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Comment: Comment: Adjust pvalue in R with different approach give me all different outcome
updated 4 days ago by 43k • written 4 days ago by ▴ 330
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4.0k
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Comment: Comment: Error in CIBERSORTx
20 days ago by Aspire ▴ 330
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1
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497
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Comment: Comment: Consensus peaksets in DiffBind - conceptual questinos
4 months ago by Aspire ▴ 330
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1.5k
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Comment: Comment: What statistical test to apply for DE after CibersortX deconvolution
7 months ago by Aspire ▴ 330
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1
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1.5k
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Comment: Comment: What statistical test to apply for DE after CibersortX deconvolution
12 months ago by Aspire ▴ 330
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845
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Comment: Comment: Brain cell type deconvolution
12 months ago by Aspire ▴ 330
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1
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1.7k
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Comment: Comment: ERROR using CIBERSORTx Docker version
12 months ago by Aspire ▴ 330
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654
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Comment: Comment: DESeq2 to compare between samples
2.2 years ago by Aspire ▴ 330
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1
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1.2k
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Comment: Comment: What is the range that Solexa quality scores can take?
2.5 years ago by Aspire ▴ 330
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1.6k
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Comment: Comment: How to check which genes affect a continuous phenotype
2.6 years ago by Aspire ▴ 330
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1
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1.6k
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Comment: Comment: How to check which genes affect a continuous phenotype
2.6 years ago by Aspire ▴ 330
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2
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1.6k
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Comment: Comment: How to check which genes affect a continuous phenotype
2.7 years ago by Aspire ▴ 330
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2
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1.2k
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Comment: Comment: What QC measures to look for when performing deconvolution?
2.8 years ago by Aspire ▴ 330
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1
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857
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Comment: Comment: Gene filtering based on Coefficient of Variation > 50%
2.8 years ago by Aspire ▴ 330
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1
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2.5k
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Comment: Comment: Purpose of bamCoverage RPKM normalization method
2.9 years ago by Aspire ▴ 330
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11k
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Comment: Comment: correct way of analyzing cell proportions in singlecell data
2.9 years ago by Aspire ▴ 330
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3.1k
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Comment: Comment: DESeq2 count matrix read in
3.0 years ago by Aspire ▴ 330
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1
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2.1k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
3.0 years ago by Aspire ▴ 330
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1.1k
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Comment: Comment: Cellular deconvolution intuition
3.0 years ago by Aspire ▴ 330
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1
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3.6k
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Comment: Comment: How to get output of annotated genes from ChIPseeker tool
3.0 years ago by Aspire ▴ 330
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1.2k
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Comment: Comment: Help generating multiple annotations under one H3K27me3 peak
3.1 years ago by Aspire ▴ 330
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1
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1.7k
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Comment: Comment: A mismatch between DiffBind's results and the same results retreieved as DESeq2
3.1 years ago by Aspire ▴ 330
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1
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2.1k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
3.1 years ago by Aspire ▴ 330
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1
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1.7k
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Comment: Comment: A mismatch between DiffBind's results and the same results retreieved as DESeq2
3.1 years ago by Aspire ▴ 330
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1
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2.1k
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Comment: Comment: What are the necessary and sufficient conditions for applying a multiple hypothe
3.1 years ago by Aspire ▴ 330
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1
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834
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Comment: C: How can the assumption of a broad/narrow peak be checked?
3.1 years ago by Aspire ▴ 330
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1
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2.6k
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Comment: C: A question on the interpretation of a PCA plot
3.2 years ago by Aspire ▴ 330
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1
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3.8k
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Comment: C: Are MACS2's summit or DiffBind's summit options are recommended for histone mark
3.2 years ago by Aspire ▴ 330
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1.3k
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Comment: C: Why does it make sense to use gene symbols instead of gene ids in enrichment sof
3.3 years ago by Aspire ▴ 330
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0
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2.4k
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Comment: C: Does DiffBind correctly designate peaks with very small fold-change to be signif
3.3 years ago by Aspire ▴ 330
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2
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2.4k
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Comment: C: Does DiffBind correctly designate peaks with very small fold-change to be signif
3.3 years ago by Aspire ▴ 330
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1
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2.4k
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Comment: C: Does DiffBind correctly designate peaks with very small fold-change to be signif
3.3 years ago by Aspire ▴ 330
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1
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2.4k
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Comment: C: Does DiffBind correctly designate peaks with very small fold-change to be signif
3.3 years ago by Aspire ▴ 330
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1
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1.7k
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Comment: C: Very generally speaking, what are valid criteria to decide that a sample is an o
3.3 years ago by Aspire ▴ 330
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1.7k
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Comment: C: Very generally speaking, what are valid criteria to decide that a sample is an o
3.3 years ago by Aspire ▴ 330
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0
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7.8k
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Comment: C: How do I use Diffbind as a complete beginner?
3.3 years ago by Aspire ▴ 330
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2.0k
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Comment: C: Is there a reasonable way to rank peaks that are common between replicates?
3.3 years ago by Aspire ▴ 330
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1
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3.8k
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Comment: C: ChIP-seq or Cut and Run Differential Binding Analysis
3.4 years ago by Aspire ▴ 330
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3.8k
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Comment: C: ChIP-seq or Cut and Run Differential Binding Analysis
3.4 years ago by Aspire ▴ 330
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0
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2.0k
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Comment: C: Is there a reasonable way to rank peaks that are common between replicates?
3.4 years ago by Aspire ▴ 330
1
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1
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2.0k
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Comment: A: Is there a reasonable way to rank peaks that are common between replicates?
3.4 years ago by Aspire ▴ 330
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0
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3.4k
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Comment: C: Handling replicates in Chip-seq
3.4 years ago by Aspire ▴ 330
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0
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1.2k
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Comment: C: Should the number of significantly DE genes rise with the number of SVs estimate
3.5 years ago by Aspire ▴ 330
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1
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1.2k
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Comment: C: Should the number of significantly DE genes rise with the number of SVs estimate
3.5 years ago by Aspire ▴ 330
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0
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1.1k
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Comment: C: Weird results in TopHat2 paired-end alignment
3.5 years ago by Aspire ▴ 330
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1
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1.2k
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Comment: C: Providing R1,R2 to macs2
3.5 years ago by Aspire ▴ 330
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1.2k
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Comment: C: Providing R1,R2 to macs2
3.5 years ago by Aspire ▴ 330
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1
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1.2k
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Comment: C: Providing R1,R2 to macs2
3.5 years ago by Aspire ▴ 330
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0
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1.1k
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Comment: C: Weird results in TopHat2 paired-end alignment
3.6 years ago by Aspire ▴ 330
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0
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627
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Comment: C: separating dataset by a specific character
3.6 years ago by Aspire ▴ 330
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