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Comment: Comment: Move Cytoscape "CytoscapeConfiguration" directory
14 months ago by Lucy ▴ 140
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1.8k
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Comment: Comment: Gini coefficient TCR repertoire
15 months ago by Lucy ▴ 140
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0
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533
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Comment: Comment: How does --primary work with -M and --fractional options featureCounts?
2.1 years ago by Lucy ▴ 140
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3
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2.0k
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Comment: Comment: featureCounts parameters
2.2 years ago by Lucy ▴ 140
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2.0k
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Comment: Comment: featureCounts parameters
2.2 years ago by Lucy ▴ 140
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1
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4.7k
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Comment: Comment: Which counts to use for RNA-seq heatmap and PCA?
2.7 years ago by Lucy ▴ 140
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1
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4.7k
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Comment: Comment: Which counts to use for RNA-seq heatmap and PCA?
2.7 years ago by Lucy ▴ 140
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1
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6.9k
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Comment: Comment: GATK Input files reference and features have incompatible contigs: No overlappin
2.7 years ago by Lucy ▴ 140
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724
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Comment: Comment: Rename "SM" tag in read group only
2.7 years ago by Lucy ▴ 140
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0
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3.0k
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Comment: Comment: Error with Seurat subset function
2.8 years ago by Lucy ▴ 140
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1
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1.8k
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Comment: Comment: Gini coefficient TCR repertoire
2.9 years ago by Lucy ▴ 140
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1
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1.5k
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Comment: Comment: Identification of modules of genes that vary over pseudotime (scRNA-seq pseudoti
3.0 years ago by Lucy ▴ 140
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0
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988
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Comment: A: Negbinom vs. logistic regression for Seurat FindMarkers()
3.3 years ago by Lucy ▴ 140
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1
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3.9k
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Comment: C: Differential expression analysis in Seurat
3.4 years ago by Lucy ▴ 140
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0
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1.7k
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Comment: C: Correlation plot sized by another variable
3.7 years ago by Lucy ▴ 140
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1
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1.7k
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Comment: C: Correlation plot sized by another variable
3.7 years ago by Lucy ▴ 140
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0
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1.7k
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Comment: C: Correlation plot sized by another variable
3.7 years ago by Lucy ▴ 140
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1
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1.7k
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Comment: C: Correlation plot sized by another variable
3.7 years ago by Lucy ▴ 140
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1
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1.7k
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Comment: A: Correlation plot sized by another variable
3.7 years ago by Lucy ▴ 140
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0
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7.1k
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Comment: C: findGenomeMotif.pl in Homer couldn't work properly
4.4 years ago by Lucy ▴ 140
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1
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5.1k
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Comment: C: problem with HOMER findMotifsGenome.pl
4.4 years ago by Lucy ▴ 140
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0
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4.7k
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Comment: C: Which counts to use for RNA-seq heatmap and PCA?
4.4 years ago by Lucy ▴ 140
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2
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4.7k
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Comment: A: Which counts to use for RNA-seq heatmap and PCA?
4.4 years ago by Lucy ▴ 140
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0
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14k
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Comment: C: biplot scaling options (ggbiplot)
4.4 years ago by Lucy ▴ 140
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1
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14k
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Comment: A: biplot scaling options (ggbiplot)
4.4 years ago by Lucy ▴ 140
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1
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1.1k
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Comment: C: DEsingle differential-expression analysis
4.4 years ago by Lucy ▴ 140
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1
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3.5k
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Comment: C: Seurat sctransform return.only.var.genes = FALSE
4.5 years ago by Lucy ▴ 140
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3.5k
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Comment: C: Seurat sctransform return.only.var.genes = FALSE
4.5 years ago by Lucy ▴ 140
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0
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5.3k
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Comment: C: RNA velocity on 5' 10x data?
4.5 years ago by Lucy ▴ 140
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0
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5.3k
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Comment: C: RNA velocity on 5' 10x data?
4.5 years ago by Lucy ▴ 140
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0
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2.4k
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Comment: C: Differential-expression analysis using logistic regression in Seurat - glm.fit w
4.5 years ago by Lucy ▴ 140
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0
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6.9k
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Comment: C: Harmony batch correction vs. regressing out donor effect in Seurat
4.5 years ago by Lucy ▴ 140
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1
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6.9k
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Comment: C: Harmony batch correction vs. regressing out donor effect in Seurat
4.5 years ago by Lucy ▴ 140
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1.4k
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Comment: C: ATAC-seq transcription factor binding prediction
4.5 years ago by Lucy ▴ 140
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1
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2.6k
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Comment: C: Aligning RNA-seq and ATAC-seq gene annotations
5.3 years ago by Lucy ▴ 140
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14k
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Comment: C: FRIP score ATAC-seq
5.3 years ago by Lucy ▴ 140
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0
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4.0k
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Comment: A: HOMER de novo motif enrichment
5.4 years ago by Lucy ▴ 140
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0
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2.3k
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Comment: C: featureCounts allowMultiOverlap - fractional or not?
5.6 years ago by Lucy ▴ 140
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0
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1.7k
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Comment: C: When using MACS2 with -f BAM, it is possible to have a shift other than 0?
5.6 years ago by Lucy ▴ 140
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1
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2.4k
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Comment: C: Determine peak summits after IDR analysis
5.6 years ago by Lucy ▴ 140
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0
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2.4k
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Comment: C: Determine peak summits after IDR analysis
5.6 years ago by Lucy ▴ 140
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1
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1.7k
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Comment: C: When using MACS2 with -f BAM, it is possible to have a shift other than 0?
5.6 years ago by Lucy ▴ 140
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0
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36k
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Comment: C: ATAC-seq peak calling with MACS
5.7 years ago by Lucy ▴ 140
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1
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1.8k
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Comment: C: shift direction in ATAC/DNase data?
5.7 years ago by Lucy ▴ 140
44 results • Page 1 of 1
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