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Comment: Comment: IGV uses gene names as chromosome and the annotations file does not work
2.2 years ago by danvoronov ▴ 30
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Comment: Comment: IGV uses gene names as chromosome and the annotations file does not work
2.2 years ago by danvoronov ▴ 30
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3.9k
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Answer: Answer: Converting an output de-novo transcriptome assembled with Trinity to a .gff3 fil
2.2 years ago by danvoronov ▴ 30
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1.4k
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Comment: Comment: How to make BLASTN be aware of short read?
2.6 years ago by danvoronov ▴ 30
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1.4k
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Comment: Comment: Integrated Genome Viewer "Motif Finder" like-tool for the command line?
2.6 years ago by danvoronov ▴ 30
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1.5k
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Comment: Comment: Species level taxID
2.8 years ago by danvoronov ▴ 30
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2
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1.2k
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Genome aligner that shows annotations too
alignment genome annotations
2.8 years ago by danvoronov ▴ 30
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1.2k
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Answer: Answer: Genome aligner that shows annotations too
2.8 years ago by danvoronov ▴ 30
1
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3
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1.5k
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Species level taxID
blast taxIDs edirect ncbi
updated 2.8 years ago by 142k • written 2.8 years ago by ▴ 30
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1.1k
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Gviz histogram plot height
gviz R plots ChIP-Seq
3.5 years ago by danvoronov ▴ 30
2
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1
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688
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Trinity transcriptome assembly
trinity RNA-Seq assembly
updated 4.5 years ago by 35k • written 4.5 years ago by ▴ 30
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2.5k
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Comment: A: What to think about when treating scRNA-Seq data as bulk RNA-Seq data
4.5 years ago by danvoronov ▴ 30
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3.3k
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Answer: A: Finding differences in motif enrichment between ATAC peak samples?
4.6 years ago by danvoronov ▴ 30
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1.4k
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Answer: A: read a scRNA-seq matirx with Seurat
4.6 years ago by danvoronov ▴ 30
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1.4k
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Answer: A: ATAC-seq macs2 peak splitting in sliding windows
4.6 years ago by danvoronov ▴ 30
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