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Answer: Answer: Pick Random regions inside genes
4.0 years ago by Papyrus ★ 3.1k
2
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1.2k
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Answer: Answer: Per base sequence Quality in Fast QC report
4.0 years ago by Papyrus ★ 3.1k
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3.0k
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Comment: Comment: How to use MACS2 output for DESEQ2 differential analysis during ATAC-seq? How to
4.0 years ago by Papyrus ★ 3.1k
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Answer: Answer: Database for Enhancers with Coordinates
4.0 years ago by Papyrus ★ 3.1k
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1.0k
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Comment: Comment: microarray dataset input into metascape
4.0 years ago by Papyrus ★ 3.1k
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2.0k
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Comment: Comment: Row names and probe names does not match in topTable output
4.0 years ago by Papyrus ★ 3.1k
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2.0k
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Comment: Comment: Row names and probe names does not match in topTable output
4.0 years ago by Papyrus ★ 3.1k
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1.4k
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Comment: Comment: RRBS data analysis using Bismark and methylkit
4.0 years ago by Papyrus ★ 3.1k
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6.6k
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Comment: Comment: Difference in Bismark output methylation call files and coverage files
4.0 years ago by Papyrus ★ 3.1k
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1
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2.8k
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Comment: Comment: Methylkit (differential methylation analysis) error in data frame
4.0 years ago by Papyrus ★ 3.1k
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2.8k
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Comment: Comment: Methylkit (differential methylation analysis) error in data frame
4.0 years ago by Papyrus ★ 3.1k
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2.8k
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Comment: Comment: Methylkit (differential methylation analysis) error in data frame
4.0 years ago by Papyrus ★ 3.1k
2
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1.1k
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Answer: Answer: Batch Correction While Batch Numbers and Labels Match
4.0 years ago by Papyrus ★ 3.1k
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7.2k
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Answer: Answer: Changing colour labels of samples with pheatmap
4.0 years ago by Papyrus ★ 3.1k
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2.7k
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Comment: Comment: Cluster Profiler- enrichGO
4.0 years ago by Papyrus ★ 3.1k
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1
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2.7k
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Comment: Comment: Cluster Profiler- enrichGO
4.0 years ago by Papyrus ★ 3.1k
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1
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1.4k
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Comment: Comment: methylation beta distribution (minfi generated)
4.1 years ago by Papyrus ★ 3.1k
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1
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2.8k
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Comment: Comment: how to combine either Rna-seq datasets or results from analysis of Rna-seq datas
4.1 years ago by Papyrus ★ 3.1k
1
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2
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2.8k
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Answer: Answer: how to combine either Rna-seq datasets or results from analysis of Rna-seq datas
4.1 years ago by Papyrus ★ 3.1k
3
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1.3k
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Answer: Answer: adjusting for confounding factors in Spearman correlation?
4.1 years ago by Papyrus ★ 3.1k
0
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1.9k
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Comment: Comment: How to plot/combine biological replicates on a genomic features plot for methyla
4.1 years ago by Papyrus ★ 3.1k
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4.9k
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Comment: Comment: Tools for bulk RNA-seq celltype deconvolution
4.1 years ago by Papyrus ★ 3.1k
2
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1
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1.9k
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Answer: Answer: How to plot/combine biological replicates on a genomic features plot for methyla
4.1 years ago by Papyrus ★ 3.1k
0
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0
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2.2k
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Comment: Comment: R package for filtering expression data
4.1 years ago by Papyrus ★ 3.1k
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1
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2.2k
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Comment: Comment: R package for filtering expression data
4.1 years ago by Papyrus ★ 3.1k
3
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1
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1.6k
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Answer: Answer: What cut-offs to use for Genomic Features Pie Chart for Methylation Array Data?
4.1 years ago by Papyrus ★ 3.1k
1
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0
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4.0k
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Comment: Comment: directionality of RRBS
4.1 years ago by Papyrus ★ 3.1k
1
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0
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1.1k
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Answer: Answer: Helper packages for differential gene expression analysis in R
4.1 years ago by Papyrus ★ 3.1k
0
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1
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1.6k
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Comment: Comment: Minfi - estimateCellCounts
4.2 years ago by Papyrus ★ 3.1k
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1
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1.6k
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Comment: Comment: Minfi - estimateCellCounts
4.2 years ago by Papyrus ★ 3.1k
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1
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1.6k
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Comment: Comment: Obtaining gene specific annotations for mouse genes
4.2 years ago by Papyrus ★ 3.1k
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1
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1.6k
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Comment: Comment: Obtaining gene specific annotations for mouse genes
4.2 years ago by Papyrus ★ 3.1k
0
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1
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4.9k
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Comment: Comment: Tools for bulk RNA-seq celltype deconvolution
4.2 years ago by Papyrus ★ 3.1k
2
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0
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6.5k
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Answer: Answer: Searching a venn diagram online tool
4.2 years ago by Papyrus ★ 3.1k
2
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0
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2.4k
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Comment: Comment: Which covariates include in the differential expression analysis
4.2 years ago by Papyrus ★ 3.1k
1
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0
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719
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Comment: Comment: Ranking treatment replicates from differential expression
4.2 years ago by Papyrus ★ 3.1k
1
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0
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2.6k
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Comment: Comment: Tools for screening the influence/importance of covariates in multidimensional d
4.2 years ago by Papyrus ★ 3.1k
6
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7
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2.6k
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Tools for screening the influence/importance of covariates in multidimensional data
R PCA confounding batch regression
4.2 years ago by Papyrus ★ 3.1k
2
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0
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2.6k
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Answer: Answer: Tools for screening the influence/importance of covariates in multidimensional d
4.2 years ago by Papyrus ★ 3.1k
0
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0
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3.7k
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Answer: Answer: Handling manhattan plots in vector graphics editors
4.2 years ago by Papyrus ★ 3.1k
1
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1
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1.7k
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Comment: Comment: how to detect non CpG methylation probes ?
4.2 years ago by Papyrus ★ 3.1k
1
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1
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1.7k
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Comment: Comment: GSEA - Strange Results interpretation - Error in DESEQ2 ?
4.2 years ago by Papyrus ★ 3.1k
2
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1
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1.7k
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Answer: Answer: how to detect non CpG methylation probes ?
4.2 years ago by Papyrus ★ 3.1k
0
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0
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1.1k
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Answer: Answer: Circular plot for RNA seq - methylation data
4.2 years ago by Papyrus ★ 3.1k
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0
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2.2k
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Comment: Comment: what does very low estimates but a significant P value mean.
4.2 years ago by Papyrus ★ 3.1k
3
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0
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8.8k
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Answer: Answer: What exactly should and shouldn't go in Combat's model matrix?
4.3 years ago by Papyrus ★ 3.1k
0
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1
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8.8k
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Comment: Comment: What exactly should and shouldn't go in Combat's model matrix?
4.3 years ago by Papyrus ★ 3.1k
0
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1
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8.8k
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Comment: Comment: What exactly should and shouldn't go in Combat's model matrix?
4.3 years ago by Papyrus ★ 3.1k
0
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0
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4.0k
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Comment: Comment: directionality of RRBS
4.3 years ago by Papyrus ★ 3.1k
0
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1
reply
2.2k
views
Comment: Comment: what does very low estimates but a significant P value mean.
4.3 years ago by Papyrus ★ 3.1k
343 results • Page 4 of 7
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