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Answer:
Answer: How to read a Wig file format of Histone modification
updated 24 months ago by
Ram
43k • written 9.2 years ago by
Ryan Dale
5.0k
2
votes
2
replies
4.3k
views
Answer:
Answer: interpretation of RNA secondary structure
updated 24 months ago by
Ram
43k • written 9.2 years ago by
Ryan Dale
5.0k
2
votes
0
replies
3.2k
views
Answer:
Answer: Metaseq: Average ChIP-seq signal over promoters error
updated 2.1 years ago by
Ram
43k • written 9.3 years ago by
Ryan Dale
5.0k
2
votes
2
replies
2.3k
views
Answer:
Answer: MACS usage for IgG and treatment
updated 2.2 years ago by
Ram
43k • written 9.4 years ago by
Ryan Dale
5.0k
1
vote
1
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4.7k
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Answer:
Answer: average coverage, chip-seq
updated 3.1 years ago by
Ram
43k • written 9.5 years ago by
Ryan Dale
5.0k
0
votes
0
replies
2.0k
views
Answer:
Answer: Comparisons between datasets generated at different timepoints
updated 3.1 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
4
votes
1
reply
8.0k
views
Answer:
Answer: pybedtools.BedTool.intersect not working, install problem
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
1
vote
1
reply
3.0k
views
Answer:
Answer: Pangenome visualization: flowerplot?
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
4
votes
1
reply
14k
views
Answer:
Answer: ChIP-Seq: Calling peaks with replicates
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
7
votes
1
reply
5.5k
views
Answer:
Answer: How to create Correlation plots between wig files
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
3
votes
0
replies
2.8k
views
Answer:
Answer: What is a good ChIPseq peak distance cutoff?
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
1
vote
1
reply
3.3k
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Answer:
Answer: ChIP-Seq duplicates metrics/qa
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
2
votes
0
replies
2.5k
views
Answer:
Answer: Creatig TrackHubs from BigWigs
updated 2.3 years ago by
Ram
43k • written 9.6 years ago by
Ryan Dale
5.0k
3
votes
0
replies
5.9k
views
Answer:
Answer: Drawing ChIPseq graphics
updated 2.4 years ago by
Ram
43k • written 9.7 years ago by
Ryan Dale
5.0k
1
vote
0
replies
5.5k
views
Answer:
A: Lesson Plan To Teach Python For Absolute Beginners
10.1 years ago by
Ryan Dale
5.0k
2
votes
0
replies
3.8k
views
Answer:
A: Bedgraph And Bigwig Files From Multiple Bams
10.1 years ago by
Ryan Dale
5.0k
10
votes
3
replies
8.8k
views
Answer:
A: To What Degree Could We Determine Whether A Gene Is Expressed?
10.2 years ago by
Ryan Dale
5.0k
1
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0
replies
4.8k
views
Answer:
A: How To Minimize The Bias Caused By Rna Amplification In Rna-Seq?
10.2 years ago by
Ryan Dale
5.0k
2
votes
1
reply
6.9k
views
Answer:
A: How Do You Use Cloud Computing For Bioinformatics In 2013?
10.9 years ago by
Ryan Dale
5.0k
3
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0
replies
5.0k
views
Answer:
A: Please Help Me Check My Workflow For Paired-End Sequencing
11.0 years ago by
Ryan Dale
5.0k
0
votes
0
replies
5.4k
views
Answer:
A: Rrna Removal In Rna-Seq Data
11.1 years ago by
Ryan Dale
5.0k
2
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0
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20k
views
Answer:
A: Normalized Bigwig Files
11.1 years ago by
Ryan Dale
5.0k
8
votes
1
reply
33k
views
Answer:
A: Converting Bam To Bedgraph For Viewing On Ucsc?
11.1 years ago by
Ryan Dale
5.0k
3
votes
1
reply
8.0k
views
Answer:
A: Parameters That Determine Meme Speed And Homer Speed For Motif Discovery?
