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Comment: C: How can we define the compound in KEGG KGML file .
9.9 years ago by Cyriac Kandoth 6.1k
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Answer: Answer: Tcga: "Tumor, Matched Normal" Vs. "Normal, Matched Tumor"
updated 3.8 years ago by 45k • written 11.1 years ago by 6.1k
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Answer: Answer: TCGA 2011 Ovarian Data Germline BRCA1/2 status
updated 3.0 years ago by 45k • written 10.0 years ago by 6.1k
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1
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2.2k
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Answer: A: Genome MuSic Mutation Relation RUntimes
10.0 years ago by Cyriac Kandoth 6.1k
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1
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3.8k
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Comment: Comment: Mutations Not Recognized in MuSiC
updated 3.0 years ago by 45k • written 10.1 years ago by 6.1k
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10k
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Comment: Comment: MAF (minor allele frequency) calculation for finding rare variants from TCGA
updated 3.6 years ago by 45k • written 10.9 years ago by 6.1k
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10k
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Answer: Answer: MAF (minor allele frequency) calculation for finding rare variants from TCGA
updated 3.6 years ago by 45k • written 10.9 years ago by 6.1k
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1
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3.0k
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Answer: Answer: Tollaly confused about finding variants allel frequencies.
updated 3.0 years ago by 45k • written 10.1 years ago by 6.1k
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1
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3.8k
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Comment: C: Mutations Not Recognized in MuSiC
10.1 years ago by Cyriac Kandoth 6.1k
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2.3k
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Answer: Answer: Using Music When Silent Mutation Is Excluded In Data
updated 4.5 years ago by 45k • written 11.1 years ago by 6.1k
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5.6k
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Comment: Comment: How to get SNP genotypes in somatic mutation files with MAF(Mutation Annotation
updated 2.8 years ago by 45k • written 10.2 years ago by 6.1k
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2.3k
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Comment: C: Why the AT_covd CG_covg CpG_covd is zero???what happened with them?
10.2 years ago by Cyriac Kandoth 6.1k
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2.8k
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Answer: Answer: genome music bmr calc-covg-helper
updated 2.8 years ago by 45k • written 10.2 years ago by 6.1k
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59k
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Comment: C: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
10.2 years ago by Cyriac Kandoth 6.1k
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59k
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Comment: C: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
10.3 years ago by Cyriac Kandoth 6.1k
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1
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5.1k
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Comment: C: Protein database for TCGA MAF files
10.3 years ago by Cyriac Kandoth 6.1k
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1
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5.1k
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Answer: Answer: Protein database for TCGA MAF files
updated 2.7 years ago by 45k • written 10.3 years ago by 6.1k
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1
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3.4k
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Answer: Answer: TCGA database call SNP
updated 2.7 years ago by 45k • written 10.3 years ago by 6.1k
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3.4k
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Comment: Comment: TCGA database call SNP
updated 2.7 years ago by 45k • written 10.3 years ago by 6.1k
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3.6k
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Comment: Comment: who can give me the data of genome music bmr calc-covg
updated 2.7 years ago by 45k • written 10.3 years ago by 6.1k
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1
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16k
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Comment: C: calculate z-score from rpkm values.
