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Comment: Comment: Read spatial data from GSM8557976 using Seurat
11 days ago by fracarb8 ★ 1.7k
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3
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2.7k
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Has the TRON Expression Atlas closed?
RNA-Seq cell-line
updated 6 months ago by • 0 • written 6.4 years ago by ★ 1.7k
1
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1
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1.3k
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Comment: Comment: Assigning cell annotation based on calculated scores.
8 months ago by fracarb8 ★ 1.7k
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0
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1.4k
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Comment: Comment: After doublet detection in 10x scRNA-Seq data, there is still evidence of double
8 months ago by fracarb8 ★ 1.7k
1
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1
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900
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Answer: Answer: Do i need to regressout uninteresting sources of variation bebofe pseudobul DESe
11 months ago by fracarb8 ★ 1.7k
1
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0
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1.1k
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Comment: Comment: Extracting normalized counts from RDS (Seurat) file
14 months ago by fracarb8 ★ 1.7k
1
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0
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3.3k
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Comment: Comment: why R scripts are preferred than biopython for RNA-Seq analyses?
15 months ago by fracarb8 ★ 1.7k
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0
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1.3k
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Comment: Comment: Seurat v5 SCTransform warning messages (I consistently get 50 warnings)
15 months ago by fracarb8 ★ 1.7k
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0
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2.6k
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Comment: Comment: DoubletFinder error
16 months ago by fracarb8 ★ 1.7k
2
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1
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3.1k
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Comment: Comment: How to reassign the orientation of clusters in pheatmap
16 months ago by fracarb8 ★ 1.7k
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0
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2.8k
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Comment: Comment: Conversion of Gene Name to Ensembl ID
16 months ago by fracarb8 ★ 1.7k
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0
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841
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Comment: Comment: Monocle3 - gene expression dot plot (ggplot2 equivalent)
16 months ago by fracarb8 ★ 1.7k
0
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1
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1.6k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
17 months ago by fracarb8 ★ 1.7k
1
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0
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6.2k
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Comment: Comment: Single-cell ambient RNA correction: SoupX vs decontX contamination fraction
17 months ago by fracarb8 ★ 1.7k
1
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1
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1.6k
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Comment: Comment: Single cell analysis: Unable to subset cells in seurat object using desired nFea
17 months ago by fracarb8 ★ 1.7k
0
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1
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1.2k
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Comment: Comment: What is a good way to do gene differentials in single cell data where one group
17 months ago by fracarb8 ★ 1.7k
0
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1
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1.4k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
17 months ago by fracarb8 ★ 1.7k
0
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1
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1.4k
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
18 months ago by fracarb8 ★ 1.7k
2
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1
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1.4k
views
Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
18 months ago by fracarb8 ★ 1.7k
0
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1
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1.0k
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Comment: Comment: Addmetadata to seurat obj
19 months ago by fracarb8 ★ 1.7k
2
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0
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1.2k
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Comment: Comment: Ubuntu storage space is decreasing automatically
19 months ago by fracarb8 ★ 1.7k
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0
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2.1k
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Comment: Comment: cloupe to 10x format
19 months ago by fracarb8 ★ 1.7k
1
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1
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2.1k
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Answer: Answer: cloupe to 10x format
19 months ago by fracarb8 ★ 1.7k
2
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1
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2.0k
views
Answer: Answer: change order of violin plots in ggplot2
updated 19 months ago by 45k • written 19 months ago by ★ 1.7k
1
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1
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6.5k
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
19 months ago by fracarb8 ★ 1.7k
0
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0
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1.2k
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Answer: Answer: ArchR Doublet Inference to Signac
19 months ago by fracarb8 ★ 1.7k
2
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1
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1.0k
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
19 months ago by fracarb8 ★ 1.7k
2
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1
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908
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Comment: Comment: compare dimplot(single cell)
19 months ago by fracarb8 ★ 1.7k
3
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0
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773
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Answer: Answer: Doplot to display 2 metadata variables
19 months ago by fracarb8 ★ 1.7k
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0
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6.1k
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
19 months ago by fracarb8 ★ 1.7k
1
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1
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6.1k
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
19 months ago by fracarb8 ★ 1.7k
0
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1
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6.1k
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
19 months ago by fracarb8 ★ 1.7k
0
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0
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2.1k
views
Answer: Answer: Error in changing the annotation color of pheatmap
20 months ago by fracarb8 ★ 1.7k
1
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1
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838
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
20 months ago by fracarb8 ★ 1.7k
0
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0
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1.7k
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
20 months ago by fracarb8 ★ 1.7k
1
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0
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1.7k
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
20 months ago by fracarb8 ★ 1.7k
0
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0
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1.2k
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
20 months ago by fracarb8 ★ 1.7k
0
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0
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2.4k
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Answer: Answer: Speed up FindClusters execution?
20 months ago by fracarb8 ★ 1.7k
0
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1
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1.3k
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Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
20 months ago by fracarb8 ★ 1.7k
1
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1
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14k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
21 months ago by fracarb8 ★ 1.7k
0
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1
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2.3k
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Comment: Comment: Is it necessary to integrate again samples when subclustering
21 months ago by fracarb8 ★ 1.7k
0
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0
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1.6k
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
22 months ago by fracarb8 ★ 1.7k
2
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1
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3.1k
views
Comment: Comment: How to remove center population from seurat cluster
23 months ago by fracarb8 ★ 1.7k
2
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2
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3.1k
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Comment: Comment: How to remove center population from seurat cluster
23 months ago by fracarb8 ★ 1.7k
0
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1
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1.2k
views
Comment: Comment: convert dataframe R
23 months ago by fracarb8 ★ 1.7k
2
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1
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1.2k
views
Answer: Answer: convert dataframe R
23 months ago by fracarb8 ★ 1.7k
3
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0
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7.8k
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Comment: Comment: Cellcyclescoring did not work in Seurat V5
23 months ago by fracarb8 ★ 1.7k
0
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1
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1.2k
views
Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
23 months ago by fracarb8 ★ 1.7k
0
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0
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5.6k
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Answer: Answer: DoubletFinder for Python?
23 months ago by fracarb8 ★ 1.7k
2
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0
replies
2.8k
views
Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
2.0 years ago by fracarb8 ★ 1.7k
220 results • Page 1 of 5
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