Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
2
votes
1
reply
224
views
Answer: Answer: Proper HTSeq usage on bacterial genome. Don't quite understand --t
6 weeks ago by Shred ★ 1.4k
4
votes
1
reply
340
views
Answer: Answer: Where to find info on VCF file format?
9 weeks ago by Shred ★ 1.4k
2
votes
0
replies
405
views
Answer: Answer: Retrieving Chromosome Accession for Specific Gene Using Ensembl REST API
3 months ago by Shred ★ 1.4k
2
votes
1
reply
492
views
Answer: Answer: Keplen Meyer Curve Dropping to zero
4 months ago by Shred ★ 1.4k
0
votes
0
replies
444
views
Answer: Answer: GATK not working when clone to VM
4 months ago by Shred ★ 1.4k
3
votes
1
reply
416
views
Answer: Answer: Develop model based on differentially expressed genes
4 months ago by Shred ★ 1.4k
0
votes
0
replies
427
views
Answer: Answer: Lollipop plots for structural variation coordinates
4 months ago by Shred ★ 1.4k
2
votes
2
replies
689
views
Answer: Answer: Inquiry Regarding Somatic Analysis and Normal Sample Requirement
6 months ago by Shred ★ 1.4k
1
vote
1
reply
675
views
Answer: Answer: How to get the gene ID
6 months ago by Shred ★ 1.4k
0
votes
0
replies
349
views
Answer: Answer: python script revision for sequencing depth
7 months ago by Shred ★ 1.4k
1
vote
0
replies
430
views
Answer: Answer: heatmap color key
7 months ago by Shred ★ 1.4k
1
vote
1
reply
1.3k
views
Answer: Answer: How to calculate the coverage of list of genes in whole exome data
7 months ago by Shred ★ 1.4k
2
votes
0
replies
987
views
Answer: Answer: Allele Frequency >0.5 for cancer somatic mutations?
7 months ago by Shred ★ 1.4k
4
votes
1
reply
1.0k
views
Answer: Answer: Snakemake workflow for trimmomatic
8 months ago by Shred ★ 1.4k
1
vote
1
reply
567
views
Answer: Answer: API REST ALINGMENT
8 months ago by Shred ★ 1.4k
1
vote
0
replies
544
views
Answer: Answer: RNAseq matrix containing zero values
9 months ago by Shred ★ 1.4k
2
votes
1
reply
1.1k
views
Answer: Answer: Snakemake Target rules may not contain wildcards.
11 months ago by Shred ★ 1.4k
0
votes
0
replies
614
views
Answer: Answer: Change column order in vcf file
12 months ago by Shred ★ 1.4k
0
votes
1
reply
721
views
Answer: Answer: What is the best time saving way to loop over column elements in pandas DF and r
12 months ago by Shred ★ 1.4k
2
votes
1
reply
414
views
Answer: Answer: Get a vector of 0 and 1 using codon positions
12 months ago by Shred ★ 1.4k
0
votes
0
replies
348
views
Answer: Answer: Match keys in json file with csv files
12 months ago by Shred ★ 1.4k
2
votes
1
reply
1.7k
views
Answer: Answer: Upset plot using python
13 months ago by Shred ★ 1.4k
2
votes
1
reply
554
views
Answer: Answer: Clean data with pandas
13 months ago by Shred ★ 1.4k
0
votes
1
reply
1.4k
views
Answer: Answer: Mutect2 produces 0 results for somatic mutation calling of paired-end reads (BAM
13 months ago by Shred ★ 1.4k
2
votes
0
replies
1.0k
views
Answer: Answer: Get both somatic and germline mutations from tumor only sample?
15 months ago by Shred ★ 1.4k
1
vote
1
reply
536
views
Answer: Answer: Why a gene with amplification in copy number shows downregulation in transcripto
15 months ago by Shred ★ 1.4k
2
votes
0
replies
584
views
Answer: Answer: How to create a fasta file using a list of DNA sequences data
15 months ago by Shred ★ 1.4k
3
votes
1
reply
808
views
Answer: Answer: Reading in input file into a Snakemake pipeline
16 months ago by Shred ★ 1.4k
1
vote
2
replies
824
views
Answer: Answer: is there any pipeline or best practices of detecting germline neoantigen?
16 months ago by Shred ★ 1.4k
3
votes
0
replies
662
views
Answer: Answer: Figuring out if a gene exists in a genome
16 months ago by Shred ★ 1.4k
2
votes
1
reply
663
views
Answer: Answer: Python pandas transforming int to float in gff subsetting
16 months ago by Shred ★ 1.4k
0
votes
0
replies
914
views
Answer: Answer: How to count the number of multimapped reads from a bam file?
17 months ago by Shred ★ 1.4k
0
votes
0
replies
986
views
Answer: Answer: How to extract passed SNVs from a VCF file using bcftools?
18 months ago by Shred ★ 1.4k
0
votes
1
reply
718
views
Answer: Answer: Some questions about 3'UTR regions from rat 6.0 fasta and gtf files
18 months ago by Shred ★ 1.4k
2
votes
1
reply
1.3k
views
Answer: Answer: snakemake workflow
18 months ago by Shred ★ 1.4k
2
votes
0
replies
546
views
Answer: Answer: Get GO terms for list of NCBI genes from Gene Ontology API using Python
19 months ago by Shred ★ 1.4k
1
vote
1
reply
1.0k
views
Answer: Answer: Best transcriptome assembler
20 months ago by Shred ★ 1.4k
1
vote
0
replies
786
views
Answer: Answer: How to change gene coordinate in gtf file?
21 months ago by Shred ★ 1.4k
1
vote
0
replies
602
views
Answer: Answer: Is there a tool available to check a Tm for a DNA fragment or sequence?
21 months ago by Shred ★ 1.4k
0
votes
0
replies
1.5k
views
Answer: Answer: Help with writing a loop for metaspades assembler (beginner)
21 months ago by Shred ★ 1.4k
1
vote
0
replies
3.8k
views
Answer: Answer: Snakemake 'Unexpected keyword ref in rule definition'
21 months ago by Shred ★ 1.4k
0
votes
0
replies
1.2k
views
Answer: Answer: Converting A Long List of Ensembl IDs to Gene Symbols
21 months ago by Shred ★ 1.4k
1
vote
1
reply
475
views
Answer: Answer: Extracting the mapped sequence of a certian gene
22 months ago by Shred ★ 1.4k
0
votes
0
replies
752
views
Answer: Answer: Gene Enrichment
22 months ago by Shred ★ 1.4k
0
votes
1
reply
1.9k
views
Answer: Answer: Can't convert dog ensembl IDs into gene names
23 months ago by Shred ★ 1.4k
2
votes
0
replies
1.1k
views
Answer: Answer: How to extract all sequences mapped to a transcript from Kallisto output
2.2 years ago by Shred ★ 1.4k
2
votes
0
replies
2.9k
views
Answer: Answer: From amino acid sequence to DNA sequence using Reverse Translate software
2.3 years ago by Shred ★ 1.4k
2
votes
1
reply
3.4k
views
Answer: Answer: Biopython SeqIO: AttributeError: 'str' object has no attribute 'id'
2.3 years ago by Shred ★ 1.4k
1
vote
0
replies
3.1k
views
Answer: Answer: understanding log2fold change of 0.31 and -0.25
2.4 years ago by Shred ★ 1.4k
0
votes
1
reply
2.0k
views
Answer: Answer: Convert MSTRG gene IDs to real one?
2.5 years ago by Shred ★ 1.4k
64 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6