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1.5k
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Comment:
Comment: How to use UCSC genome browser to check the transcription factor binding at your
17 months ago by
Luis Nassar
▴ 670
0
votes
0
replies
738
views
Answer:
Answer: Variant Annotation Integrator VCF File
2.8 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
2.1k
views
Answer:
Answer: bedGraphtoBigWig- Converting INSDC chromosome names to UCSC names
2.8 years ago by
Luis Nassar
▴ 670
1
vote
1
reply
2.2k
views
Answer:
Answer: How to get mm39 repeatmasker track from UCSC genome browser
3.1 years ago by
Luis Nassar
▴ 670
3
votes
1
reply
1.8k
views
Answer:
Answer: How to convert hg38 narrowpeak file to hg19 narrowpeak file
3.1 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
2.8k
views
Answer:
Answer: Pseudogenes in the human genome annotation
3.2 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
2.8k
views
Comment:
Comment: How to select a few TF binding site using JASPAR on UCSC
3.2 years ago by
Luis Nassar
▴ 670
2
votes
1
reply
2.8k
views
Answer:
Answer: How to select a few TF binding site using JASPAR on UCSC
3.2 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
1.3k
views
Answer:
Answer: Interpretting phastConsElements from USCS Table Browser
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.0k
views
Answer:
Answer: Visulization of raw 4C-seq reads in UCSC
3.2 years ago by
Luis Nassar
▴ 670
1
vote
1
reply
6.5k
views
Answer:
Answer: How to download BED file with all the fields?
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
2.0k
views
Answer:
Answer: how to to download a BED file from ucsc to directory using linux
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.8k
views
Answer:
Answer: Liftover nonmodel VCF
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.9k
views
Answer:
Answer: Annovar: Mouse database download
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.5k
views
Comment:
Comment: How to get enome feature annotation through NCBI api ?
3.2 years ago by
Luis Nassar
▴ 670
2
votes
0
replies
1.4k
views
Answer:
Answer: UCSC MySQL access
3.2 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
1.3k
views
Answer:
Answer: SNP exon region UCSC
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.1k
views
Answer:
Answer: UCSC Gene Table Exon Frames Generating Stop Codons
3.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
3.7k
views
Comment:
Comment: UCSC knownCanonical hg19 vs. hg38
3.3 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
3.7k
views
Comment:
Comment: UCSC knownCanonical hg19 vs. hg38
3.3 years ago by
Luis Nassar
▴ 670
1
vote
1
reply
3.7k
views
Comment:
Comment: UCSC knownCanonical hg19 vs. hg38
3.3 years ago by
Luis Nassar
▴ 670
2
votes
2
replies
3.7k
views
Answer:
Answer: UCSC knownCanonical hg19 vs. hg38
3.3 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
869
views
Answer:
Answer: List of codon numbers in a panel
3.3 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
3.7k
views
Answer:
Answer: GenomeInfoDb (in R) and UCSC just stopped co-operating in terms of mm10
3.3 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
2.4k
views
Answer:
Answer: UCSC liftover
3.3 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.0k
views
Answer:
Answer: How to download GTEx figure from USCS genome browser
3.3 years ago by
Luis Nassar
▴ 670
0
votes
1
reply
1.6k
views
Answer:
A: UCSC Table Browser Filter Constraints for MAF > 5%
updated 4.3 years ago by
Ram
44k • written 4.3 years ago by
Luis Nassar
▴ 670
2
votes
0
replies
3.0k
views
Answer:
A: UCSC track hub: how to best include a GTF / GFF file
4.6 years ago by
Luis Nassar
▴ 670
1
vote
1
reply
3.0k
views
Comment:
C: UCSC track hub: how to best include a GTF / GFF file
4.6 years ago by
Luis Nassar
▴ 670
0
votes
1
reply
4.4k
views
Answer:
A: KentUtils installation issue
4.7 years ago by
Luis Nassar
▴ 670
3
votes
0
replies
1.8k
views
Answer:
A: RepeatMasker data download
4.7 years ago by
Luis Nassar
▴ 670
4
votes
0
replies
1.6k
views
Answer:
A: Local installation of UCSC Genome Browser
updated 4.8 years ago by
Ram
44k • written 4.8 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
3.3k
views
Comment:
C: Quick way to annotate a target exome BED file with gene name information
4.8 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
14k
views
Comment:
C: How to download mm10 GTF file with the gene id and gene name using UCSC table br
4.8 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
1.3k
views
Answer:
A: UCSC browser track description can't be updated
4.8 years ago by
Luis Nassar
▴ 670
2
votes
0
replies
14k
views
Comment:
C: How to download mm10 GTF file with the gene id and gene name using UCSC table br
4.9 years ago by
Luis Nassar
▴ 670
6
votes
2
replies
14k
views
Answer:
A: How to download mm10 GTF file with the gene id and gene name using UCSC table br
4.9 years ago by
Luis Nassar
▴ 670
3
votes
1
reply
1.6k
views
Answer:
A: Get GC content, Conservation score and repeat fraction from UCSC?
4.9 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.2k
views
Answer:
A: Getting CDS from chromosome positions
5.0 years ago by
Luis Nassar
▴ 670
2
votes
0
replies
2.3k
views
Answer:
A: Locating telomere on a given chromosome
5.0 years ago by
Luis Nassar
▴ 670
1
vote
0
replies
1.3k
views
Answer:
A: Understanding the annotation tag
5.0 years ago by
Luis Nassar
▴ 670
2
votes
1
reply
1.1k
views
Answer:
A: UCSC Genome Browser GENCODE Subtrack Label Highlighted?
5.0 years ago by
Luis Nassar
▴ 670
3
votes
0
replies
3.1k
views
Answer:
A: GEO database - how to use their bedgraph files
5.1 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
2.9k
views
Comment:
C: Sequence mapping with reciprocal-best but not liftover chains?
5.2 years ago by
Luis Nassar
▴ 670
3
votes
1
reply
2.3k
views
Answer:
A: What does arrow+box mean in UCSC genome browser?
5.2 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
4.0k
views
Comment:
C: Gene Annotation in Bed file
5.2 years ago by
Luis Nassar
▴ 670
1
vote
1
reply
1.2k
views
Comment:
C: Multiz for human-to-mouse and mouse-to-human don't agree with each other
5.4 years ago by
Luis Nassar
▴ 670
0
votes
0
replies
1.6k
views
Comment:
C: UCSC different exome sets per each gene
5.6 years ago by
Luis Nassar
▴ 670
1
vote
1
reply
1.6k
views
Comment:
C: UCSC different exome sets per each gene
5.6 years ago by
Luis Nassar
▴ 670
0
votes
1
reply
1.6k
views
Answer:
A: UCSC different exome sets per each gene
5.6 years ago by
Luis Nassar
▴ 670
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