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Comment: C: Color code samples
5.2 years ago by swbarnes2 15k
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5.7k
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Comment: C: Filtering low quality score bases from BAM file
5.2 years ago by swbarnes2 15k
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17k
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Comment: C: How to read a dataframe into Seurat for AddMetaData properly?
5.2 years ago by swbarnes2 15k
2
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1
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17k
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Answer: A: How to read a dataframe into Seurat for AddMetaData properly?
5.2 years ago by swbarnes2 15k
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3.4k
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Comment: C: How to do DESeq2 for Kallisto
5.2 years ago by swbarnes2 15k
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3.4k
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Comment: C: How to do DESeq2 for Kallisto
5.2 years ago by swbarnes2 15k
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1
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4.0k
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Comment: C: RPKM and TPM when operating with small group of genes: is there a bias?
5.2 years ago by swbarnes2 15k
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1.2k
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Answer: A: Aligned read loss after SAM to BAM conversion?
5.2 years ago by swbarnes2 15k
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2.3k
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Comment: A: Variant Call Format (.vcf) conversion to .bam
5.2 years ago by swbarnes2 15k
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6.0k
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Answer: A: RNA-SEQ where only a subset of genes is of interest
5.2 years ago by swbarnes2 15k
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1
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1.8k
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Comment: C: get last exon form GTF
5.2 years ago by swbarnes2 15k
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1.9k
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Comment: C: Variant Calling scRNA-seq data for KRAS mutations
5.2 years ago by swbarnes2 15k
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2.6k
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Answer: A: Warnings in the Hisat2 alignment output files
5.2 years ago by swbarnes2 15k
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1
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1.9k
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Comment: C: Variant Calling scRNA-seq data for KRAS mutations
5.2 years ago by swbarnes2 15k
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1
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44k
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Comment: C: How to embed known cell information into Seurat object? AddMetaData?
5.2 years ago by swbarnes2 15k
4
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1.8k
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Answer: A: Differential expression analysis with DESeq2
5.2 years ago by swbarnes2 15k
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1.7k
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Comment: C: Principle component analysis PCA
5.2 years ago by swbarnes2 15k
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1
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2.4k
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Comment: C: Ambiguous results of RNA-Seq data using stringtie with edgeR
5.2 years ago by swbarnes2 15k
2
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2.4k
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Answer: A: Ambiguous results of RNA-Seq data using stringtie with edgeR
5.2 years ago by swbarnes2 15k
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4
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44k
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Answer: A: How to embed known cell information into Seurat object? AddMetaData?
5.2 years ago by swbarnes2 15k
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1.9k
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Comment: C: How to analyse Sanger sequence data?
5.2 years ago by swbarnes2 15k
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1.2k
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Answer: A: Analyzing multiple RNA-seq datasets
5.2 years ago by swbarnes2 15k
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1
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1.2k
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Answer: A: What are common errors in RNA-Seq analysis that skew results?
5.2 years ago by swbarnes2 15k
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1.9k
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Answer: A: Barplot of genes deferentially expressed in a few clusters
5.2 years ago by swbarnes2 15k
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1
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1.9k
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Answer: A: How to analyse Sanger sequence data?
5.2 years ago by swbarnes2 15k
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2.4k
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Comment: C: R featureCounts throws error over SAF format
5.2 years ago by swbarnes2 15k
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2
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5.3k
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Comment: C: How can I align single RNA seq(scRNAseq) data by using STAR or another aligner?
5.2 years ago by swbarnes2 15k
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2.0k
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Answer: A: Understanding VCF : 0/0 v 0/1 v 1/0 v 1/1 etc
5.2 years ago by swbarnes2 15k
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0
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2.6k
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Answer: A: Why sequence length disturbution failed after adapter trimming: fastqc?
5.2 years ago by swbarnes2 15k
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1
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4.2k
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Comment: C: contigs of spades
5.2 years ago by swbarnes2 15k
2
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4.2k
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Answer: A: contigs of spades
5.2 years ago by swbarnes2 15k
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2.2k
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Answer: A: Detecting Outliers by looking at PCA
5.2 years ago by swbarnes2 15k
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6.6k
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Answer: A: Installing "Sleuth" in R
5.2 years ago by swbarnes2 15k
2
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1
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1.8k
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Answer: A: PCA separation of drugs from an RNA seq experiment.
5.2 years ago by swbarnes2 15k
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1
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5.1k
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Comment: C: Center and scale RIN values for DESeq2?
5.2 years ago by swbarnes2 15k
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1
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5.1k
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Comment: C: Center and scale RIN values for DESeq2?
5.2 years ago by swbarnes2 15k
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1
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5.1k
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Comment: C: Center and scale RIN values for DESeq2?
5.2 years ago by swbarnes2 15k
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1
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5.1k
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Comment: C: Center and scale RIN values for DESeq2?
5.2 years ago by swbarnes2 15k
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5.1k
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Comment: C: Center and scale RIN values for DESeq2?
5.2 years ago by swbarnes2 15k
1
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1
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5.1k
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Comment: C: Center and scale RIN values for DESeq2?
5.2 years ago by swbarnes2 15k
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0
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3.5k
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Answer: A: Samtools Parse error at line 1
5.2 years ago by swbarnes2 15k
0
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1
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2.8k
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Comment: C: STAR parameters in OmicsBox
5.2 years ago by swbarnes2 15k
1
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1
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11k
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Comment: C: Single cell DEG analysis. Wildly different results from different FindMarkers te
5.2 years ago by swbarnes2 15k
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2.5k
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Comment: C: multi-factor Deseq LRT test analysis
5.2 years ago by swbarnes2 15k
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1
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2.8k
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Answer: A: STAR parameters in OmicsBox
5.2 years ago by swbarnes2 15k
1
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2.7k
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Answer: A: Cellranger: BCR analysis
5.2 years ago by swbarnes2 15k
2
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1
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2.7k
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Comment: A: Does bai file contain chromosome names and their lengths?
5.2 years ago by swbarnes2 15k
1
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1
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5.2k
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Comment: C: how to get one vcf file for freebayes from many bam files
5.2 years ago by swbarnes2 15k
1
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1
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5.2k
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Answer: A: how to get one vcf file for freebayes from many bam files
5.2 years ago by swbarnes2 15k
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0
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3.3k
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Comment: C: BWA aligning forward and reverse differently
5.2 years ago by swbarnes2 15k
2,124 results • Page 21 of 43
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