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Comment: C: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
5.5 years ago by Kevin Blighe 90k
4
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Answer: A: Does the expression data from GEO Series Matrix File(s) can directly be used wit
5.5 years ago by Kevin Blighe 90k
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1.7k
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Comment: C: Batch effect in GWAS
5.5 years ago by Kevin Blighe 90k
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6.2k
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Comment: C: VCF-merge fails due to tabix not producing .tbi files
5.5 years ago by Kevin Blighe 90k
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10k
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Comment: C: About TCGA CNV data preprocessing
5.5 years ago by Kevin Blighe 90k
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1
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6.2k
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Comment: C: VCF-merge fails due to tabix not producing .tbi files
5.5 years ago by Kevin Blighe 90k
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877
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Comment: C: Human SNPs databse for download
5.5 years ago by Kevin Blighe 90k
1
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877
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Comment: C: Human SNPs databse for download
5.5 years ago by Kevin Blighe 90k
0
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1
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1.7k
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Comment: C: Batch effect in GWAS
5.5 years ago by Kevin Blighe 90k
4
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3.6k
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Answer: A: allele frequency bcf tools
5.5 years ago by Kevin Blighe 90k
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1.7k
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Answer: A: Bcftools Mpileup bias for alternative alleles?
5.5 years ago by Kevin Blighe 90k
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Answer: A: RNA-Seq data from Firebrowse TCGA
5.5 years ago by Kevin Blighe 90k
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1.5k
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Answer: A: Determination of target genes of DE miRNAs and interpretation of the sequencs?
5.5 years ago by Kevin Blighe 90k
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1
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1.0k
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Answer: A: Distinguishing protein transcript encoded within lincRNA in RNA-seq DE analysis
5.5 years ago by Kevin Blighe 90k
1
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1
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1.9k
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Comment: C: Finding tag SNPs
5.5 years ago by Kevin Blighe 90k
1
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1.7k
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Answer: A: How to add dots to the PCA (in addition to labels)?
5.5 years ago by Kevin Blighe 90k
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5.3k
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Comment: C: RTG vcfeval: number of variants reported by vcfeval is not equal to actual numbe
5.5 years ago by Kevin Blighe 90k
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3.7k
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Answer: A: How to handle data_RNA_Seq_v2_expression_median from TCGA
5.5 years ago by Kevin Blighe 90k
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2
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10k
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Comment: C: About TCGA CNV data preprocessing
5.5 years ago by Kevin Blighe 90k
0
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1
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3.3k
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Answer: A: color gradient for heatmap2
5.5 years ago by Kevin Blighe 90k
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0
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22k
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Comment: C: Exporting Raw counts into .csv file from seurat object
5.5 years ago by Kevin Blighe 90k
2
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3.4k
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Comment: C: Ensembl gene ID meaning of the underscore
5.5 years ago by Kevin Blighe 90k
2
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2
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1.7k
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Answer: A: Limma: how can I maintain molecule names in the matrix?
5.5 years ago by Kevin Blighe 90k
2
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0
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5.9k
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Answer: A: The difference between heatmap.2 and pheatmap
5.5 years ago by Kevin Blighe 90k
3
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5.0k
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Answer: A: heatmap.2 row clustering does not look right
5.5 years ago by Kevin Blighe 90k
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4.6k
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Comment: C: Missing a row name in Heatmap.2
5.5 years ago by Kevin Blighe 90k
2
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1
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6.2k
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Answer: A: VCF-merge fails due to tabix not producing .tbi files
5.5 years ago by Kevin Blighe 90k
0
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1
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1.9k
views
Answer: C: Finding tag SNPs
5.5 years ago by Kevin Blighe 90k
1
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1
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1.3k
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Answer: A: several copy number alterations in the same position in an individual
5.5 years ago by Kevin Blighe 90k
2
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1
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4.3k
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Answer: A: Best Bioinformatics PhD Programs
5.5 years ago by Kevin Blighe 90k
1
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1
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2.6k
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Comment: C: Question on hazard ratio for differential expression and survival in published T
5.5 years ago by Kevin Blighe 90k
0
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0
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1.3k
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Comment: C: ctDNA tumor mutation burden
5.5 years ago by Kevin Blighe 90k
2
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1
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2.6k
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Answer: A: Question on hazard ratio for differential expression and survival in published T
5.5 years ago by Kevin Blighe 90k
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1
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1.7k
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Comment: C: Replace column name in data-frame
5.5 years ago by Kevin Blighe 90k
1
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1
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1.3k
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Answer: A: ctDNA tumor mutation burden
5.5 years ago by Kevin Blighe 90k
2
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3
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4.7k
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Answer: A: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
5.5 years ago by Kevin Blighe 90k
0
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0
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4.7k
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Comment: C: What are good packages to find Differentially Expressed Genes from RNASeq RSEM a
5.5 years ago by Kevin Blighe 90k
1
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1
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2.8k
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Comment: C: How to analyze TCGA data downloaded by TCGA2STAT using TCGAbiolinks package
5.5 years ago by Kevin Blighe 90k
0
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1
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10k
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Comment: C: About TCGA CNV data preprocessing
5.5 years ago by Kevin Blighe 90k
3
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1
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34k
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Comment: C: Adding column annotation to heatmap using Complexheatmap
5.5 years ago by Kevin Blighe 90k
2
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0
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723
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Answer: A: DESeq2 genes which vary between 4 groups
5.5 years ago by Kevin Blighe 90k
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0
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4.3k
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Answer: A: Gene Expression analysis of Clariom D array
5.5 years ago by Kevin Blighe 90k
0
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0
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10k
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Comment: C: EnhancedVolcano: How to coloring custom gene points in volcano plot?
5.5 years ago by Kevin Blighe 90k
0
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0
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6.2k
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Comment: C: RMA with Affymetrix Expression Console vs Oligo package
5.5 years ago by Kevin Blighe 90k
5
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1
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10k
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Answer: A: EnhancedVolcano: How to coloring custom gene points in volcano plot?
5.5 years ago by Kevin Blighe 90k
0
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0
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947
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Answer: A: DESeq2/RNA-Seq: Cross-study comparisons with large control-variance?
5.5 years ago by Kevin Blighe 90k
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0
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3.7k
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Comment: C: Get Expression Table from CEL raw data with R
5.5 years ago by Kevin Blighe 90k
1
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1
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7.6k
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Comment: C: How to get differential gene expression within paired samples using EdgeR or DES
5.5 years ago by Kevin Blighe 90k
0
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0
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2.8k
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Comment: C: Analysis of Illumina HumanHT-12_V4
5.5 years ago by Kevin Blighe 90k
1
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1
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7.6k
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Answer: C: How to get differential gene expression within paired samples using EdgeR or DES
5.5 years ago by Kevin Blighe 90k
10,015 results • Page 50 of 201
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