Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
7.1k
views
Comment: C: How to interpret the outputs generated from bamtobed using BedTools?
10.3 years ago by Sukhi Singh 11k
2
votes
1
reply
7.1k
views
Comment: Comment: How to interpret the outputs generated from bamtobed using BedTools?
updated 2.9 years ago by 45k • written 10.3 years ago by 11k
1
vote
1
reply
7.1k
views
Answer: Answer: How to interpret the outputs generated from bamtobed using BedTools?
updated 2.9 years ago by 45k • written 10.3 years ago by 11k
0
votes
1
reply
11k
views
Answer: A: Visualizing bigwig files in UCSC genome browser
10.4 years ago by Sukhi Singh 11k
2
votes
1
reply
3.5k
views
Comment: Comment: targeted bed file average coverage
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
1
vote
1
reply
4.6k
views
Answer: Answer: Tophat Error "segment-based junction search failed"
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
0
votes
0
replies
2.3k
views
Answer: A: removing/ masking satellite sequences in data
10.4 years ago by Sukhi Singh 11k
0
votes
0
replies
9.1k
views
Comment: C: bam file flags- interpretation
10.4 years ago by Sukhi Singh 11k
1
vote
0
replies
9.1k
views
Comment: Comment: bam file flags- interpretation
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
2
votes
1
reply
6.0k
views
Comment: C: greping unique reads from fastq file
10.4 years ago by Sukhi Singh 11k
0
votes
0
replies
5.4k
views
Comment: C: How to present "N" in gap region of consensus in sequence assembly?
10.4 years ago by Sukhi Singh 11k
2
votes
1
reply
4.3k
views
Comment: C: Correlating ChIP-Seq peaks with isoform level expression
10.4 years ago by Sukhi Singh 11k
2
votes
1
reply
4.3k
views
Comment: Comment: Correlating ChIP-Seq peaks with isoform level expression
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
11
votes
8
replies
4.3k
views
Correlating ChIP-Seq peaks with isoform level expression
RNA-Seq sequencing cufflinks ensembl ChIP-Seq
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
0
votes
0
replies
3.4k
views
Answer: Answer: Getting warning during tblastn
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
3
votes
3
replies
35k
views
Answer: Answer: Can the code of a R package be changed? How?
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
1
vote
1
reply
4.5k
views
Comment: C: merge multpile bam files for unique samples
10.4 years ago by Sukhi Singh 11k
0
votes
1
reply
8.2k
views
Comment: C: How to use cxb files from cuffquant in cuffdiff?
10.4 years ago by Sukhi Singh 11k
0
votes
1
reply
8.2k
views
Comment: C: How to use cxb files from cuffquant in cuffdiff?
10.4 years ago by Sukhi Singh 11k
0
votes
1
reply
3.1k
views
Comment: Comment: Compare consecutive columns of a phased Beagle file to generate the number of el
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
2
votes
1
reply
8.2k
views
Answer: Answer: How to use cxb files from cuffquant in cuffdiff?
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
0
replies
4.3k
views
Comment: Comment: Software for visualizing circular genomes mapping
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
3
votes
1
reply
4.6k
views
Answer: Answer: Updating the Bowtie2 to version 2.2.5
updated 2.9 years ago by 45k • written 10.4 years ago by 11k
2
votes
0
replies
11k
views
Answer: Answer: How to visualize a bam file in UCSC Genome Browser
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
1
reply
4.3k
views
Comment: Comment: Software for visualizing circular genomes mapping
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
0
replies
11k
views
Comment: C: merge chipseq peaks with bedtools/other tool
10.4 years ago by Sukhi Singh 11k
1
vote
0
replies
2.9k
views
Answer: Answer: bowtie reporting reads that did not align
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
6
votes
1
reply
11k
views
Answer: Answer: merge chipseq peaks with bedtools/other tool
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
1
reply
11k
views
Comment: C: merge chipseq peaks with bedtools/other tool
10.4 years ago by Sukhi Singh 11k
0
votes
1
reply
5.6k
views
Comment: Comment: csScatter: Error in match(x, table, nomatch = 0L)
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
1
reply
5.6k
views
Comment: Comment: csScatter: Error in match(x, table, nomatch = 0L)
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
2
replies
11k
views
Comment: Comment: merge chipseq peaks with bedtools/other tool
updated 2.8 years ago by 45k • written 10.4 years ago by 11k
0
votes
0
replies
21k
views
Comment: C: Tophat Error : Oserror: [Errno 2] No Such File Or Directory
10.4 years ago by Sukhi Singh 11k
0
votes
0
replies
4.3k
views
Comment: Comment: Write Diffgenes/Diffgeneids In A Tab File
updated 2.8 years ago by 45k • written 10.5 years ago by 11k
2
votes
0
replies
314k
views
Comment: C: How To Filter Mapped Reads With Samtools
10.5 years ago by Sukhi Singh 11k
0
votes
0
replies
56k
views
Comment: C: How Can I Convert Bam/Sam To Wiggle
10.6 years ago by Sukhi Singh 11k
0
votes
1
reply
4.7k
views
Answer: Answer: Genome annotation by RAST
updated 3.5 years ago by 45k • written 10.7 years ago by 11k
0
votes
0
replies
314k
views
Comment: Comment: How To Filter Mapped Reads With Samtools
updated 3.6 years ago by 45k • written 10.8 years ago by 11k
0
votes
0
replies
13k
views
Comment: C: Adding Custom Bed And Bam Tracks To UCSC Browser By URL
11.0 years ago by Sukhi Singh 11k
9
votes
3
replies
7.2k
views
Forum: The top 100 papers [Nature explores the most-cited research of all time.]
nature blast paper research clustal
updated 4.6 years ago by 45k • written 11.0 years ago by 11k
0
votes
0
replies
3.7k
views
Comment: Comment: Chip-Seq For Mitochondrial Genome
updated 3.8 years ago by 45k • written 11.1 years ago by 11k
0
votes
0
replies
3.7k
views
Comment: C: Chip-Seq For Mitochondrial Genome
11.1 years ago by Sukhi Singh 11k
1
vote
0
replies
13k
views
Comment: C: Binning Over Genes And Calculating The Coverage [Bedops/Bedmap]
11.2 years ago by Sukhi Singh 11k
0
votes
0
replies
9.9k
views
Comment: C: Gene Ontology visualization
11.2 years ago by Sukhi Singh 11k
5
votes
2
replies
4.2k
views
Comment: C: Parsing sam file
11.2 years ago by Sukhi Singh 11k
0
votes
0
replies
2.6k
views
Comment: Comment: LocusZoom used in different species
updated 4.0 years ago by 45k • written 11.3 years ago by 11k
0
votes
1
reply
8.2k
views
Comment: Comment: chip-seq analysis (bowtie2, MACS2)
updated 4.0 years ago by 45k • written 11.3 years ago by 11k
2
votes
1
reply
8.2k
views
Answer: Answer: chip-seq analysis (bowtie2, MACS2)
updated 4.0 years ago by 45k • written 11.3 years ago by 11k
0
votes
1
reply
2.8k
views
Comment: Comment: GEMS error regarding chr19
updated 4.0 years ago by 45k • written 11.3 years ago by 11k
2
votes
0
replies
5.5k
views
Comment: Comment: Different coverage from bedtools and in vcf file - HELP PLEASE
updated 4.0 years ago by 45k • written 11.3 years ago by 11k
744 results • Page 6 of 15
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6