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2
votes
4
replies
5.9k
views
different ways of downloading SRA metadata
SRA GEO
updated 4 months ago by ★ 2.1k • written 3.4 years ago by ▴ 90
0
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0
replies
1.8k
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Answer: Answer: downlaod snp from UK Biobank imputed snp chr1 ukb22828 file
3.0 years ago by Mathias ▴ 90
0
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1
reply
1.2k
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Comment: Comment: Need help to modify a tcl script inorder to find out true water permations throu
3.1 years ago by Mathias ▴ 90
0
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0
replies
899
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downloading restricted access data from dbGaP/SRA
SRA dbGaP
3.1 years ago by Mathias ▴ 90
0
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0
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952
views
Comment: Comment: checking whether SNP is covered by certain microArray?
3.1 years ago by Mathias ▴ 90
3
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2
replies
952
views
checking whether SNP is covered by certain microArray?
illumina SNP microArray
3.1 years ago by Mathias ▴ 90
0
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0
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1.1k
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Comment: Comment: UK Biobank
3.8 years ago by Mathias ▴ 90
0
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0
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6.9k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.0 years ago by Mathias ▴ 90
0
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1
reply
6.9k
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Comment: Comment: PRS in UK Biobank - no covariate file and no phenotype file
4.1 years ago by Mathias ▴ 90
2
votes
1
reply
2.3k
views
How to avoid annotating multiple genes to a single CpG locus?
biomart r TCGAbiolinks dna annotation
updated 7.3 years ago by ★ 2.1k • written 7.3 years ago by ▴ 90
0
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1
reply
6.3k
views
Comment: C: EPIC array annotation
7.3 years ago by Mathias ▴ 90
2
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0
replies
3.4k
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Answer: A: TCGAbiolinks download error
7.3 years ago by Mathias ▴ 90
1
vote
1
reply
2.3k
views
Is there public (DNA methylation) data on circulating cell-free DNA - why not?
epigenetics circulating cell-free DNA biomarker
updated 7.5 years ago by 89k • written 7.5 years ago by ▴ 90
1
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0
replies
2.9k
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Comment: C: TCGA calling pipeline query
7.5 years ago by Mathias ▴ 90
0
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0
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2.5k
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Answer: A: Differential methylation analysis
7.5 years ago by Mathias ▴ 90
0
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0
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3.7k
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Comment: C: Data Discrepency from TCGA-GDC portal and GDC firehose
7.5 years ago by Mathias ▴ 90
0
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0
replies
5.2k
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Comment: C: TCGABioLinks how to set Sample conditions?
7.6 years ago by Mathias ▴ 90
1
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1
reply
5.2k
views
Comment: C: TCGABioLinks how to set Sample conditions?
7.6 years ago by Mathias ▴ 90
0
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0
replies
3.7k
views
Comment: C: help with GDCprepare
7.6 years ago by Mathias ▴ 90
1
vote
1
reply
5.2k
views
Answer: A: TCGABioLinks how to set Sample conditions?
7.6 years ago by Mathias ▴ 90
1
vote
0
replies
2.8k
views
Comment: C: Transfer of MHC-I, MHC-II epitope prediction to non-model organism (fish)
7.6 years ago by Mathias ▴ 90
1
vote
1
reply
2.8k
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Comment: C: Transfer of MHC-I, MHC-II epitope prediction to non-model organism (fish)
7.6 years ago by Mathias ▴ 90
2
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1
reply
2.8k
views
Comment: C: Transfer of MHC-I, MHC-II epitope prediction to non-model organism (fish)
7.6 years ago by Mathias ▴ 90
0
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0
replies
1.4k
views
Filtering & validation strategies for methylation analysis without normal controls
epigenomics InfiniumPurify methylation
7.6 years ago by Mathias ▴ 90
0
votes
0
replies
2.2k
views
Best way to use champ.impute or impute.knn - neighbor approach?
ChAMP impute R
8.0 years ago by Mathias ▴ 90
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