Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : comments
0
votes
0
replies
517
views
Comment: Comment: Move Cytoscape "CytoscapeConfiguration" directory
7 months ago by Lucy ▴ 120
0
votes
0
replies
1.6k
views
Comment: Comment: Gini coefficient TCR repertoire
8 months ago by Lucy ▴ 120
0
votes
0
replies
412
views
Comment: Comment: How does --primary work with -M and --fractional options featureCounts?
18 months ago by Lucy ▴ 120
0
votes
3
replies
1.6k
views
Comment: Comment: featureCounts parameters
19 months ago by Lucy ▴ 120
0
votes
0
replies
1.6k
views
Comment: Comment: featureCounts parameters
19 months ago by Lucy ▴ 120
0
votes
1
reply
4.1k
views
Comment: Comment: Which counts to use for RNA-seq heatmap and PCA?
2.1 years ago by Lucy ▴ 120
0
votes
1
reply
4.1k
views
Comment: Comment: Which counts to use for RNA-seq heatmap and PCA?
2.1 years ago by Lucy ▴ 120
1
vote
1
reply
5.5k
views
Comment: Comment: GATK Input files reference and features have incompatible contigs: No overlappin
2.2 years ago by Lucy ▴ 120
0
votes
0
replies
644
views
Comment: Comment: Rename "SM" tag in read group only
2.2 years ago by Lucy ▴ 120
0
votes
0
replies
2.6k
views
Comment: Comment: Error with Seurat subset function
2.2 years ago by Lucy ▴ 120
0
votes
1
reply
1.6k
views
Comment: Comment: Gini coefficient TCR repertoire
2.4 years ago by Lucy ▴ 120
0
votes
1
reply
1.3k
views
Comment: Comment: Identification of modules of genes that vary over pseudotime (scRNA-seq pseudoti
2.4 years ago by Lucy ▴ 120
0
votes
0
replies
841
views
Comment: A: Negbinom vs. logistic regression for Seurat FindMarkers()
2.8 years ago by Lucy ▴ 120
0
votes
1
reply
3.6k
views
Comment: C: Differential expression analysis in Seurat
2.8 years ago by Lucy ▴ 120
0
votes
0
replies
1.4k
views
Comment: C: Correlation plot sized by another variable
3.2 years ago by Lucy ▴ 120
0
votes
1
reply
1.4k
views
Comment: C: Correlation plot sized by another variable
3.2 years ago by Lucy ▴ 120
0
votes
0
replies
1.4k
views
Comment: C: Correlation plot sized by another variable
3.2 years ago by Lucy ▴ 120
0
votes
1
reply
1.4k
views
Comment: C: Correlation plot sized by another variable
3.2 years ago by Lucy ▴ 120
0
votes
1
reply
1.4k
views
Comment: A: Correlation plot sized by another variable
3.2 years ago by Lucy ▴ 120
0
votes
0
replies
6.4k
views
Comment: C: findGenomeMotif.pl in Homer couldn't work properly
3.8 years ago by Lucy ▴ 120
0
votes
1
reply
4.3k
views
Comment: C: problem with HOMER findMotifsGenome.pl
3.8 years ago by Lucy ▴ 120
0
votes
0
replies
4.1k
views
Comment: C: Which counts to use for RNA-seq heatmap and PCA?
3.8 years ago by Lucy ▴ 120
0
votes
2
replies
4.1k
views
Comment: A: Which counts to use for RNA-seq heatmap and PCA?
3.8 years ago by Lucy ▴ 120
0
votes
0
replies
13k
views
Comment: C: biplot scaling options (ggbiplot)
3.8 years ago by Lucy ▴ 120
0
votes
1
reply
13k
views
Comment: A: biplot scaling options (ggbiplot)
3.8 years ago by Lucy ▴ 120
0
votes
1
reply
1.0k
views
Comment: C: DEsingle differential-expression analysis
3.8 years ago by Lucy ▴ 120
0
votes
1
reply
3.1k
views
Comment: C: Seurat sctransform return.only.var.genes = FALSE
3.9 years ago by Lucy ▴ 120
1
vote
0
replies
3.1k
views
Comment: C: Seurat sctransform return.only.var.genes = FALSE
3.9 years ago by Lucy ▴ 120
1
vote
0
replies
4.9k
views
Comment: C: RNA velocity on 5' 10x data?
3.9 years ago by Lucy ▴ 120
0
votes
0
replies
4.9k
views
Comment: C: RNA velocity on 5' 10x data?
3.9 years ago by Lucy ▴ 120
0
votes
0
replies
2.2k
views
Comment: C: Differential-expression analysis using logistic regression in Seurat - glm.fit w
3.9 years ago by Lucy ▴ 120
0
votes
0
replies
6.2k
views
Comment: C: Harmony batch correction vs. regressing out donor effect in Seurat
4.0 years ago by Lucy ▴ 120
0
votes
1
reply
6.2k
views
Comment: C: Harmony batch correction vs. regressing out donor effect in Seurat
4.0 years ago by Lucy ▴ 120
0
votes
0
replies
1.3k
views
Comment: C: ATAC-seq transcription factor binding prediction
4.0 years ago by Lucy ▴ 120
0
votes
1
reply
2.4k
views
Comment: C: Aligning RNA-seq and ATAC-seq gene annotations
4.7 years ago by Lucy ▴ 120
0
votes
0
replies
12k
views
Comment: C: FRIP score ATAC-seq
4.7 years ago by Lucy ▴ 120
0
votes
0
replies
3.8k
views
Comment: A: HOMER de novo motif enrichment
4.8 years ago by Lucy ▴ 120
0
votes
0
replies
2.2k
views
Comment: C: featureCounts allowMultiOverlap - fractional or not?
5.0 years ago by Lucy ▴ 120
0
votes
0
replies
1.5k
views
Comment: C: When using MACS2 with -f BAM, it is possible to have a shift other than 0?
5.0 years ago by Lucy ▴ 120
0
votes
1
reply
2.1k
views
Comment: C: Determine peak summits after IDR analysis
5.0 years ago by Lucy ▴ 120
0
votes
0
replies
2.1k
views
Comment: C: Determine peak summits after IDR analysis
5.0 years ago by Lucy ▴ 120
0
votes
1
reply
1.5k
views
Comment: C: When using MACS2 with -f BAM, it is possible to have a shift other than 0?
5.0 years ago by Lucy ▴ 120
0
votes
0
replies
34k
views
Comment: C: ATAC-seq peak calling with MACS
5.1 years ago by Lucy ▴ 120
0
votes
1
reply
1.7k
views
Comment: C: shift direction in ATAC/DNase data?
5.1 years ago by Lucy ▴ 120
44 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6