Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
0
replies
1.6k
views
Answer: A: Different NGS runs for paired samples
5.6 years ago by swbarnes2 15k
1
vote
0
replies
1.8k
views
Comment: C: How to add annotation for differentially expressed genes obtained using DESeq2
5.6 years ago by swbarnes2 15k
0
votes
1
reply
1.8k
views
Comment: C: How to add annotation for differentially expressed genes obtained using DESeq2
5.6 years ago by swbarnes2 15k
0
votes
0
replies
1.4k
views
Answer: A: Integrated analysis of TKI-treated and untreated PBMCs - gene expression & vdj l
5.6 years ago by swbarnes2 15k
0
votes
0
replies
2.9k
views
Answer: A: Run Cellranger Count with Novogene fastq files
5.6 years ago by swbarnes2 15k
0
votes
0
replies
4.5k
views
Answer: A: CellRanger scRNA .mtx only uses 15% of reads in .bam?
5.6 years ago by swbarnes2 15k
0
votes
1
reply
4.5k
views
Comment: C: CellRanger scRNA .mtx only uses 15% of reads in .bam?
5.6 years ago by swbarnes2 15k
0
votes
1
reply
2.6k
views
Answer: A: there is an error after samtools index
5.6 years ago by swbarnes2 15k
0
votes
1
reply
3.5k
views
Answer: A: How to cat fastq files but keep different samples separate
5.6 years ago by swbarnes2 15k
2
votes
1
reply
7.1k
views
Answer: A: BWA-MEM read groups usage
5.7 years ago by swbarnes2 15k
0
votes
1
reply
885
views
Answer: A: Explaining relation of WGS and transcriptome
5.7 years ago by swbarnes2 15k
1
vote
0
replies
2.0k
views
Answer: A: Unbiased clustering from bulk tissue RNA-seq?
5.7 years ago by swbarnes2 15k
0
votes
1
reply
1.1k
views
Comment: C: Human DNA - Sequenced by Multiple Labs
5.7 years ago by swbarnes2 15k
0
votes
1
reply
1.1k
views
Comment: C: searching for specific RNA nucleotide sequences
5.7 years ago by swbarnes2 15k
1
vote
0
replies
5.3k
views
Answer: A: STAR error: EXITING because of FATAL ERROR in reads input: short read sequence l
5.7 years ago by swbarnes2 15k
3
votes
1
reply
11k
views
Answer: C: Illumina index adapter trimming of FASTQ files using Cutadapt/TrimGalore
5.7 years ago by swbarnes2 15k
0
votes
0
replies
12k
views
Comment: C: How to split fastq file containing Forward and Reverse reads to two files Forwar
5.7 years ago by swbarnes2 15k
0
votes
1
reply
12k
views
Comment: C: How to split fastq file containing Forward and Reverse reads to two files Forwar
5.7 years ago by swbarnes2 15k
0
votes
0
replies
769
views
Answer: A: Can I add the read counts to the re-sequenced read counts directly?
5.7 years ago by swbarnes2 15k
1
vote
1
reply
3.0k
views
Comment: C: Salmon annotation of transcripts in quasi-mapping step
5.7 years ago by swbarnes2 15k
0
votes
1
reply
1.4k
views
Comment: C: How to make some modifications to reference genome?
5.7 years ago by swbarnes2 15k
0
votes
1
reply
1.9k
views
Answer: A: Compute Mapping quality for invariant sites
5.7 years ago by swbarnes2 15k
0
votes
1
reply
2.9k
views
Comment: C: something strange when use UMI-tools dedup&count after STAR alignment
5.7 years ago by swbarnes2 15k
0
votes
1
reply
2.9k
views
Comment: C: something strange when use UMI-tools dedup&count after STAR alignment
5.7 years ago by swbarnes2 15k
0
votes
2
replies
2.1k
views
Answer: A: Strange coverage of mtDNA - need help interpreting MiSeq results
5.7 years ago by swbarnes2 15k
0
votes
0
replies
2.4k
views
Answer: A: combining reads from multiple lanes for DE analysis
5.7 years ago by swbarnes2 15k
0
votes
0
replies
5.0k
views
Comment: C: How to get different outputs for kallisto on multiple samples?
5.7 years ago by swbarnes2 15k
0
votes
2
replies
12k
views
Answer: A: How to normalize gene expression with CPM
5.7 years ago by swbarnes2 15k
0
votes
1
reply
5.0k
views
Answer: A: How to get different outputs for kallisto on multiple samples?
5.7 years ago by swbarnes2 15k
0
votes
0
replies
1.7k
views
Answer: A: Replacing BAM reference
5.7 years ago by swbarnes2 15k
2
votes
0
replies
1.7k
views
Comment: C: Replacing BAM reference
5.7 years ago by swbarnes2 15k
1
vote
0
replies
1.9k
views
Comment: C: Pros and cons to do biomedical research in pharmaceutical company
5.8 years ago by swbarnes2 15k
1
vote
0
replies
1.6k
views
Answer: A: Excel: using quartiles & averageifs to combine probe values without outliers
5.8 years ago by swbarnes2 15k
0
votes
1
reply
2.3k
views
Comment: C: Are there any issues with using sample reads coming from different technologies
5.8 years ago by swbarnes2 15k
0
votes
0
replies
1.8k
views
Answer: A: HISAT2 on multiple samples
5.8 years ago by swbarnes2 15k
1
vote
1
reply
2.8k
views
Answer: A: umi_tools count omitting majority of reads
5.8 years ago by swbarnes2 15k
0
votes
0
replies
1.2k
views
Answer: A: about the batch effects
5.8 years ago by swbarnes2 15k
1
vote
0
replies
1.7k
views
Answer: A: Extract subsequences from a fastA file with specific start sequence and length i
5.8 years ago by swbarnes2 15k
1
vote
1
reply
3.0k
views
Comment: C: How to analyze this kind format of 10x single cell RNA-seq data?
5.8 years ago by swbarnes2 15k
0
votes
1
reply
3.0k
views
Comment: C: How to analyze this kind format of 10x single cell RNA-seq data?
5.8 years ago by swbarnes2 15k
2
votes
1
reply
3.0k
views
Comment: C: How to analyze this kind format of 10x single cell RNA-seq data?
5.8 years ago by swbarnes2 15k
1
vote
1
reply
1.4k
views
Answer: A: Complex DESeq2 Model with different gene dosages
5.8 years ago by swbarnes2 15k
1
vote
0
replies
4.9k
views
Answer: A: best way to combine RNAseq data from different sequencing batches
5.8 years ago by swbarnes2 15k
0
votes
0
replies
1.8k
views
Answer: A: Is it Possible to Filter a sc-RNA-Seq FASTQ based Upon Known Cell Barcodes?
5.8 years ago by swbarnes2 15k
0
votes
0
replies
3.0k
views
Comment: C: configure of bcl2fastq
5.8 years ago by swbarnes2 15k
1
vote
1
reply
1.7k
views
Comment: C: design matrix dseq2
5.8 years ago by swbarnes2 15k
0
votes
1
reply
3.0k
views
Comment: C: configure of bcl2fastq
5.8 years ago by swbarnes2 15k
0
votes
1
reply
1.7k
views
Answer: A: design matrix dseq2
5.8 years ago by swbarnes2 15k
0
votes
0
replies
4.6k
views
Comment: C: What do I need to do in order to use multiple different reference genomes when a
5.8 years ago by swbarnes2 15k
2
votes
1
reply
4.6k
views
Answer: A: What do I need to do in order to use multiple different reference genomes when a
5.8 years ago by swbarnes2 15k
2,124 results • Page 25 of 43
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6