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DESeq2 comparing timepoints within treatment and account for background control change
RNAseq DEG DESeq2
updated 17 days ago by 43k • written 17 days ago by ▴ 30
1
vote
4
replies
438
views
Bacterial genome assembly, best uses of reads at excessively high sequencing depth?
bacteria pacbiohifi assembly coverage genome
10 weeks ago by ian.will ▴ 30
0
votes
2
replies
531
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Correlation methods giving very different results (WGCNA)
WGCNA bicor pearson
updated 4 months ago by 43k • written 4 months ago by ▴ 30
0
votes
3
replies
421
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Curated model organism gene functional annotations
Interpro C.elegans GO-terms
updated 4 months ago by ▴ 510 • written 4 months ago by ▴ 30
2
votes
9
replies
1.2k
views
Salmon (or other pseudo-mappers) for multi-species RNAseq read filtering
STAR Salmon mapper aligner RNAseq
5 months ago by ian.will ▴ 30
1
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0
replies
938
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Metabolomics Pathway Enrichment - Mummichog p value selection
enrichment mummichog metabolomics
2.1 years ago by ian.will ▴ 30
0
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0
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512
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Refs/tools for protein interactomes
Protein PSI-MI Interactome Orthologs PPI
3.0 years ago by ian.will ▴ 30
0
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0
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1.4k
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WGS upload prep - table2asn
genome Assembly genbank annotation
4.3 years ago by ian.will ▴ 30
0
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3
replies
1.7k
views
Correct alignmnent region from Circlator output mapped to orignal assembly
Assembly genome alignment circlator nanopore
updated 5.4 years ago by 35k • written 5.4 years ago by ▴ 30
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