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Answer: Answer: seurat-creating heatmaps
2.0 years ago by fracarb8 ★ 1.7k
0
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1
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5.9k
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Comment: Comment: Unable to save plots in R using jpeg() or png()
2.0 years ago by fracarb8 ★ 1.7k
2
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1
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3.2k
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Answer: Answer: Bioinformatics software for single cell omics
2.0 years ago by fracarb8 ★ 1.7k
0
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0
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10k
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Comment: Comment: Code for reading h5ad files in R
2.0 years ago by fracarb8 ★ 1.7k
0
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1
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10k
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Answer: Answer: Code for reading h5ad files in R
2.1 years ago by fracarb8 ★ 1.7k
0
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0
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955
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Comment: Comment: Monocle3 garnett
2.1 years ago by fracarb8 ★ 1.7k
1
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0
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1.4k
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Answer: Answer: How to get ncol = nrow?
updated 2.1 years ago by 45k • written 2.1 years ago by ★ 1.7k
1
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1
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1.2k
views
Comment: Comment: How to determine the total count for each gene in lymphotype B
2.1 years ago by fracarb8 ★ 1.7k
0
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1
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1.2k
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Comment: Comment: How to determine the total count for each gene in lymphotype B
2.1 years ago by fracarb8 ★ 1.7k
1
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1
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908
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Comment: Comment: Is it normal if regress out the cell cycle effects but the DEGs are quite the si
2.1 years ago by fracarb8 ★ 1.7k
1
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0
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3.4k
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Answer: Answer: Is there an easy to modify the subplot titles in DimPlot (Seurat)?
updated 2.1 years ago by 45k • written 2.1 years ago by ★ 1.7k
2
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0
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1.6k
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Answer: Answer: Add samples IDs to Seurat object when integrating different samples to do differ
updated 2.1 years ago by 45k • written 2.1 years ago by ★ 1.7k
1
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1
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1.2k
views
Comment: Comment: Dotplot error: subscript out of bound
2.1 years ago by fracarb8 ★ 1.7k
1
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0
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5.5k
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Answer: Answer: How do I install DSSP?
2.1 years ago by fracarb8 ★ 1.7k
0
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0
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3.9k
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Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
2.1 years ago by fracarb8 ★ 1.7k
0
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1
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3.9k
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Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
2.1 years ago by fracarb8 ★ 1.7k
2
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2
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3.9k
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Answer: Answer: Selecting MOUSE gene set libraries in Enrichr
2.1 years ago by fracarb8 ★ 1.7k
1
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1
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1.4k
views
Comment: Comment: Converting scMultiome data to loom using SEURAT
2.2 years ago by fracarb8 ★ 1.7k
1
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0
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1.7k
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Answer: Answer: UMAP graph using DimPlot pre/post integration
2.2 years ago by fracarb8 ★ 1.7k
1
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1
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1.8k
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Comment: Comment: Optimal number of features to use when integrate multi samples by Seurat in sc
2.2 years ago by fracarb8 ★ 1.7k
0
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0
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4.0k
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Comment: Comment: Negative Expression in RNA Assay on Dot Plot After SCT Transform
2.2 years ago by fracarb8 ★ 1.7k
0
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1
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4.0k
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Answer: Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
2.2 years ago by fracarb8 ★ 1.7k
0
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0
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8.5k
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Answer: Answer: InferCNV results interpretation
2.2 years ago by fracarb8 ★ 1.7k
1
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0
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1.9k
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Answer: Answer: Can I using scVI to integrate data, then using R to conduct following analysis?
2.2 years ago by fracarb8 ★ 1.7k
1
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0
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3.8k
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Answer: Answer: Change transparency/alpha in seurat's vlnPlot()
2.2 years ago by fracarb8 ★ 1.7k
1
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0
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1.1k
views
Answer: Answer: HeatMap, R, Rownames
2.3 years ago by fracarb8 ★ 1.7k
0
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1
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2.2k
views
Answer: Answer: How to obtain cell-cell interaction list
2.3 years ago by fracarb8 ★ 1.7k
0
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0
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2.5k
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Comment: Comment: Housekeeping genes scRNA seq
2.3 years ago by fracarb8 ★ 1.7k
0
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2
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3.3k
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Comment: Comment: scrna seq analysis - doublets
2.3 years ago by fracarb8 ★ 1.7k
5
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1
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5.4k
views
Answer: Answer: In Scanpy, how to RDS file and merge it with other Scanpy objects.
2.3 years ago by fracarb8 ★ 1.7k
7
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0
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13k
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Answer: Answer: Convert Human to Mouse Symbols
2.3 years ago by fracarb8 ★ 1.7k
0
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0
replies
1.5k
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Answer: Answer: Uploading 10x Data into R for Monocle 3
2.4 years ago by fracarb8 ★ 1.7k
0
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0
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1.2k
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Answer: Answer: What kind of statistical test does Cellranger count use?
2.4 years ago by fracarb8 ★ 1.7k
0
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0
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2.7k
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Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
2.4 years ago by fracarb8 ★ 1.7k
2
votes
0
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8.0k
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Answer: Answer: Seurat 'DoHeatmap()' hierarchical clustering
2.4 years ago by fracarb8 ★ 1.7k
0
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0
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1.6k
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Comment: Comment: Seurat PlotClusterTree together with heatmap of gene expression
2.5 years ago by fracarb8 ★ 1.7k
0
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0
replies
1.0k
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Comment: Comment: Remove string from Seurat Object
2.5 years ago by fracarb8 ★ 1.7k
0
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0
replies
39k
views
Comment: Comment: How to get subset of a Seurat object based on metadata?
2.6 years ago by fracarb8 ★ 1.7k
0
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1
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39k
views
Answer: Answer: How to get subset of a Seurat object based on metadata?
2.6 years ago by fracarb8 ★ 1.7k
1
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0
replies
2.0k
views
Comment: Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
2.6 years ago by fracarb8 ★ 1.7k
0
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1
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2.0k
views
Answer: Answer: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
2.7 years ago by fracarb8 ★ 1.7k
0
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1
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5.2k
views
Comment: Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
2.7 years ago by fracarb8 ★ 1.7k
0
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1
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5.2k
views
Answer: Answer: How to solve a possible memory issues with Seurat and IntegrateData step?
2.7 years ago by fracarb8 ★ 1.7k
0
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1
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1.8k
views
Comment: Comment: How to use ClusterProfiler
2.7 years ago by fracarb8 ★ 1.7k
1
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0
replies
738
views
Comment: Comment: Font name used in dittoSeq?
2.7 years ago by fracarb8 ★ 1.7k
2
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1
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1.1k
views
Comment: Comment: R bug during normalize
2.7 years ago by fracarb8 ★ 1.7k
0
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1
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1.1k
views
Answer: Answer: exchange the monocle data with Seurat
2.7 years ago by fracarb8 ★ 1.7k
1
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0
replies
1.3k
views
Comment: Comment: HLA typing with archasHLA - DNA seq?
2.8 years ago by fracarb8 ★ 1.7k
1
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0
replies
1.5k
views
Comment: Comment: bash script error to copy files from multiple directories to one directory
2.9 years ago by fracarb8 ★ 1.7k
2
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1
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1.5k
views
Answer: Answer: bash script error to copy files from multiple directories to one directory
2.9 years ago by fracarb8 ★ 1.7k
220 results • Page 2 of 5
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