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Comment: Comment: Move Cytoscape "CytoscapeConfiguration" directory
19 months ago by Lucy ▴ 140
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2.1k
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Comment: Comment: Gini coefficient TCR repertoire
20 months ago by Lucy ▴ 140
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0
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646
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Comment: Comment: How does --primary work with -M and --fractional options featureCounts?
2.6 years ago by Lucy ▴ 140
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3
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2.3k
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Comment: Comment: featureCounts parameters
2.6 years ago by Lucy ▴ 140
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2.3k
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Comment: Comment: featureCounts parameters
2.6 years ago by Lucy ▴ 140
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1
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5.1k
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Comment: Comment: Which counts to use for RNA-seq heatmap and PCA?
3.1 years ago by Lucy ▴ 140
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1
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5.1k
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Comment: Comment: Which counts to use for RNA-seq heatmap and PCA?
3.1 years ago by Lucy ▴ 140
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1
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8.0k
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Comment: Comment: GATK Input files reference and features have incompatible contigs: No overlappin
3.2 years ago by Lucy ▴ 140
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805
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Comment: Comment: Rename "SM" tag in read group only
3.2 years ago by Lucy ▴ 140
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0
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3.4k
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Comment: Comment: Error with Seurat subset function
3.3 years ago by Lucy ▴ 140
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1
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2.1k
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Comment: Comment: Gini coefficient TCR repertoire
3.4 years ago by Lucy ▴ 140
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1
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1.8k
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Comment: Comment: Identification of modules of genes that vary over pseudotime (scRNA-seq pseudoti
3.5 years ago by Lucy ▴ 140
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1.1k
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Comment: A: Negbinom vs. logistic regression for Seurat FindMarkers()
3.8 years ago by Lucy ▴ 140
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1
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4.2k
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Comment: C: Differential expression analysis in Seurat
3.8 years ago by Lucy ▴ 140
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0
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2.0k
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Comment: C: Correlation plot sized by another variable
4.2 years ago by Lucy ▴ 140
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1
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2.0k
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Comment: C: Correlation plot sized by another variable
4.2 years ago by Lucy ▴ 140
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0
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2.0k
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Comment: C: Correlation plot sized by another variable
4.2 years ago by Lucy ▴ 140
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1
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2.0k
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Comment: C: Correlation plot sized by another variable
4.2 years ago by Lucy ▴ 140
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1
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2.0k
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Comment: A: Correlation plot sized by another variable
4.2 years ago by Lucy ▴ 140
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0
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7.8k
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Comment: C: findGenomeMotif.pl in Homer couldn't work properly
4.8 years ago by Lucy ▴ 140
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1
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5.7k
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Comment: C: problem with HOMER findMotifsGenome.pl
4.8 years ago by Lucy ▴ 140
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0
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5.1k
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Comment: C: Which counts to use for RNA-seq heatmap and PCA?
4.8 years ago by Lucy ▴ 140
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2
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5.1k
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Comment: A: Which counts to use for RNA-seq heatmap and PCA?
4.8 years ago by Lucy ▴ 140
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0
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14k
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Comment: C: biplot scaling options (ggbiplot)
4.9 years ago by Lucy ▴ 140
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1
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14k
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Comment: A: biplot scaling options (ggbiplot)
4.9 years ago by Lucy ▴ 140
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1
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1.3k
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Comment: C: DEsingle differential-expression analysis
4.9 years ago by Lucy ▴ 140
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1
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3.8k
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Comment: C: Seurat sctransform return.only.var.genes = FALSE
4.9 years ago by Lucy ▴ 140
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0
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3.8k
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Comment: C: Seurat sctransform return.only.var.genes = FALSE
4.9 years ago by Lucy ▴ 140
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0
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5.7k
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Comment: C: RNA velocity on 5' 10x data?
4.9 years ago by Lucy ▴ 140
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0
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5.7k
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Comment: C: RNA velocity on 5' 10x data?
4.9 years ago by Lucy ▴ 140
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2.5k
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Comment: C: Differential-expression analysis using logistic regression in Seurat - glm.fit w
5.0 years ago by Lucy ▴ 140
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0
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7.5k
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Comment: C: Harmony batch correction vs. regressing out donor effect in Seurat
5.0 years ago by Lucy ▴ 140
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1
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7.5k
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Comment: C: Harmony batch correction vs. regressing out donor effect in Seurat
5.0 years ago by Lucy ▴ 140
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1.5k
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Comment: C: ATAC-seq transcription factor binding prediction
5.0 years ago by Lucy ▴ 140
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1
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2.7k
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Comment: C: Aligning RNA-seq and ATAC-seq gene annotations
5.8 years ago by Lucy ▴ 140
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15k
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Comment: C: FRIP score ATAC-seq
5.8 years ago by Lucy ▴ 140
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0
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4.2k
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Comment: A: HOMER de novo motif enrichment
5.9 years ago by Lucy ▴ 140
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2.4k
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Comment: C: featureCounts allowMultiOverlap - fractional or not?
6.0 years ago by Lucy ▴ 140
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0
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1.9k
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Comment: C: When using MACS2 with -f BAM, it is possible to have a shift other than 0?
6.1 years ago by Lucy ▴ 140
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1
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2.6k
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Comment: C: Determine peak summits after IDR analysis
6.1 years ago by Lucy ▴ 140
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0
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2.6k
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Comment: C: Determine peak summits after IDR analysis
6.1 years ago by Lucy ▴ 140
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1
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1.9k
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Comment: C: When using MACS2 with -f BAM, it is possible to have a shift other than 0?
6.1 years ago by Lucy ▴ 140
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0
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38k
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Comment: C: ATAC-seq peak calling with MACS
6.1 years ago by Lucy ▴ 140
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1
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1.9k
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Comment: C: shift direction in ATAC/DNase data?
6.1 years ago by Lucy ▴ 140
44 results • Page 1 of 1
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