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4
votes
0
replies
412
views
Answer:
Answer: Tool for aligning short protein sequences
8 weeks ago by
Andrzej Zielezinski
11k
2
votes
0
replies
364
views
Answer:
Answer: Choosing right statistical test in genomics
8 weeks ago by
Andrzej Zielezinski
11k
2
votes
1
reply
553
views
Answer:
Answer: Global Alignment
9 weeks ago by
Andrzej Zielezinski
11k
1
vote
0
replies
464
views
Comment:
Comment: understand the gene result in ncbi
3 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
1.6k
views
Comment:
Comment: fasta sequences into non-overlapping k-mers using python
4 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.6k
views
Answer:
Answer: fasta sequences into non-overlapping k-mers using python
4 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
681
views
Answer:
Answer: Extracting k-mer counts from multiple genome sequence files
4 months ago by
Andrzej Zielezinski
11k
4
votes
2
replies
520
views
Answer:
Answer: Filtering a fasta file based on blast results file
5 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
1.7k
views
Answer:
Answer: How to delete spaces in rows from csv file in Python
5 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
1.7k
views
Comment:
Comment: How to delete spaces in rows from csv file in Python
5 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
1.7k
views
Comment:
Comment: How to delete spaces in rows from csv file in Python
5 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.4k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
1.4k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
2
votes
1
reply
1.4k
views
Answer:
Answer: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
1
vote
0
replies
1.4k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
1.4k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
1.4k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
565
views
Answer:
Answer: Number of sequences in RefSeq.
5 months ago by
Andrzej Zielezinski
11k
1
vote
1
reply
1.4k
views
Comment:
Comment: Parsing a genebank file and tsv file - extracting and outputting specific data t
5 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
500
views
Comment:
Comment: Making my python code better
5 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
456
views
Comment:
Comment: Parsing a genbank file and outputting specific feature information to a csv usin
6 months ago by
Andrzej Zielezinski
11k
2
votes
0
replies
4.6k
views
Comment:
Comment: get the uniprot accession from ensembl protein ID
6 months ago by
Andrzej Zielezinski
11k
2
votes
1
reply
456
views
Answer:
Answer: Parsing a genbank file and outputting specific feature information to a csv usin
6 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
286
views
Answer:
Answer: extracting data from genbank file
6 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
618
views
Answer:
Answer: From fastq files to fasta
6 months ago by
Andrzej Zielezinski
11k
2
votes
0
replies
425
views
Answer:
Answer: how to filter fasta file?
6 months ago by
Andrzej Zielezinski
11k
1
vote
1
reply
636
views
Comment:
Comment: BLAST, set a limit to the number of hits in output
6 months ago by
Andrzej Zielezinski
11k
1
vote
0
replies
387
views
Comment:
Comment: Sequence identity between two protein sequences
6 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
387
views
Answer:
Answer: Sequence identity between two protein sequences
6 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
644
views
Comment:
Comment: Python complex formula using the items of a dictionary (or a list of dictionarie
6 months ago by
Andrzej Zielezinski
11k
5
votes
2
replies
644
views
Answer:
Answer: Python complex formula using the items of a dictionary (or a list of dictionarie
6 months ago by
Andrzej Zielezinski
11k
4
votes
1
reply
409
views
Answer:
Answer: Advanced search for the sequences on NCBI website
7 months ago by
Andrzej Zielezinski
11k
4
votes
0
replies
484
views
Answer:
Answer: How a fastq.gz file is formatted?
8 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
748
views
Answer:
Answer: How can I remove the sequences that contain ambiogous amino acids from a multipl
8 months ago by
Andrzej Zielezinski
11k
3
votes
0
replies
475
views
Answer:
Answer: Precision-recall curve to compare metagenome classifiers to a gold standard - Is
8 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
667
views
Comment:
Comment: Only getting 25 results from UniProt REST ID Mapping
8 months ago by
Andrzej Zielezinski
11k
4
votes
1
reply
667
views
Answer:
Answer: Only getting 25 results from UniProt REST ID Mapping
8 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
330
views
Comment:
Comment: How many nr database subdirectories are there?
8 months ago by
Andrzej Zielezinski
11k
4
votes
1
reply
720
views
Answer:
Answer: UniProt REST Mapping Problem
8 months ago by
Andrzej Zielezinski
11k
0
votes
1
reply
476
views
Answer:
Answer: virus classification
12 months ago by
Andrzej Zielezinski
11k
1
vote
1
reply
504
views
Comment:
Comment: Too Many Protein Sequences To Align, Advice?
12 months ago by
Andrzej Zielezinski
11k
2
votes
1
reply
504
views
Answer:
Answer: Too Many Protein Sequences To Align, Advice?
12 months ago by
Andrzej Zielezinski
11k
3
votes
2
replies
401
views
Ortholog clusters in Bacteria
orthologs
gene
family
bacteria
GtDB
updated 13 months ago by
Mensur Dlakic
★ 23k • written 13 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
423
views
Comment:
Comment: Can ETE3 list all bacterial species present in NCBI Taxonomy?
13 months ago by
Andrzej Zielezinski
11k
1
vote
2
replies
423
views
Can ETE3 list all bacterial species present in NCBI Taxonomy?
NCBI
ETE3
taxonomy
13 months ago by
Andrzej Zielezinski
11k
0
votes
0
replies
894
views
Comment:
Comment: proteins global alignment using BLOSUM80
15 months ago by
Andrzej Zielezinski
11k
2
votes
1
reply
894
views
Answer:
Answer: proteins global alignment using BLOSUM80
15 months ago by
Andrzej Zielezinski
11k
3
votes
1
reply
590
views
Any tool to identify HGT events based on gene and species trees?
hgt
phylogeny
tree
updated 17 months ago by
andres.firrincieli
3.1k • written 17 months ago by
Andrzej Zielezinski
11k
1
vote
1
reply
2.4k
views
Comment:
Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
18 months ago by
Andrzej Zielezinski
11k
1
vote
1
reply
2.4k
views
Comment:
Comment: Use BLAST Command Line Applications to run a folder of many sequences against a
18 months ago by
Andrzej Zielezinski
11k
443 results • Page
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