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Answer: Answer: Why a gene with amplification in copy number shows downregulation in transcripto
20 months ago by Shred ★ 1.4k
3
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1
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1.2k
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Comment: Comment: Variant identified, What next?
20 months ago by Shred ★ 1.4k
2
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0
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739
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Answer: Answer: How to create a fasta file using a list of DNA sequences data
20 months ago by Shred ★ 1.4k
1
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1
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963
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Comment: Comment: Reading in input file into a Snakemake pipeline
20 months ago by Shred ★ 1.4k
3
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1
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963
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Answer: Answer: Reading in input file into a Snakemake pipeline
21 months ago by Shred ★ 1.4k
0
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0
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1.3k
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Comment: Comment: Cannot call haplotypes on bam
21 months ago by Shred ★ 1.4k
2
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1
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734
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Comment: Comment: Feature selection for a binary classifier using mixed cancer type samples
21 months ago by Shred ★ 1.4k
0
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1
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1.3k
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Comment: Comment: Cannot call haplotypes on bam
21 months ago by Shred ★ 1.4k
0
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1
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1.3k
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Comment: Comment: Cannot call haplotypes on bam
21 months ago by Shred ★ 1.4k
1
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1
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947
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Comment: Comment: is there any pipeline or best practices of detecting germline neoantigen?
21 months ago by Shred ★ 1.4k
1
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2
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947
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Answer: Answer: is there any pipeline or best practices of detecting germline neoantigen?
21 months ago by Shred ★ 1.4k
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1
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1.0k
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Comment: Comment: Increased GC content after trimming RNAseq data
21 months ago by Shred ★ 1.4k
3
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0
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797
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Answer: Answer: Figuring out if a gene exists in a genome
21 months ago by Shred ★ 1.4k
2
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1
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816
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Answer: Answer: Python pandas transforming int to float in gff subsetting
21 months ago by Shred ★ 1.4k
0
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0
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1.0k
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Answer: Answer: How to count the number of multimapped reads from a bam file?
22 months ago by Shred ★ 1.4k
0
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0
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460
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Comment: Comment: Wildcards Snakemake using bedtools
22 months ago by Shred ★ 1.4k
1
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1
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1.5k
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Comment: Comment: Running salmon in alignment mode?
23 months ago by Shred ★ 1.4k
0
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1
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737
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Comment: Comment: How to make predictions on genes not involved in a particular disease
23 months ago by Shred ★ 1.4k
0
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0
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735
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Comment: Comment: Which statistical test should be used for comparison of a single gene expression
23 months ago by Shred ★ 1.4k
0
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0
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1.3k
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Answer: Answer: How to extract passed SNVs from a VCF file using bcftools?
23 months ago by Shred ★ 1.4k
0
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0
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764
views
Comment: Comment: WGCNA functions not found
23 months ago by Shred ★ 1.4k
1
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1
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1.5k
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Comment: Comment: For loop in R
23 months ago by Shred ★ 1.4k
0
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0
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850
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Comment: Comment: Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
23 months ago by Shred ★ 1.4k
0
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1
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850
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Answer: Answer: Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
23 months ago by Shred ★ 1.4k
2
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1
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1.6k
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Answer: Answer: snakemake workflow
23 months ago by Shred ★ 1.4k
2
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0
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642
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Answer: Answer: Get GO terms for list of NCBI genes from Gene Ontology API using Python
24 months ago by Shred ★ 1.4k
0
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0
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1.3k
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Comment: Comment: Best transcriptome assembler
2.1 years ago by Shred ★ 1.4k
1
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1
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1.3k
views
Answer: Answer: Best transcriptome assembler
2.1 years ago by Shred ★ 1.4k
0
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1
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1.3k
views
Comment: Comment: Best transcriptome assembler
2.1 years ago by Shred ★ 1.4k
1
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0
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3.0k
views
Comment: Comment: Can I convert HTSeq count into RPKM or TPM value or standard unit of RNA-Seq
2.1 years ago by Shred ★ 1.4k
1
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1
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2.5k
views
Comment: Comment: How to get specific information from a list of PDB ID and save all in a spreadsh
2.1 years ago by Shred ★ 1.4k
1
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1
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843
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Comment: Comment: lncRNA analysis
2.1 years ago by Shred ★ 1.4k
0
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0
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554
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Comment: Comment: why Mutect2 calls some germline variants as somatic ones?
2.2 years ago by Shred ★ 1.4k
0
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0
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680
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Comment: Comment: 3' mRNAseq Bioinformatic Considerations (bulk RNAseq)
2.2 years ago by Shred ★ 1.4k
1
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0
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911
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Answer: Answer: How to change gene coordinate in gtf file?
2.2 years ago by Shred ★ 1.4k
1
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0
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707
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Answer: Answer: Is there a tool available to check a Tm for a DNA fragment or sequence?
2.2 years ago by Shred ★ 1.4k
0
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0
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2.0k
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Comment: Comment: featureCounts parameters
2.2 years ago by Shred ★ 1.4k
0
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0
replies
2.0k
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Comment: Comment: featureCounts parameters
2.2 years ago by Shred ★ 1.4k
1
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0
replies
3.7k
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Comment: Comment: Install required dependencies for GATK4 on remote server without root privilege
2.2 years ago by Shred ★ 1.4k
0
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1
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2.0k
views
Comment: Comment: featureCounts parameters
2.2 years ago by Shred ★ 1.4k
0
votes
2
replies
2.0k
views
Comment: Comment: featureCounts parameters
2.2 years ago by Shred ★ 1.4k
0
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1
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1.3k
views
Comment: Comment: How can I bring similar columns from two different tables side by side?
2.2 years ago by Shred ★ 1.4k
0
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0
replies
1.8k
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Answer: Answer: Help with writing a loop for metaspades assembler (beginner)
2.2 years ago by Shred ★ 1.4k
1
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1
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4.2k
views
Comment: Comment: Snakemake 'Unexpected keyword ref in rule definition'
2.2 years ago by Shred ★ 1.4k
1
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1
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4.2k
views
Comment: Comment: Snakemake 'Unexpected keyword ref in rule definition'
2.2 years ago by Shred ★ 1.4k
1
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0
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4.2k
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Answer: Answer: Snakemake 'Unexpected keyword ref in rule definition'
2.2 years ago by Shred ★ 1.4k
0
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0
replies
1.6k
views
Answer: Answer: Converting A Long List of Ensembl IDs to Gene Symbols
2.2 years ago by Shred ★ 1.4k
1
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1
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571
views
Answer: Answer: Extracting the mapped sequence of a certian gene
2.2 years ago by Shred ★ 1.4k
0
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0
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905
views
Comment: Comment: Gene Enrichment
2.3 years ago by Shred ★ 1.4k
0
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0
replies
905
views
Answer: Answer: Gene Enrichment
2.3 years ago by Shred ★ 1.4k
242 results • Page 3 of 5
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