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Comment: Comment: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover,
16 months ago by harelarik ▴ 90
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Comment: Comment: Study Modules significance (or Modules Preservation) in ONE network
2.5 years ago by harelarik ▴ 90
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Answer: Answer: Blastall gives several hits to the same subject sequence
updated 2.3 years ago by 43k • written 3.3 years ago by ▴ 90
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Comment: C: Can one plot % of variance using the plotMDS function?
3.9 years ago by harelarik ▴ 90
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Comment: C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
3.9 years ago by harelarik ▴ 90
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Comment: C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
3.9 years ago by harelarik ▴ 90
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Comment: C: Can one plot % of variance using the plotMDS function?
3.9 years ago by harelarik ▴ 90
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3.8k
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Comment: C: Can one plot % of variance using the plotMDS function?
3.9 years ago by harelarik ▴ 90
5
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9
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3.8k
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Can one plot % of variance using the plotMDS function?
limma plotMDS PCA PCoA % of varience
updated 6 weeks ago by ★ 7.0k • written 3.9 years ago by ▴ 90
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6.3k
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Comment: C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
3.9 years ago by harelarik ▴ 90
3
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9
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6.3k
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Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (Principal Coordinate Analysis)?
limma PCA plotMDS RNA-Seq R
updated 3.9 years ago by ★ 7.0k • written 3.9 years ago by ▴ 90
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Comment: C: Can one plot % of variance using the plotMDS function?
3.9 years ago by harelarik ▴ 90
0
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1
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6.3k
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Comment: C: Is plotMDS (from limma package) a PCA (Principal Component Analysis) or a PCoA (
3.9 years ago by harelarik ▴ 90
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896
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Answer: A: Multiple protein ids issue- which protein IDs should be selected for downstream
3.9 years ago by harelarik ▴ 90
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4.1k
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Comment: C: What is the minimal recommended cutoff for fold change for such variable samples
4.1 years ago by harelarik ▴ 90
11
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3
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4.1k
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What is the minimal recommended cutoff for fold change for such variable samples?
Proteomics Cutoff
updated 4.1 years ago by 19k • written 4.1 years ago by ▴ 90
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896
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Multiple protein ids issue- which protein IDs should be selected for downstream analysis?
Proteomics enrichment persus
4.1 years ago by harelarik ▴ 90
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2.2k
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Answer: A: Study Modules significance (or Modules Preservation) in ONE network
4.1 years ago by harelarik ▴ 90
0
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6
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2.2k
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Study Modules significance (or Modules Preservation) in ONE network
WGCNA modulePreservation modules significance
2.5 years ago by harelarik ▴ 90
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4.1k
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Answer: A: How to extract the voom normalized value for each observation?
6.0 years ago by harelarik ▴ 90
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1
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4.1k
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How to extract the voom normalized value for each observation?
outputvoomwithqualityweights
6.0 years ago by harelarik ▴ 90
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1
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4.2k
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Comment: C: Limma time-course: how to apply differential contrast if time zero is considered
6.4 years ago by harelarik ▴ 90
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8
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4.2k
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Limma time-course: how to apply differential contrast if time zero is considered both as treatment and control?
time-course limma
updated 10 months ago by 43k • written 6.4 years ago by ▴ 90
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