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5
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0
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3.3k
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Answer: A: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
12 months ago by Kamil ★ 2.1k
0
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1
reply
640
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Comment: C: file and directory management best practices
14 months ago by Kamil ★ 2.1k
1
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0
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4.3k
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Answer: A: How To Convert Hg19_Known_Gene From Text Format To Gtf Or Bed?
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.1k
3
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0
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8.3k
views
Answer: A: Obtaining Ucsc Tables Via Ftp And Converting Them To Proper Gff3 Via Genepredtog
updated 21 months ago by 34k • written 7.4 years ago by ★ 2.1k
0
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0
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3.2k
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Comment: C: pytabix - quickly retrieve rows from a table of positions or regions
updated 22 months ago by 34k • written 7.5 years ago by ★ 2.1k
2
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0
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2.4k
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Answer: A: dbSNP: minor alleles for a list of SNPs
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.1k
4
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1
reply
6.7k
views
Answer: A: Is there a fixed convention for matching dna/rna/aa letter symbols to colors?
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.1k
0
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1
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2.4k
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Comment: C: Determine if a transcription factor is bound with CENTIPEDE
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.1k
0
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0
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1.6k
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Comment: C: Export of SNP data from 1000Genomes for several hundred genes
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.1k
1
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0
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1.7k
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Answer: A: how to find snps in the 25kb upstream and downstream of one gene
updated 22 months ago by 34k • written 5.8 years ago by ★ 2.1k
3
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1
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2.6k
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Answer: A: Beagle files using the latest 1000 genomes
updated 22 months ago by 34k • written 5.9 years ago by ★ 2.1k
0
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0
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2.2k
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Answer: A: batch program to convert nucleotide into protein
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
1
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0
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1.4k
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Answer: A: Question about RNA-seq and chipseq quality table/ fig
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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0
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5.3k
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Comment: C: DNA binding site motif database
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
1
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1
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5.8k
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Answer: A: how to merge overlapping intervals in a bedgraph file
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
4
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1
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5.3k
views
Answer: A: DNA binding site motif database
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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2
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1.3k
views
Answer: A: can not get the alignment result from needle alignment
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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0
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4.8k
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Answer: A: TruSeq strand-specificity in rsem-calculate-expression
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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1
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2.9k
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Comment: C: problem with KEGG pathway gene extraction
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
3
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2
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2.9k
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Answer: A: problem with KEGG pathway gene extraction
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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0
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1.4k
views
Answer: A: Error in camera function in limma
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
3
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0
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3.3k
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Answer: A: Difference between pair alignment rate and properly paired reads
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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1
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2.9k
views
Answer: A: featureCounts/HTSeq-count problem with different annotation files
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
1
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1
reply
7.5k
views
Answer: A: paired end illumina reads
updated 23 months ago by 34k • written 6.0 years ago by ★ 2.1k
0
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0
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1.9k
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Answer: A: RNAseq project ideas for young intern with MISO?
updated 23 months ago by 34k • written 6.2 years ago by ★ 2.1k
0
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0
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1.5k
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Answer: A: Affymetrix Gene Lists?
updated 23 months ago by 34k • written 6.3 years ago by ★ 2.1k
1
vote
2
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11k
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Comment: C: ggrepel: repel overlapping text labels in ggplot2
updated 3.0 years ago by 34k • written 5.8 years ago by ★ 2.1k
17
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9
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11k
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6 follow
Tool: ggrepel: repel overlapping text labels in ggplot2
Tools R visualization
7 months ago by Kamil ★ 2.1k
0
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0
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2.8k
views
Comment: C: RNA-seq: differentially expressed genes without genome reference
updated 3.1 years ago by 34k • written 5.0 years ago by ★ 2.1k
1
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1
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2.8k
views
Answer: A: RNA-seq: differentially expressed genes without genome reference
updated 3.1 years ago by 34k • written 5.7 years ago by ★ 2.1k
15
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3
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35k
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Answer: A: Calculating TPM from featureCounts output
4.1 years ago by Kamil ★ 2.1k
5
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2
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1.5k
views
Comment: C: Tutorials for Library Normalization in DESeq2 and EdgeR
4.1 years ago by Kamil ★ 2.1k
0
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1
reply
17k
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Comment: C: Produce PCA for 1000 Genomes Phase III in VCF format
4.1 years ago by Kamil ★ 2.1k
31
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6
replies
9.8k
views
Tool: FASTA and FASTQ tools
FASTA FASTQ Python C++ Tool
4.6 years ago by Kamil ★ 2.1k
1
vote
1
reply
23k
views
Comment: C: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
4.8 years ago by Kamil ★ 2.1k
1
vote
1
reply
23k
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Comment: C: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
4.8 years ago by Kamil ★ 2.1k
1
vote
1
reply
35k
views
Comment: C: Calculating TPM from featureCounts output
5.0 years ago by Kamil ★ 2.1k
1
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0
replies
5.4k
views
Answer: A: Download Transcription Factor Targeting Genes Data
5.0 years ago by Kamil ★ 2.1k
2
votes
0
replies
25k
views
Answer: A: How To Identify Targets Of A Transcription Factor ?
5.0 years ago by Kamil ★ 2.1k
2
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0
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20k
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Answer: A: How Can I Find Target Genes Of A Transcription Factor?
5.0 years ago by Kamil ★ 2.1k
1
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0
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3.3k
views
Answer: A: quantify signal in a chromosomal interval in different .bw files
5.5 years ago by Kamil ★ 2.1k
0
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0
replies
2.3k
views
Answer: A: automated gene ontology enrichment for simple gene list (not microarray data)
5.7 years ago by Kamil ★ 2.1k
1
vote
0
replies
37k
views
Comment: C: Best Way To Normalize Rna-Seq Data For Expression Profiling
5.7 years ago by Kamil ★ 2.1k
0
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1
reply
1.5k
views
Answer: A: quick question on paired RNAseq reads
5.7 years ago by Kamil ★ 2.1k
0
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0
replies
11k
views
Comment: C: ggrepel: repel overlapping text labels in ggplot2
5.8 years ago by Kamil ★ 2.1k
0
votes
0
replies
2.4k
views
Comment: C: Determine if a transcription factor is bound with CENTIPEDE
5.8 years ago by Kamil ★ 2.1k
7
votes
8
replies
2.4k
views
Tutorial: Determine if a transcription factor is bound with CENTIPEDE
ChIP-Seq DNase-Seq transcription factor Tutorial
updated 5.8 years ago by • 0 • written 6.3 years ago by ★ 2.1k
0
votes
0
replies
2.6k
views
Comment: C: Beagle files using the latest 1000 genomes
5.9 years ago by Kamil ★ 2.1k
1
vote
1
reply
2.4k
views
Comment: C: Determine if a transcription factor is bound with CENTIPEDE
5.9 years ago by Kamil ★ 2.1k
2
votes
0
replies
1.4k
views
Answer: A: TBLASTN on a large DNA database (352GB)
6.0 years ago by Kamil ★ 2.1k
97 results • Page 1 of 2
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