
Comment: C: EnhancedVolcano custom color variables by log2FC and p-value
4.9 years ago by Kevin Blighe 89k
2
votes
0
replies
2.2k
views
Comment: A: EnhancedVolcano custom color variables by log2FC and p-value
4.9 years ago by Kevin Blighe 89k
4
votes
0
replies
3.6k
views
Answer: A: How Plink PCA output is used as covariates in PheWAS studies
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
4.2k
views
Comment: C: Why the p-value is 0, or how to keep the precision for small values?
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
4.5k
views
Comment: C: Getting a .vcf file from a Illumina SNPChip results (.bsc file)
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
4.5k
views
Comment: C: Getting a .vcf file from a Illumina SNPChip results (.bsc file)
4.9 years ago by Kevin Blighe 89k
1
vote
1
reply
2.9k
views
Answer: C: Using the Enhanced Volcano plot results in a "subscript out of bounds" error
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
2.8k
views
Comment: C: Ploidy Analysis in R
4.9 years ago by Kevin Blighe 89k
3
votes
0
replies
1.2k
views
Answer: A: Statistical analysis of non-numerical data
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
909
views
Comment: C: Filter rows below a given threshold
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
2.6k
views
Comment: C: No coverage in macs2 peak summit!
4.9 years ago by Kevin Blighe 89k
2
votes
0
replies
1.1k
views
Answer: A: A question in terms of definition
4.9 years ago by Kevin Blighe 89k
1
vote
1
reply
2.8k
views
Comment: C: Is there a way to use multiple processors (parallelize) to create a heatmap for
4.9 years ago by Kevin Blighe 89k
6
votes
3
replies
13k
views
Answer: A: GSEA preranking metric for RNA Seq
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
13k
views
Comment: C: GSEA preranking metric for RNA Seq
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
1.8k
views
Comment: C: Obtaining SNPs with large samples in a short time
4.9 years ago by Kevin Blighe 89k
1
vote
0
replies
4.2k
views
Comment: C: Kmeans in R for clustering on significant gene list by sample
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
8.1k
views
Comment: C: "Enhanced Volcano" package - how to set p adjusted cut off?
4.9 years ago by Kevin Blighe 89k
0
votes
0
replies
11k
views
Comment: C: Predicting survival of cancer patients using glmnet cox
4.9 years ago by Kevin Blighe 89k
0
votes
1
reply
11k
views
Comment: C: Predicting survival of cancer patients using glmnet cox
4.9 years ago by Kevin Blighe 89k
9,977 results • Page 26 of 200
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