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Comment: Comment: directionality of RRBS
4.4 years ago by Papyrus ★ 3.1k
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2
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4.2k
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Comment: Comment: directionality of RRBS
4.4 years ago by Papyrus ★ 3.1k
2
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1
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4.2k
views
Comment: Comment: directionality of RRBS
4.4 years ago by Papyrus ★ 3.1k
2
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1
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4.2k
views
Comment: Comment: directionality of RRBS
4.4 years ago by Papyrus ★ 3.1k
1
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1
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2.4k
views
Comment: Comment: what does very low estimates but a significant P value mean.
4.4 years ago by Papyrus ★ 3.1k
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2
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3.0k
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Comment: Comment: Logfold change (Limma Package) in methylation association studies
4.4 years ago by Papyrus ★ 3.1k
2
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1
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2.4k
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Answer: Answer: what does very low estimates but a significant P value mean.
4.4 years ago by Papyrus ★ 3.1k
1
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0
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15k
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Comment: Comment: Extract rows name in R
4.4 years ago by Papyrus ★ 3.1k
3
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1
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15k
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Answer: Answer: Extract rows name in R
4.4 years ago by Papyrus ★ 3.1k
0
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0
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3.0k
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Comment: Comment: Gene expression RNASeq
4.4 years ago by Papyrus ★ 3.1k
1
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1
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3.0k
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Answer: Answer: Gene expression RNASeq
4.4 years ago by Papyrus ★ 3.1k
0
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1
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3.0k
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Comment: Comment: Logfold change (Limma Package) in methylation association studies
4.4 years ago by Papyrus ★ 3.1k
0
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1
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3.0k
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Answer: Answer: Logfold change (Limma Package) in methylation association studies
4.4 years ago by Papyrus ★ 3.1k
1
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1
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1.6k
views
Comment: Comment: circular R plot
4.4 years ago by Papyrus ★ 3.1k
1
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1
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9.7k
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Answer: Answer: What exactly should and shouldn't go in Combat's model matrix?
4.4 years ago by Papyrus ★ 3.1k
0
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0
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4.4k
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Comment: Comment: Regression assumptions - fitted and residual plots
4.4 years ago by Papyrus ★ 3.1k
0
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1
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4.4k
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Comment: Comment: Regression assumptions - fitted and residual plots
4.4 years ago by Papyrus ★ 3.1k
0
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1
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4.4k
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Comment: Comment: Regression assumptions - fitted and residual plots
4.5 years ago by Papyrus ★ 3.1k
3
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0
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7.0k
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Comment: Comment: fixed effect vs random effects RNA analysis
4.5 years ago by Papyrus ★ 3.1k
1
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0
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1.4k
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Answer: Answer: Problem with universe values for GO categories in EnrichGO
4.5 years ago by Papyrus ★ 3.1k
0
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0
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2.8k
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Comment: Comment: Tools for screening the influence/importance of covariates in multidimensional d
4.5 years ago by Papyrus ★ 3.1k
0
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1
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2.1k
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Comment: Comment: Batch effects and differential expression analysis on TCGA data for cancer subty
4.5 years ago by Papyrus ★ 3.1k
0
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0
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983
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Comment: Comment: Conflict result between RNA-seq and Western-Blot
4.5 years ago by Papyrus ★ 3.1k
1
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1
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1.7k
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Answer: Answer: Remove unknown batch effect in microarrays data
4.5 years ago by Papyrus ★ 3.1k
0
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1
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2.8k
views
Comment: Comment: Tools for screening the influence/importance of covariates in multidimensional d
4.5 years ago by Papyrus ★ 3.1k
1
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1
reply
3.4k
views
Comment: Comment: How to choose one TSS for a gene
4.5 years ago by Papyrus ★ 3.1k
0
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1
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2.5k
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Comment: Comment: RRBS ANNOTATION
4.5 years ago by Papyrus ★ 3.1k
1
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1
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2.5k
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Comment: Comment: RRBS ANNOTATION
4.5 years ago by Papyrus ★ 3.1k
1
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1
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2.5k
views
Comment: Comment: RRBS ANNOTATION
4.5 years ago by Papyrus ★ 3.1k
0
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0
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3.4k
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Answer: Answer: Future of Microarrays
4.5 years ago by Papyrus ★ 3.1k
0
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0
replies
3.4k
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Comment: Comment: ATAC-Seq: Filter bams for differential analysis or not
4.6 years ago by Papyrus ★ 3.1k
0
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1
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3.4k
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Comment: Comment: ATAC-Seq: Filter bams for differential analysis or not
4.6 years ago by Papyrus ★ 3.1k
1
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1
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5.0k
views
Comment: Comment: Batch effects prevention
4.6 years ago by Papyrus ★ 3.1k
1
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0
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5.0k
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Comment: Comment: Batch effects prevention
4.6 years ago by Papyrus ★ 3.1k
0
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0
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1.9k
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Comment: Comment: "MethylKit" package for WGBS data
4.6 years ago by Papyrus ★ 3.1k
1
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1
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1.9k
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Answer: Answer: "MethylKit" package for WGBS data
4.6 years ago by Papyrus ★ 3.1k
0
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0
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2.7k
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Comment: C: ATAC-seq FastQC showing 5' sequence content bias
4.7 years ago by Papyrus ★ 3.1k
3
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2
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2.7k
views
ATAC-seq FastQC showing 5' sequence content bias
ATAC-seq fastqc
updated 4.7 years ago by 89k • written 4.7 years ago by ★ 3.1k
0
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0
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2.8k
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Comment: C: Understanding 'destrand' option in Bioconductor MethylKit
4.7 years ago by Papyrus ★ 3.1k
1
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1
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2.8k
views
Answer: C: Understanding 'destrand' option in Bioconductor MethylKit
4.8 years ago by Papyrus ★ 3.1k
0
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0
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3.1k
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Comment: C: Too many Terms after Enrichment analysis
4.8 years ago by Papyrus ★ 3.1k
1
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0
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2.1k
views
Comment: C: Should I cluster and PCA the whole sample or only the genes of interest?
4.8 years ago by Papyrus ★ 3.1k
1
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1
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2.1k
views
Answer: A: Should I cluster and PCA the whole sample or only the genes of interest?
4.8 years ago by Papyrus ★ 3.1k
2
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0
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4.4k
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Comment: C: Why enrichGO does not return any enrichment terms?
4.8 years ago by Papyrus ★ 3.1k
0
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1
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4.4k
views
Comment: C: Why enrichGO does not return any enrichment terms?
4.8 years ago by Papyrus ★ 3.1k
0
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0
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1.1k
views
Comment: C: How to check if the diference between several logfc differential expression resu
4.8 years ago by Papyrus ★ 3.1k
0
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1
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2.0k
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Comment: C: Expression thresholds for enrichment analysis of RNA-Seq data
4.8 years ago by Papyrus ★ 3.1k
0
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2
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2.0k
views
Comment: C: Expression thresholds for enrichment analysis of RNA-Seq data
4.8 years ago by Papyrus ★ 3.1k
0
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0
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1.5k
views
Surrogate variable, celltype composition correction and overfitting in DNA methylation data
array sva limma methylation
4.8 years ago by Papyrus ★ 3.1k
0
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1
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2.1k
views
Comment: C: Prop.test for multiple rows/or full matrix and get p.values ?
4.9 years ago by Papyrus ★ 3.1k
343 results • Page 5 of 7
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