10.3 years ago by Cyriac Kandoth 6.1k
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3.9k
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Comment: Comment: calcroicovg problem genome
updated 2.7 years ago by 45k • written 10.3 years ago by 6.1k
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1
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3.9k
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Comment: C: calcroicovg problem genome
10.3 years ago by Cyriac Kandoth 6.1k
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1
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3.6k
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Comment: C: who can give me the data of genome music bmr calc-covg
10.3 years ago by Cyriac Kandoth 6.1k
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1
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2.7k
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Comment: Comment: Individual Vertical Analysis from TCGA Data
updated 2.6 years ago by 45k • written 10.4 years ago by 6.1k
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0
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13k
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Comment: C: problems with MAF for MutSigCV (vcf2maf)
10.4 years ago by Cyriac Kandoth 6.1k
2
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1
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3.5k
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Answer: Answer: TCGA Wiggle files for MuSiC
updated 3.2 years ago by 45k • written 10.4 years ago by 6.1k
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1
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3.9k
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Answer: Answer: calcroicovg problem genome
updated 3.2 years ago by 45k • written 10.4 years ago by 6.1k
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0
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3.1k
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Comment: C: MuSiC installation on Mac, Module Genome error
10.4 years ago by Cyriac Kandoth 6.1k
3
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2
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3.1k
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Answer: Answer: MuSiC installation on Mac, Module Genome error
updated 3.2 years ago by 45k • written 10.4 years ago by 6.1k
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1
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59k
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 4.0 years ago by 45k • written 11.3 years ago by 6.1k
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0
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2.5k
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Answer: A: Genome MuSiC calcRoiCovg crashing
10.5 years ago by Cyriac Kandoth 6.1k
1
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0
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59k
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
updated 3.4 years ago by 45k • written 10.5 years ago by 6.1k
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0
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12k
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Comment: C: Obtain MAF from VCF
10.5 years ago by Cyriac Kandoth 6.1k
1
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1
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12k
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Answer: A: Obtain MAF from VCF
10.5 years ago by Cyriac Kandoth 6.1k
2
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1
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9.2k
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Answer: A: Variant Filtration And Surprising Results
10.5 years ago by Cyriac Kandoth 6.1k
2
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1
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3.8k
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Answer: Answer: How can I look at nonsense mutations in a particular gene in TCGA data?
updated 3.4 years ago by 45k • written 10.6 years ago by 6.1k
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0
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3.5k
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Answer: Answer: Is there any database that can link the germline/somatic variant to cancer targe
updated 3.4 years ago by 45k • written 10.6 years ago by 6.1k
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0
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3.1k
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Comment: Comment: Annotating a VCF [FORMAT not INFO field]
updated 3.5 years ago by 45k • written 10.6 years ago by 6.1k
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3.5k
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Comment: Comment: Is there any database that can link the germline/somatic variant to cancer targe
updated 3.4 years ago by 45k • written 10.6 years ago by 6.1k
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21k
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Comment: C: Vcf To Maf (Mutation Annotation Format) Conversion ?
10.7 years ago by Cyriac Kandoth 6.1k
1
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1
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3.7k
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Answer: Answer: is needed info (BAM and MAF) files for normal tissues in MUSIC?
updated 3.5 years ago by 45k • written 10.7 years ago by 6.1k
4
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1
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4.7k
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Answer: Answer: how can I get MAF stratified by subpopulation for ASW, or CEU and YRI
updated 3.5 years ago by 45k • written 10.7 years ago by 6.1k
2
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0
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6.5k
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Answer: Answer: TCGA data gene expression
updated 3.5 years ago by 45k • written 10.7 years ago by 6.1k
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1
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4.8k
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Comment: Comment: Consistency of clinical data from TCGA (melanoma)
updated 3.5 years ago by 45k • written 10.7 years ago by 6.1k
2
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1
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5.1k
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Answer: Answer: The variance gene for normal people as the control set compared with TCGA gene m
updated 3.8 years ago by 45k • written 10.9 years ago by 6.1k
0
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0
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16k
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Comment: Comment: Retreiving Data From Tcga Database
updated 3.5 years ago by 45k • written 10.8 years ago by 6.1k
3
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1
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16k
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Comment: Comment: Retreiving Data From Tcga Database
updated 3.5 years ago by 45k • written 10.8 years ago by 6.1k
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0
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5.3k
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Comment: C: How to determine whether a gene is present or absent?
10.8 years ago by Cyriac Kandoth 6.1k
0
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0
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3.1k
views
Answer: A: Problem in music bmr coverage
10.8 years ago by Cyriac Kandoth 6.1k
280 results • Page 3 of 6
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