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Comment: Comment: RNA-seq anlaysis > coding region vs. non coding region
6 weeks ago by Shred ★ 1.5k
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417
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Answer: Answer: RNA-seq anlaysis > coding region vs. non coding region
updated 6 weeks ago by 44k • written 6 weeks ago by ★ 1.5k
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440
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Answer: Answer: input for gatk VariantAnnotator --dbsnp
8 weeks ago by Shred ★ 1.5k
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362
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Answer: Answer: RNA-seq, TMM and rRNA counts. Should rRNA genes be removed prior to DE analysis?
9 weeks ago by Shred ★ 1.5k
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221
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Comment: Comment: VCF file GL field confusion
10 weeks ago by Shred ★ 1.5k
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296
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Comment: Comment: dbSNP download and merge to my data
3 months ago by Shred ★ 1.5k
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2.8k
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Comment: Comment: Python script to query GeneCards to get EntrezID, symbol from Ensembl geneID
3 months ago by Shred ★ 1.5k
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7
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2.8k
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Tool: Python script to query GeneCards to get EntrezID, symbol from Ensembl geneID
Ensembl biomart annotation
3 months ago by Shred ★ 1.5k
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1
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351
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Answer: Answer: Help with Base quality Score Recalibration (BQSR) using GATK
4 months ago by Shred ★ 1.5k
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0
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556
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Comment: Comment: Pearson correlation between Gene and clinical parameters
5 months ago by Shred ★ 1.5k
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0
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556
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Comment: Comment: Pearson correlation between Gene and clinical parameters
5 months ago by Shred ★ 1.5k
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1
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556
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Answer: Answer: Pearson correlation between Gene and clinical parameters
5 months ago by Shred ★ 1.5k
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339
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Comment: Comment: seaborn dispersion graph
6 months ago by Shred ★ 1.5k
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0
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424
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Comment: Comment: How to show that correlation from one method is more significant than other meth
7 months ago by Shred ★ 1.5k
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1
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424
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Comment: Comment: How to show that correlation from one method is more significant than other meth
7 months ago by Shred ★ 1.5k
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1
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463
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Comment: Comment: Snakemake paralellize
7 months ago by Shred ★ 1.5k
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636
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Comment: Comment: How to find SNP locations in assemblies other than hg38
7 months ago by Shred ★ 1.5k
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338
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Answer: Answer: Searching for a specific somatic mutation in Illumina data
8 months ago by Shred ★ 1.5k
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0
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367
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Answer: Answer: Statistical analysisi in DESeq2 with different condition
8 months ago by Shred ★ 1.5k
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0
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666
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Comment: Comment: RNA-seq deconvolution algorithm that takes into account weight of marker gene
8 months ago by Shred ★ 1.5k
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666
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Comment: Comment: RNA-seq deconvolution algorithm that takes into account weight of marker gene
8 months ago by Shred ★ 1.5k
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1
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666
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Answer: Answer: RNA-seq deconvolution algorithm that takes into account weight of marker gene
8 months ago by Shred ★ 1.5k
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1
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599
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Comment: Comment: How to identify regions of similarity/identity that are exclusive for a group wi
9 months ago by Shred ★ 1.5k
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1
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684
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Comment: Comment: GO, KEGG, GSEA analysis with ~5 DEGs
9 months ago by Shred ★ 1.5k
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1
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1.4k
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Comment: Comment: Data preparation for a ML model
10 months ago by Shred ★ 1.5k
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1
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1.4k
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Comment: Comment: Data preparation for a ML model
10 months ago by Shred ★ 1.5k
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1
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501
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Answer: Answer: Proper HTSeq usage on bacterial genome. Don't quite understand --t
11 months ago by Shred ★ 1.5k
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1
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682
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Answer: Answer: Where to find info on VCF file format?
11 months ago by Shred ★ 1.5k
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1
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879
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Comment: Comment: How to change from gene_id to GeneID/EntrezID using R
11 months ago by Shred ★ 1.5k
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1
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1.0k
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Comment: Comment: STAR mapping two pass mode for multiple samples with split steps or one step ?
12 months ago by Shred ★ 1.5k
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0
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754
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Comment: Comment: Can we use exon- counts to calculate coverage?
12 months ago by Shred ★ 1.5k
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1
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798
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Comment: Comment: Integrated analysis of RNA-seq datasets
12 months ago by Shred ★ 1.5k
2
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0
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781
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Answer: Answer: Retrieving Chromosome Accession for Specific Gene Using Ensembl REST API
13 months ago by Shred ★ 1.5k
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0
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876
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Comment: Comment: Keplen Meyer Curve Dropping to zero
13 months ago by Shred ★ 1.5k
2
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1
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876
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Answer: Answer: Keplen Meyer Curve Dropping to zero
13 months ago by Shred ★ 1.5k
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1
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876
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Comment: Comment: Keplen Meyer Curve Dropping to zero
13 months ago by Shred ★ 1.5k
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1
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531
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Comment: Comment: python 'gnomAD_DB'
13 months ago by Shred ★ 1.5k
0
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0
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787
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Answer: Answer: GATK not working when clone to VM
14 months ago by Shred ★ 1.5k
3
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1
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754
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Answer: Answer: Develop model based on differentially expressed genes
14 months ago by Shred ★ 1.5k
0
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0
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765
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Answer: Answer: Lollipop plots for structural variation coordinates
14 months ago by Shred ★ 1.5k
1
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0
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589
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Comment: Comment: Estimating sample size from bulk RNAseq data
14 months ago by Shred ★ 1.5k
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1
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2.0k
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Comment: Comment: Typical percentage of multimapping reads in human rna-seq?
15 months ago by Shred ★ 1.5k
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0
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1.2k
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Comment: Comment: TPM normalization but library size isn't equal to 1 million
15 months ago by Shred ★ 1.5k
1
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0
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1.1k
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Comment: Comment: rank SNPs after elastic net modeling
15 months ago by Shred ★ 1.5k
0
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1
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1.1k
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Comment: Comment: rank SNPs after elastic net modeling
15 months ago by Shred ★ 1.5k
0
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1
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1.1k
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Comment: Comment: rank SNPs after elastic net modeling
15 months ago by Shred ★ 1.5k
0
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1
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988
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Comment: Comment: Segmentation fault Biopython pairwise alignment
15 months ago by Shred ★ 1.5k
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0
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1.1k
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Comment: Comment: Inquiry Regarding Somatic Analysis and Normal Sample Requirement
15 months ago by Shred ★ 1.5k
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1
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1.1k
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Comment: Comment: Inquiry Regarding Somatic Analysis and Normal Sample Requirement
15 months ago by Shred ★ 1.5k
2
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2
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1.1k
views
Answer: Answer: Inquiry Regarding Somatic Analysis and Normal Sample Requirement
16 months ago by Shred ★ 1.5k
247 results • Page 1 of 5
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