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3
votes
1
reply
3.9k
views
Answer: Answer: counting reads over repeats
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
5.4k
views
Comment: C: problem about SHRiMP2 solving AB SOLID
updated 4.7 years ago by 45k • written 11.2 years ago by 12k
4
votes
0
replies
3.7k
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Comment: Comment: How to find the homologous mouse site of human SNP
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
27k
views
Comment: Comment: Problems installing samtools on linux (make command)
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
4
votes
0
replies
3.6k
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Comment: Comment: Extraction of splicing events and their quantification
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
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0
replies
19k
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Comment: Comment: Create a custom .gtf file with a list of genes
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
5.4k
views
Comment: C: problem about SHRiMP2 solving AB SOLID
updated 4.7 years ago by 45k • written 11.2 years ago by 12k
4
votes
1
reply
14k
views
Answer: Answer: I need to download a list of all human genes with their respective Ensembl gene
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
45k
views
Comment: C: What is Differential Expression?
11.2 years ago by Ashutosh Pandey 12k
0
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0
replies
22k
views
Comment: Comment: What are good settings for filtering VCF files?
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
24
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2
replies
22k
views
Answer: Answer: What are good settings for filtering VCF files?
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
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1
reply
4.5k
views
Answer: Answer: GATK vcf file
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
1
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0
replies
2.6k
views
Answer: Answer: Which means the default library orientation?
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
2
votes
0
replies
3.2k
views
Comment: Comment: eQTL database with information of which allele is associated with higher express
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
0
replies
70k
views
Comment: Comment: Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
3
votes
1
reply
3.2k
views
Answer: Answer: Number of pseudogenes in NCBI GRCh37
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
70k
views
Comment: Comment: Recommended Tools For Alternative Splicing Detection From Rna-Seq Data
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
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0
replies
7.1k
views
Comment: C: Create smaller bam file based on the list of sequences
11.2 years ago by Ashutosh Pandey 12k
0
votes
0
replies
7.1k
views
Comment: Comment: Create smaller bam file based on the list of sequences
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
0
replies
9.2k
views
Comment: Comment: BWA paired reads have different names error
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
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1
reply
9.2k
views
Comment: Comment: BWA paired reads have different names error
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
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0
replies
11k
views
Comment: Comment: Split a multisample bam using RG tag information
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
11
votes
1
reply
11k
views
Answer: Answer: Split a multisample bam using RG tag information
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
11k
views
Comment: C: Split a multisample bam using RG tag information
11.2 years ago by Ashutosh Pandey 12k
1
vote
1
reply
6.6k
views
Comment: Comment: convert from solid fastq to sanger fastq
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
0
replies
5.0k
views
Comment: Comment: using GATK UnifiedGenotyper on a single chromosome
updated 3.9 years ago by 45k • written 11.2 years ago by 12k
0
votes
1
reply
5.5k
views
Comment: Comment: Extracting features from a file from another file with an ID list
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
0
replies
3.2k
views
Comment: Comment: How to calculate protein length according to SNP position
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
1
reply
5.5k
views
Answer: C: Extracting features from a file from another file with an ID list
11.3 years ago by Ashutosh Pandey 12k
0
votes
1
reply
6.6k
views
Comment: C: convert from solid fastq to sanger fastq
11.3 years ago by Ashutosh Pandey 12k
0
votes
0
replies
14k
views
Comment: C: awk select duplicated lines
11.3 years ago by Ashutosh Pandey 12k
1
vote
0
replies
14k
views
Answer: Answer: awk select duplicated lines
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
1
reply
4.7k
views
Comment: Comment: matching relationship between the old and new coordinate lists after liftover
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
1
vote
0
replies
11k
views
Comment: Comment: Removing sequences from .fasta files based on name prefix
updated 3.8 years ago by 45k • written 11.3 years ago by 12k
1
vote
1
reply
11k
views
Comment: Comment: Removing sequences from .fasta files based on name prefix
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
2
votes
1
reply
11k
views
Comment: Comment: Removing sequences from .fasta files based on name prefix
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
5
votes
0
replies
23k
views
Answer: Answer: Trimming fastq with quality
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
0
replies
4.4k
views
Comment: Comment: Calculating Mate Pair Offset from SAM file
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
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1
reply
4.4k
views
Comment: Comment: Calculating Mate Pair Offset from SAM file
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
5
votes
2
replies
4.4k
views
Answer: Answer: Calculating Mate Pair Offset from SAM file
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
2
votes
0
replies
6.4k
views
Answer: C: how to install macs and use it
11.3 years ago by Ashutosh Pandey 12k
2
votes
0
replies
4.5k
views
Comment: Comment: List of known transcription factor binding sites along with the type of transcri
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
1
reply
3.9k
views
Comment: C: Alignment to reference containing ambiguity code
11.3 years ago by Ashutosh Pandey 12k
1
vote
0
replies
3.8k
views
Comment: Comment: annotation of duplicate reads
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
0
replies
12k
views
Comment: Comment: Remove Header from SAM - File
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
1
reply
4.4k
views
Comment: Comment: How to determine which read is mapped to the incorrect chromosome?
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
0
votes
0
replies
3.4k
views
Comment: Comment: Combining quality scores when aligning/assembling
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
1
vote
1
reply
4.8k
views
Comment: Comment: Looking for database to download transcriptome annotation file
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
20
votes
11
replies
21k
views
7 follow
Rnaseq Differential Expression
rna-seq replicates
updated 11.3 years ago by • 0 • written 13.4 years ago by 12k
1
vote
0
replies
3.7k
views
Comment: Comment: SAM File target extraction
updated 3.9 years ago by 45k • written 11.3 years ago by 12k
1,162 results • Page 11 of 24
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