11.2 years ago by
Ryan Dale
5.0k
4
votes
1
reply
19k
views
Answer:
A: Is There Any Other Method For Isoform-Level Differential Expression Analysis Exc
11.2 years ago by
Ryan Dale
5.0k
3
votes
0
replies
4.1k
views
Answer:
A: Best Practices For Pipeline Versioning
11.2 years ago by
Ryan Dale
5.0k
7
votes
0
replies
4.7k
views
Answer:
A: Why Some People Prefer To Use Ucsc Browser Instead Of Some Standalone Ones (Like
11.2 years ago by
Ryan Dale
5.0k
4
votes
0
replies
3.4k
views
Answer:
A: High Confidence Peaks From A Set Of Replicates
11.2 years ago by
Ryan Dale
5.0k
8
votes
4
replies
4.1k
views
Answer:
A: Simple Redirection, I/O Problem With Bedtools
11.3 years ago by
Ryan Dale
5.0k
4
votes
2
replies
8.0k
views
Answer:
A: Parsing Genbank Format In Bioperl.
11.3 years ago by
Ryan Dale
5.0k
4
votes
1
reply
6.6k
views
Answer:
A: Which Aligner Is Best Suited For Clip-Seq Data?
11.3 years ago by
Ryan Dale
5.0k
3
votes
1
reply
12k
views
Answer:
A: Finding Out Adapters Information In Small Rna Seq Data
updated 11.4 years ago by
Arun
2.4k • written 11.4 years ago by
Ryan Dale
5.0k
3
votes
0
replies
8.2k
views
Answer:
A: Visualizing Genomic Interactions
11.4 years ago by
Ryan Dale
5.0k
10
votes
2
replies
6.5k
views
Answer:
A: Extract Alu Repeats
11.4 years ago by
Ryan Dale
5.0k
2
votes
1
reply
17k
views
Answer:
A: Promoter Or Enhancer Regions Bed Format
11.8 years ago by
Ryan Dale
5.0k
1
vote
0
replies
2.2k
views
Answer:
A: Human Expression Compendium?
11.8 years ago by
Ryan Dale
5.0k
4
votes
0
replies
11k
views
Answer:
A: How O Assign A Color Ro Bed Regions (Ucsc)
11.8 years ago by
Ryan Dale
5.0k
1
vote
0
replies
5.4k
views
Answer:
A: Rna-Seq Raw Counts
11.9 years ago by
Ryan Dale
5.0k
0
votes
0
replies
4.6k
views
Answer:
A: Multibamcov Or Htseq-Count To Count Read Per Feature ?
11.9 years ago by
Ryan Dale
5.0k
1
vote
1
reply
2.2k
views
Answer:
A: Cutadapt Assertionerror
11.9 years ago by
Ryan Dale
5.0k
1
vote
1
reply
3.7k
views
Answer:
A: Histone Modification Database For Positive And Negative
11.9 years ago by
Ryan Dale
5.0k
5
votes
1
reply
8.5k
views
Answer:
A: Fastqc To Check The Quality Of High Throughput Sequence
11.9 years ago by
Ryan Dale
5.0k
5
votes
0
replies
3.1k
views
Answer:
A: What Situations Fit The Different Overlap Resolution Modes Of Htseq-Count/Summar
12.0 years ago by
Ryan Dale
5.0k
0
votes
0
replies
12k
views
Answer:
A: How To Read A Bigwig File Using Python
12.1 years ago by
Ryan Dale
5.0k
5
votes
0
replies
7.4k
views
Answer:
A: How To Plot/Visualise Tfbs Positions Relative To Tss For Thousands Of Genes?
12.1 years ago by
Ryan Dale
5.0k
0
votes
0
replies
24k
views
Answer:
A: How Can I Find Target Genes Of A Transcription Factor?
12.2 years ago by
Ryan Dale
5.0k
8
votes
0
replies
5.2k
views
Answer:
A: Samtools View - What'S The Purpose Of The -T Option?
12.2 years ago by
Ryan Dale
5.0k
3
votes
0
replies
35k
views
Answer:
A: Heatmaps In R With Huge Data
12.3 years ago by
Ryan Dale
5.0k
34
votes
1
reply
22k
views
Answer:
A: The Difference Between Directional And Nondirectional Sequencing
12.3 years ago by
Ryan Dale
5.0k
5
votes
0
replies
5.0k
views
Answer:
A: Datasets For Which There Is Microarray And Rna-Seq Data On The Same Samples
12.3 years ago by
Ryan Dale
5.0k
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