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3
votes
2
replies
2.9k
views
Answer: A: Noisy ChIPSeq data
7.1 years ago by Sukhi Singh 11k
1
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1
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2.1k
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Answer: A: bigwig file in UCSC custom track
7.1 years ago by Sukhi Singh 11k
1
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1
reply
1.6k
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Answer: A: HOMER mergepeaks matrix interpreatation
7.1 years ago by Sukhi Singh 11k
1
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0
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2.2k
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Answer: A: CummeRbund: unable to use getGenes to retrieve short names in R
7.1 years ago by Sukhi Singh 11k
0
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0
replies
2.7k
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Answer: A: Venn diagram for annotation results
7.1 years ago by Sukhi Singh 11k
3
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2
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6.5k
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Answer: A: Conversion from tdf to bed format
7.1 years ago by Sukhi Singh 11k
1
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0
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5.0k
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Answer: A: How to convert the data from .wig file to .table or .csv?
7.1 years ago by Sukhi Singh 11k
0
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0
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1.7k
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Answer: C: question : scattplot with phylogenetic tree x axis
7.1 years ago by Sukhi Singh 11k
4
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0
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1.2k
views
Answer: A: How to remove the last character "," from each row in bed file?
7.1 years ago by Sukhi Singh 11k
2
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1
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1.4k
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Answer: C: Open source libraries for NGS data analysis.
7.1 years ago by Sukhi Singh 11k
7
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1
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2.6k
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Answer: A: How to add a new column with consecutive integer number in a bed file?
7.1 years ago by Sukhi Singh 11k
3
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1
reply
2.1k
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Answer: A: GO enrichment and exclusion of genes without GO terms
7.1 years ago by Sukhi Singh 11k
0
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1
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9.1k
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Answer: A: bwa mem seq and Segmentation fault (core dumped)
7.1 years ago by Sukhi Singh 11k
0
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0
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2.3k
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Answer: A: Annotation, Over representation testing and Pathway analysis using Ensembl gene
7.2 years ago by Sukhi Singh 11k
3
votes
1
reply
2.1k
views
Answer: A: how to calculate the frequency of each overlapping nucleotides?
7.2 years ago by Sukhi Singh 11k
1
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1
reply
2.2k
views
Answer: C: How to write a i in loop for readfastq function
7.2 years ago by Sukhi Singh 11k
2
votes
2
replies
6.3k
views
Answer: A: How to align 100 samples with BWA?
7.2 years ago by Sukhi Singh 11k
2
votes
0
replies
7.2k
views
Answer: A: SRA toolkit not installed
7.2 years ago by Sukhi Singh 11k
3
votes
1
reply
10k
views
Answer: A: overlapping texts (plot.PCA in FactoMineR)
7.2 years ago by Sukhi Singh 11k
1
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1
reply
2.2k
views
Answer: A: Error with bedtools intersect
7.2 years ago by Sukhi Singh 11k
2
votes
0
replies
1.6k
views
Answer: C: chromosomal cordinates of a list of genes
7.2 years ago by Sukhi Singh 11k
3
votes
1
reply
1.7k
views
Answer: A: Donation of Old / Refurbished Computer Servers
7.2 years ago by Sukhi Singh 11k
5
votes
0
replies
1.8k
views
Answer: A: awk filed with different separator
7.2 years ago by Sukhi Singh 11k
0
votes
1
reply
2.7k
views
Answer: A: How to normalize data for heat
7.3 years ago by Sukhi Singh 11k
2
votes
0
replies
1.9k
views
Answer: Answer: Annotating genes with a function
updated 10 months ago by 39k • written 7.3 years ago by 11k
1
vote
1
reply
6.2k
views
Answer: A: How to blast against published transcriptome data
7.3 years ago by Sukhi Singh 11k
3
votes
0
replies
1.6k
views
Answer: Answer: Program/Tool that can determine whether two profiles are likely to be from the s
updated 10 months ago by 39k • written 7.3 years ago by 11k
1
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0
replies
2.3k
views
Answer: A: options in fastq-dump
7.3 years ago by Sukhi Singh 11k
1
vote
1
reply
5.9k
views
Answer: A: Empty output from MACS2 when using control
7.3 years ago by Sukhi Singh 11k
1
vote
0
replies
3.7k
views
Answer: A: Data Download using TCGAbiolinks from TCGA database
7.3 years ago by Sukhi Singh 11k
1
vote
1
reply
4.0k
views
Answer: Answer: How to download gc5Base file for hg38?
