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2
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1
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443
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Answer:
Answer: How to add exon annotations to genome annotation
4 months ago by
alex.zaccaron
▴ 410
0
votes
1
reply
400
views
Comment:
Comment: error in determining minimum contigs in Velvet
5 months ago by
alex.zaccaron
▴ 410
2
votes
0
replies
769
views
Answer:
Answer: Why is my genome assembly not aligning well?
7 months ago by
alex.zaccaron
▴ 410
4
votes
2
replies
1.1k
views
Answer:
Answer: Short Read Data Genome Assembly
7 months ago by
alex.zaccaron
▴ 410
1
vote
1
reply
886
views
Comment:
Comment: CAZy database has multiple family sequence...
7 months ago by
alex.zaccaron
▴ 410
0
votes
1
reply
567
views
Comment:
Comment: Specific databases for NRPS and RiPP annotation
2.1 years ago by
alex.zaccaron
▴ 410
2
votes
1
reply
2.2k
views
Answer:
Answer: bedtools intersect error: Invalid record in file
2.3 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
1.1k
views
Comment:
Comment: Question for Splice variants and Alternative splicing
2.5 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
4.9k
views
Answer:
Answer: conda error
2.6 years ago by
alex.zaccaron
▴ 410
2
votes
1
reply
1.2k
views
Answer:
Answer: How to pipe awk of bed file into samtools to extract fasta sequences?
2.6 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
928
views
Comment:
Comment: Sum values in a row and compare the results to a value with awk or sed
2.6 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
1.4k
views
Comment:
Comment: Seeking simple HiC mapping and visualization tutorial for small genome
2.7 years ago by
alex.zaccaron
▴ 410
3
votes
1
reply
1.4k
views
Answer:
Answer: bash script
2.7 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
1.1k
views
Comment:
Comment: Exonerate - issues when running it
2.7 years ago by
alex.zaccaron
▴ 410
1
vote
0
replies
527
views
Comment:
Comment: Checking for gene expression in transcriptome - 1 sample RNASeq
2.8 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.3k
views
Comment:
C: Interpreting first round of maker
3.1 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.6k
views
Comment:
C: Convert .sqn file to .gbk
3.2 years ago by
alex.zaccaron
▴ 410
1
vote
0
replies
1.2k
views
Comment:
C: How to check for completeness of a mitochondrial or chloroplast genome?
3.2 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
3.7k
views
Comment:
C: mummer dot plot
3.2 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
3.7k
views
Comment:
C: mummer dot plot
3.2 years ago by
alex.zaccaron
▴ 410
1
vote
0
replies
942
views
Comment:
C: Pac bio assembler
3.3 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
813
views
Answer:
C: Analysis of host-parasite mixed transcriptome
3.9 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.5k
views
Comment:
C: Why the Trimmomatic does not remove some adapters? How do I add a new sequence t
3.9 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.1k
views
Comment:
C: Error downloading streams from SRA-ncbi when running fastq-dump
3.9 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
2.5k
views
Comment:
C: Correct gtf file format (AGAT toolkit)
3.9 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
3.7k
views
Comment:
C: Too many unmapped reads - STAR alignment
3.9 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
1.6k
views
Comment:
C: Gene prediction programs predicting different genes
3.9 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
1.6k
views
Answer:
C: Gene prediction programs predicting different genes
3.9 years ago by
alex.zaccaron
▴ 410
2
votes
0
replies
2.1k
views
Answer:
A: TransDecoder in Linux
4.0 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.2k
views
Comment:
C: How can I fix frameshift errors in assembled genome?
4.1 years ago by
alex.zaccaron
▴ 410
1
vote
0
replies
885
views
Comment:
C: Contig longer than mitochondrial sequence. Explanation ?
4.2 years ago by
alex.zaccaron
▴ 410
0
votes
2
replies
1.9k
views
Comment:
C: Extract N amino acids from fasta file
4.4 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.9k
views
Comment:
C: Extract N amino acids from fasta file
4.4 years ago by
alex.zaccaron
▴ 410
2
votes
0
replies
1.9k
views
Comment:
C: Why map reads back to assembly?
4.5 years ago by
alex.zaccaron
▴ 410
1
vote
0
replies
2.0k
views
Comment:
C: Polish PacBio assembly with Hi-C reads
4.5 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.1k
views
Comment:
C: How to minimize chimeric transcripts assembled with StringTie
4.5 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
1.1k
views
How to minimize chimeric transcripts assembled with StringTie
stringtie
rna-seq
transcriptome
4.5 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
3.5k
views
Comment:
C: Assembly statistics: abyss & bbmap
4.5 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
3.5k
views
Comment:
C: Assembly statistics: abyss & bbmap
4.5 years ago by
alex.zaccaron
▴ 410
0
votes
2
replies
3.8k
views
Comment:
C: Converting an output de-novo transcriptome assembled with Trinity to a .gff3 fil
4.6 years ago by
alex.zaccaron
▴ 410
4
votes
0
replies
2.7k
views
Answer:
C: Filtering BED file for interval length
4.6 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
3.7k
views
Comment:
C: mummer dot plot
4.6 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
3.7k
views
Comment:
C: mummer dot plot
4.6 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
1.3k
views
Comment:
C: Is it much better to use 3rd generation full-length transcriptome than 2nd when
4.7 years ago by
alex.zaccaron
▴ 410
1
vote
1
reply
1.6k
views
Comment:
C: How to compare two files and grep one smaller and greater numbers
4.7 years ago by
alex.zaccaron
▴ 410
3
votes
1
reply
2.3k
views
Answer:
C: Fasta extraction from bed file
4.7 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
2.0k
views
Comment:
C: Polish PacBio assembly with Hi-C reads
4.7 years ago by
alex.zaccaron
▴ 410
2
votes
4
replies
2.0k
views
Polish PacBio assembly with Hi-C reads
assembly
sequencing
4.7 years ago by
alex.zaccaron
▴ 410
0
votes
0
replies
1.6k
views
Comment:
C: "count"in the snpEFF html output
5.5 years ago by
alex.zaccaron
▴ 410
0
votes
1
reply
2.6k
views
Comment:
A: Trimmomatic not trimming the adapter
5.5 years ago by
alex.zaccaron
▴ 410
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