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MarkDuplicates of a queryname sorted bam more expensive than a coordinate sorted bam
next-gen alignment
updated 3.4 years ago by 19k • written 4.1 years ago by ▴ 560
0
votes
4
replies
965
views
CWL - glob an array of output files based on a single input string
cwl
4.1 years ago by drkennetz ▴ 560
9
votes
7
replies
2.4k
views
Add an item from input to an output array in CWL
cwl
updated 4.7 years ago by ★ 1.9k • written 4.8 years ago by ▴ 560
1
vote
4
replies
2.1k
views
Depth of Coverage without Read Overlap
next-gen
updated 5.5 years ago by ★ 2.5k • written 5.5 years ago by ▴ 560
4
votes
4
replies
1.3k
views
If a string appears twice in column 1, select the higher value in column 2
awk bash
updated 5.6 years ago by 11k • written 5.8 years ago by ▴ 560
3
votes
5
replies
1.4k
views
Does Cutadapt change the x,y coordinates in the fastq read name?
next-gen alignment
5.7 years ago by drkennetz ▴ 560
3
votes
3
replies
1.5k
views
cwlexec and cwltool not interpreting baseCommand the same way
cwl bed
updated 5.9 years ago by ★ 1.9k • written 5.9 years ago by ▴ 560
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