updated 7 months ago by 39k • written 7.8 years ago by 11k
0
votes
0
replies
1.8k
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Answer: Answer: ChIPQC showed errors 'nnodes' must be >= 1
updated 7 months ago by 39k • written 7.8 years ago by 11k
1
vote
0
replies
1.7k
views
Answer: Answer: Function in R/File: the most expressed genes.
updated 7 months ago by 39k • written 7.8 years ago by 11k
2
votes
0
replies
3.7k
views
Answer: Answer: GO Term enrichment prokaryotes
updated 7 months ago by 39k • written 7.8 years ago by 11k
0
votes
0
replies
2.7k
views
Answer: Answer: querying 5'UTR, first exon, and flanking sequences
updated 7 months ago by 39k • written 7.8 years ago by 11k
3
votes
1
reply
3.0k
views
Answer: Answer: Determining Transcription Start Sites from multiple RNAseq bioreps
updated 7 months ago by 39k • written 7.8 years ago by 11k
1
vote
0
replies
3.5k
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Answer: A: Turning GO Terms to GO IDs
7.8 years ago by Sukhi Singh 11k
0
votes
1
reply
3.1k
views
Answer: Answer: HOMER tool's HiC interactions
updated 7 months ago by 39k • written 7.8 years ago by 11k
3
votes
1
reply
2.6k
views
Answer: Answer: Functional enrichment in differentially expressed genes from RNA-seq
updated 7 months ago by 39k • written 7.8 years ago by 11k
1
vote
1
reply
5.4k
views
Answer: Answer: How to interpret the outputs generated from bamtobed using BedTools?
updated 6 months ago by 39k • written 7.9 years ago by 11k
0
votes
1
reply
9.0k
views
Answer: A: Visualizing bigwig files in UCSC genome browser
7.9 years ago by Sukhi Singh 11k
1
vote
1
reply
3.9k
views
Answer: Answer: Tophat Error "segment-based junction search failed"
updated 5 months ago by 39k • written 8.0 years ago by 11k
0
votes
0
replies
1.7k
views
Answer: A: removing/ masking satellite sequences in data
8.0 years ago by Sukhi Singh 11k
0
votes
0
replies
2.7k
views
Answer: Answer: Getting warning during tblastn
updated 5 months ago by 39k • written 8.0 years ago by 11k
3
votes
3
replies
33k
views
Answer: Answer: Can the code of a R package be changed? How?
updated 5 months ago by 39k • written 8.0 years ago by 11k
2
votes
1
reply
6.9k
views
Answer: Answer: How to use cxb files from cuffquant in cuffdiff?
updated 4 months ago by 39k • written 8.0 years ago by 11k
3
votes
1
reply
3.4k
views
Answer: Answer: Updating the Bowtie2 to version 2.2.5
updated 6 months ago by 39k • written 8.0 years ago by 11k
2
votes
0
replies
9.5k
views
Answer: Answer: How to visualize a bam file in UCSC Genome Browser
updated 4 months ago by 39k • written 8.0 years ago by 11k
1
vote
0
replies
2.3k
views
Answer: Answer: bowtie reporting reads that did not align
updated 4 months ago by 39k • written 8.0 years ago by 11k
6
votes
1
reply
8.0k
views
Answer: Answer: merge chipseq peaks with bedtools/other tool
updated 4 months ago by 39k • written 8.0 years ago by 11k
246 results • Page 2 of 5
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