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Comment:
Comment: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
24 months ago by
harelarik
▴ 90
0
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0
replies
2.4k
views
Comment:
Comment: Study Modules significance (or Modules Preservation) in ONE network
3.1 years ago by
harelarik
▴ 90
0
votes
0
replies
12k
views
Answer:
Answer: Blastall gives several hits to the same subject sequence
updated 2.9 years ago by
Ram
44k • written 4.0 years ago by
harelarik
▴ 90
0
votes
0
replies
4.4k
views
Comment:
C: Can one plot % of variance using the plotMDS function?
4.5 years ago by
harelarik
▴ 90
0
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0
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7.3k
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Comment:
C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
4.5 years ago by
harelarik
▴ 90
0
votes
1
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7.3k
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Comment:
C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
4.5 years ago by
harelarik
▴ 90
0
votes
0
replies
4.4k
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Comment:
C: Can one plot % of variance using the plotMDS function?
4.5 years ago by
harelarik
▴ 90
1
vote
1
reply
4.4k
views
Comment:
C: Can one plot % of variance using the plotMDS function?
4.5 years ago by
harelarik
▴ 90
5
votes
9
replies
4.4k
views
Can one plot % of variance using the plotMDS function?
limma
plotMDS
PCA
PCoA
% of varience
updated 9 months ago by
Gordon Smyth
★ 7.7k • written 4.5 years ago by
harelarik
▴ 90
0
votes
1
reply
7.3k
views
Comment:
C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
4.5 years ago by
harelarik
▴ 90
3
votes
9
replies
7.3k
views
Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (Principal Coordinate Analysis)?
limma
PCA
plotMDS
RNA-Seq
R
updated 4.5 years ago by
Gordon Smyth
★ 7.7k • written 4.5 years ago by
harelarik
▴ 90
0
votes
0
replies
4.4k
views
Comment:
C: Can one plot % of variance using the plotMDS function?
4.5 years ago by
harelarik
▴ 90
0
votes
1
reply
7.3k
views
Comment:
C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
4.5 years ago by
harelarik
▴ 90
0
votes
0
replies
1000
views
Answer:
A: Multiple protein ids issue- which protein IDs should be selected for downstream
4.5 years ago by
harelarik
▴ 90
0
votes
1
reply
5.0k
views
Comment:
C: What is the minimal recommended cutoff for fold change for such variable samples
4.8 years ago by
harelarik
▴ 90
11
votes
3
replies
5.0k
views
What is the minimal recommended cutoff for fold change for such variable samples?
Proteomics
Cutoff
updated 4.8 years ago by
i.sudbery
20k • written 4.8 years ago by
harelarik
▴ 90
0
votes
1
reply
1000
views
Multiple protein ids issue- which protein IDs should be selected for downstream analysis?
Proteomics
enrichment
persus
4.8 years ago by
harelarik
▴ 90
0
votes
1
reply
2.4k
views
Answer:
A: Study Modules significance (or Modules Preservation) in ONE network
4.8 years ago by
harelarik
▴ 90
0
votes
6
replies
2.4k
views
Study Modules significance (or Modules Preservation) in ONE network
WGCNA
modulePreservation
modules significance
3.1 years ago by
harelarik
▴ 90
0
votes
0
replies
4.3k
views
Answer:
A: How to extract the voom normalized value for each observation?
6.7 years ago by
harelarik
▴ 90
0
votes
1
reply
4.3k
views
How to extract the voom normalized value for each observation?
outputvoomwithqualityweights
6.7 years ago by
harelarik
▴ 90
0
votes
1
reply
4.6k
views
Comment:
C: Limma time-course: how to apply differential contrast if time zero is considered
7.0 years ago by
harelarik
▴ 90
4
votes
8
replies
4.6k
views
Limma time-course: how to apply differential contrast if time zero is considered both as treatment and control?
time-course
limma
updated 18 months ago by
Ram
44k • written 7.0 years ago by
harelarik
▴ 90
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